Pimephales promelas (fathead minnow): 120472752
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Entry
120472752 CDS
T08155
Name
(RefSeq) voltage-dependent R-type calcium channel subunit alpha-1E isoform X1
KO
K04852
voltage-dependent calcium channel R type alpha-1E
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04010
MAPK signaling pathway
pprm04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120472752
04020 Calcium signaling pathway
120472752
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pprm04040
]
120472752
Ion channels [BR:
pprm04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
120472752
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
120472752
NCBI-ProteinID:
XP_039518527
LinkDB
All DBs
Position
Unknown
AA seq
2451 aa
AA seq
DB search
MLELGTCSVSAQTLSDRNALEVPSFGQGVCGGSLPPRCFLLQPKDPESWLKHRGTLEDGS
LTCSLLEPQRLSDSFLYHASSFDTLYVPHAHPMCLAPSSLDLGGSCEGAAALGLDPDMPV
SPNIINRRRGGLIEQRDIIKAHQAHKIHSTPQARRKEWEMARFGDDVPGLLGAGDGGSER
SRNRDAPAVSTGGVSPAFKQTKAQRARTMALYNPIPVRQNCFTVNRSLFIFGEDNIVRKY
AKKITEWPPFEYMILATIIANCIVLALEQHLPEEDKTPMSKRLEKTEPYFIGMFCLEAGI
KVIALGFAFHKGSYLRNGWNVMDFIVVLSGILATAGAHMNISLDLRTLRAVRVLRPLKLV
SGIPSLQIVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFYSGKLHRQCVPGTKSKAGH
TLTNLSESDQCGFKKCAENFTCNDEWPGPNDGITQFDNILFSILTVFQCITMEGWTAILY
YTNDALGPTWNWLYFIPLIIIGSFFVLNLVLGVLSGEFAKERERVENRRAFMKLRRQQQI
ERELNGYRAWIDRAEEVMLAEESKNSGPSALDVLKRATTIKRRGVDDVRRAPEEQYADIS
SVGMPLNRVSIRSAKRGPTSYFQRKERMLRISIRRMVKTHTFYWIVLGLVALNTLCVAIV
HHNQPPWLSSLLYYAEFLFLGLFLTEMFLKMYGLGPRLYFHSSFNCFDCGVIIGSIFEVL
WGFFRPGTSFGISVLRALRLLRIFKVTKYWASLRNLVVSLMNSMKSIISLLFLLFLFIVV
FALLGMQVFGGRFNFEDYTPTNFDTFPAAIMTVFQILTGEDWNEVMYSGIRSQGGVKSGM
WSSVYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEEEEEAAFNQKHALQKAKEVGP
MSSFMCSERRRRPYLYRKRAIHRSRAAYSFEDSESLADARPLNASNSFMSRRERRRRMTM
SVWEQRTSQLRRHRQMSSREILFSSPSEEHDGPPGCDHHQTTEISPSDSKHRAIETTTTT
AMPEATLEPPIPMDMPGDEQSQSISIPEPPLAIPIPEPPMPADISLPEPPVTLNLPLTEP
SESKTSPEHSLDNNHCPRLNGNRRQRAVRKYRPPAMGDTLTPDMWPRSRRPRHRESHTDA
RGKETQQGDDGVDSREQRPGNEGDEKESKNDGGISPDGRVLERRQNKPDNSESEPKPVNS
PCKNPPQDSEPATLQLTESTLQHSPQRTMGAGETDNNNHKSLNLDKSSLNTSIMIEVTDT
QPSMELTSITGNSKDMEDSKPEKEEEETPDAPKAPIPVSMFIFKPDNPVRRACHYIVNLR
YFEMSILLVITASSIALAAEDPVNTNSDRNKVLRYFDYVFTGVFTFEMIIKMIELGLILH
DGSYFRDLWNILDFVVVVGALVAFALTNVMGSNTGRDIKTIKSLRVLRVLRPLKTIKRLP
KLKAVFDCVVTSLKNVFNILIVYKLFMFIFAVIAVQLFKGKFYYCTDSSKDTENECKGYY
IDYDKEKKKEKREWKRHDFHYDNVIWALLTLFTVSTGEGWPQVLQHSVDVTEEDRGPSQG
NRMEMSIFYVIYFVVFPFFFVNIFVALIIITFQEQGDKMMEECSLEKNERACIDFAISAK
PLTRYMPQNKHTLQYRLWHFVVSPLFEYTVLTMIALNTIVLMMKHHDPRPKDYEDVLKYL
NTVFTVIFSVECLLKILAFGVMNYFRDTWNIFDFITVLGSIAEIAVEKLLSDKPFSMGFL
KLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIKLN
EKSQINSHNNFKSFFGALMLLFRSATGESWQEIMLSCLGEKECEIDNSIPLSNLTKGIKK
DCGTDFAYFYFVSFIFFSSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFIRIWGEYD
RAACGRIHYTDMYEMLTCMSPPLGLGKKCPSKLAYKRLVLMNMPVDEDMSVHFTSTLMAL
IRTALDIKIARGGEDRGQMDVELQKEISVIWPHLSQKSLDFLVPINKASDMTIGKIYAAM
MIMDYYKQNKAKKLRQQLEEQKHAPMFQRMDASSLPQDILCSAKAMPFLSHSAGSALTRG
GFVALSPISPQDFFMQPLGQDSMEEREEYQHHYHLQSMVPEHKEFSSVMCPSSMQADPLQ
VPGRGVSIRASSMPRLEVEPQQVSSESKLMKRSFSTIGDQCVNGDWQEEFSLERVSPDRL
ERPRQRSFRAVRSNLREPVDKERGRSKERRHLLSPDVSRCNSEERSQSQERHHSRSPSEG
RKHTTLRPGNSSSSPIPSTSDSGTPRGRRQLPKTPSRPRPHISYSPLVCRANPELGEARS
KAKPAEEGGEPTGSGPGTALAHSTPQRYISEPYLTLQEDVNSPDSTGVEETLTFEAAIAT
SLGRSNTISSAPQLRHTWQVPNGHLRKRLGQATSGTSGCELLSDTDEDDRC
NT seq
7356 nt
NT seq
+upstream
nt +downstream
nt
atgttggaattgggcacgtgttcggtcagcgctcagaccctctctgaccgtaatgccctg
gaagtcccgtctttcggtcagggcgtgtgtggtgggagcttacccccgcgatgtttcctc
ctccagcccaaggacccggagagctggctcaagcaccggggaaccctggaagacggctcc
ctcacctgttctctcctggagccccagagactgtctgacagtttcctgtaccatgcatct
agtttcgatacactttacgtcccccacgcccacccgatgtgtctggcaccatcctccctg
gatctgggtgggtcatgcgagggggcggccgcgttgggtctggaccccgacatgcccgtc
agcccaaatatcattaacagacgcagggggggacttattgaacaacgggacatcattaaa
gcacatcaggcgcacaagatccacagcaccccacaggcccggcgaaaggaatgggaaatg
gctcgcttcggagacgatgttcccggtctgctgggagccggggatgggggctcggagcgc
agtcggaaccgggatgctcctgcggtatccacaggtggagtttcaccagccttcaaacag
accaaagcgcagcgagctcgaactatggctctgtacaaccccatcccagttcgacagaac
tgcttcaccgtcaacagatcgctctttatctttggagaggacaacatcgttaggaagtat
gctaagaagatcacagaatggcctccgtttgaatacatgatcctggccaccattatcgcc
aactgcatcgtcctggccttggaacagcacctgcctgaagaggacaagacacccatgtca
aagagacttgaaaaaacagagccctacttcataggaatgttttgcttagaagctggaata
aaagtcattgctttgggatttgcattccacaagggctcgtacctgcggaacggctggaac
gtgatggacttcattgtcgttctgagtgggattctggccacagcaggagcccatatgaat
atttcattagacctgcgaacgctgagggctgtgagggtattacggccccttaaactggtt
tctggcattcctagtctgcaaatagttctgaaatccataatgaaggcaatggtgccactg
ctacagattggtctgctgctgttttttgccattctcatgtttgccattattggactagag
ttttacagtggaaaactccacaggcaatgtgtaccaggcactaaaagtaaagcgggtcac
acactgacaaacttatctgaatctgatcaatgtgggttcaagaaatgtgctgaaaatttt
acctgcaatgacgaatggcccggacccaatgatggcatcactcagtttgataacatccta
ttttccatactcactgtcttccagtgcatcaccatggaagggtggacagccatactctat
tataccaacgatgccttaggccctacatggaattggctctacttcattcctctaataata
attggctccttctttgtcttgaatctggtattaggagtcctgtcaggagagtttgccaaa
gagcgtgagagagtggagaaccgaagggctttcatgaagctgaggagacagcagcagatc
gagagggagctgaacgggtatcgggcctggattgaccgtgcagaggaggttatgcttgca
gaagagagcaagaattcaggaccttctgctttagatgtgctaaaaagagccaccaccata
aagagaagaggggtggatgatgttcggagagctccagaggaacagtatgctgacatctcg
tctgtagggatgccattgaacagagtcagcatacgcagtgctaaacgaggacctacatcc
tatttccagcggaaagaacgcatgctacggatctccattcggcgtatggtgaagactcac
accttctactggattgttctgggtctggtggccctcaacactctttgtgtagccatcgta
catcacaatcaacctccgtggttgtctagtcttctctactatgcagaattcctgtttctg
ggtctgtttcttactgagatgtttctgaagatgtatggactcgggcccagactctatttc
cactcatcctttaactgctttgattgtggggtgataatagggagcatttttgaggtactc
tgggggttcttcagacctggcacatcctttgggatcagcgttctgcgtgccttgcggttg
ttgagaattttcaaggtcaccaagtactgggcatccctgaggaacctggttgtatctctg
atgaactccatgaagtccattatcagtttgctcttcctgcttttcctcttcattgtggtc
tttgcactgctgggcatgcaggtctttggtggaaggttcaattttgaagactatacacca
actaattttgacacttttccagcagccatcatgacagtgtttcaaattctcactggcgag
gactggaatgaagtcatgtacagtggcatccggtctcaaggtggagtgaagtcagggatg
tggtcatctgtctacttcattgttctgactttgtttggaaattatacactactcaacgtc
ttcttggctatcgctgttgacaatttggccaatgcccaggagctcacaaaggatgaagag
gaggaggaagcggcgtttaatcagaaacatgccctgcaaaaagccaaggaggttgggccc
atgtcctctttcatgtgctcagagaggaggaggaggccctacctgtacagaaagcgtgca
attcaccggagccgtgcggcctactccttcgaggattcggagagtctggctgatgctcgt
ccactcaatgcctctaactctttcatgtccaggagagagagaaggaggaggatgactatg
tcagtttgggagcagaggaccagccaactgcgccgccacaggcagatgtccagccgtgag
atccttttcagcagcccgagtgaagagcacgatggaccacctggctgcgatcaccaccag
accacagagatatctccatctgacagcaagcacagagccatcgagaccactacaaccact
gccatgccggaggctaccttagagccacccatacctatggacatgcctggggatgagcaa
tctcagtccatttctatccccgaaccccctttagcgattccaataccagagccaccaatg
cctgcagacatatcccttcctgaacccccagtgacgctgaatctacccttaacagagccg
tctgaatcaaagacctcacccgagcattctctagacaacaaccattgccccagactgaat
gggaacaggcggcagcgggcagtccgtaagtacaggcctcctgcgatgggggacacacta
acccctgatatgtggcccagatcccgacgcccacgccaccgtgaatctcacacagatgca
aggggcaaagagacacaacagggagatgatggtgttgacagtagagaacaaaggcctggg
aatgagggagatgaaaaggaatcaaagaatgatggagggatcagtccagatggcagagtg
cttgaacggaggcagaacaaaccagacaactctgaatcagagccaaaaccagttaattcc
ccctgcaaaaacccacctcaggactcagaacctgcaactctacagctcactgagagcaca
ctccagcattccccacagcgcactatgggtgccggcgagacagataacaacaaccacaaa
tctttgaatctggataagtcatcccttaacaccagcatcatgatagaagtcaccgacact
cagccatccatggagctgacctccattacgggtaatagtaaagacatggaggactcaaag
ccagagaaagaagaagaggaaaccccagatgcgcccaaagcccctatacctgtcagcatg
ttcatcttcaaacccgacaacccggtccgcagggcctgccactacattgtcaatcttcgt
tatttcgagatgtcaatccttcttgtgatcactgccagcagtatcgctttggctgccgaa
gaccccgtcaacactaattcggacaggaacaaagtgctgcgatattttgattatgtgttc
actggcgttttcacgtttgaaatgataatcaagatgattgagctgggtttgatcttacat
gatggctcctatttccgtgacttgtggaacattctggatttcgtagttgtggtgggagct
ctggtggcctttgctctaacgaatgtgatggggagtaacacaggaagagacattaaaacc
atcaaatcattgcgtgtgcttagagtgttgaggcctctcaagactattaaaagacttccc
aaactcaaggccgtttttgactgtgtggtcacatcgctaaagaatgtcttcaacatcctc
atcgtctacaagctctttatgttcatatttgctgtcattgccgtgcagcttttcaaaggg
aaattttactactgtactgacagttccaaggacacagaaaacgagtgcaagggttactac
attgactatgacaaagaaaagaaaaaggagaaacgagaatggaaaagacatgatttccat
tatgataacgtcatctgggccctgttgactctctttacggtatccactggggaagggtgg
cctcaagttctgcaacactctgtggatgtgactgaggaggaccggggtcccagtcagggg
aacaggatggagatgtccatcttctatgtcatttattttgtggtgttcccattcttcttc
gtcaacatattcgtggccctcatcatcattaccttccaagagcagggcgataaaatgatg
gaggagtgcagtctggagaaaaacgagagggcttgtatcgactttgccatcagtgccaaa
cctttgactcgctacatgccccagaacaaacataccttacagtatcggctgtggcacttt
gtggtgtcacccttatttgagtacaccgtgctgacgatgattgccctgaacaccatcgtt
ctcatgatgaagcatcatgatccccgtcctaaagactatgaagatgtgctaaaatacctc
aacactgtgttcactgttattttctctgtggaatgtcttctcaagatcctggcgtttggt
gtcatgaattatttcagagacacatggaatatatttgacttcatcacggttctaggaagc
attgctgaaattgcggttgaaaaattgctgagtgacaaaccttttagtatgggctttctt
aagctattccgggcagctcggctgattaaacttctgcgtcagggctacaccatccgtatt
ctgctctggacctttgtccagtccttcaaggctcttccgtatgtctgtttgctcatcgcc
atgctgtttttcatatatgccatcattggcatgcaggtattcggcaacatcaagctaaat
gaaaaaagccaaatcaactcgcacaataactttaaatcattctttggtgcactcatgctg
ttgttcaggagtgcaacaggtgagtcatggcaggaaatcatgttatcgtgtttaggagag
aaggagtgtgaaatagacaactcaattcctctcagcaacttaacaaaggggataaaaaaa
gattgtggaaccgactttgcatacttctactttgtatccttcatcttcttcagttctttt
ttgatgctgaatctgtttgtggctgtgatcatggataattttgagtacctgacacgtgac
tcgtccattctgggtcctcaccacttggatgagtttatacggatctggggagagtatgac
cgcgcagcatgtggccgtattcattacactgatatgtacgagatgctgacctgcatgtcg
ccaccgcttggtctgggcaagaaatgcccctccaaattggcgtataagcggttggttctg
atgaacatgccagtggatgaggacatgtccgttcatttcacctccacacttatggccctg
atacgcacggcactggacattaaaatcgctcgaggaggtgaggacaggggtcagatggat
gtagaattgcagaaggaaatcagtgtcatctggccacacctctcccagaaatctcttgat
tttcttgtacccattaacaaagccagtgacatgaccattgggaagatctatgcagctatg
atgatcatggactactacaagcagaacaaagctaagaagctccgtcaacagcttgaagaa
cagaaacatgcgccgatgttccaacgcatggatgcatcctcactgccacaggacattctc
tgcagtgccaaggctatgccgttcctgtcccacagtgcaggatctgctctcactaggggt
gggtttgtggcactgagtcccatctcccctcaagatttcttcatgcagcccttgggccaa
gacagcatggaggagagggaggaataccaacaccactatcacctccagagcatggtgcca
gagcacaaagaatttagcagtgtgatgtgccccagtagcatgcaggctgatcctctgcaa
gtgccagggagaggcgtctctatccgagcctcttccatgcctcgcctggaggtagagcca
cagcaggtatcttcagagagcaaactgatgaagcgttcattctccacgattggtgatcag
tgtgtgaatggtgactggcaggaagagttctctctggagagggtgagccctgaccgactg
gagagacccagacaaagaagcttcagagctgtcagatcaaacctgcgggagccagtggac
aaggagagaggacggtctaaagagcgaagacacctgctgtctccagacgtgtctcgatgt
aactcagaggaaaggagtcagtcccaggagagacaccactctcggtcacccagtgagggc
aggaagcacacaaccctcagaccgggaaatagttcaagcagcccaattccctccacttct
gattcagggacgcctcgagggcgtcggcaactcccaaagacaccttctcgtcctcggccc
cacatctcctactctcctttagtgtgccgtgccaatcccgagctgggggaggctcggtca
aaggccaagcctgcagaggaagggggggagccaaccgggtctggccctggcaccgccctg
gcccactccacccctcaacgatacatctcagagccatacctgacactgcaagaggatgtt
aacagtccagactcaaccggtgtggaggagactctcactttcgaggctgccatagcaacc
agcctgggccgctcgaacaccatcagttctgccccacaactacgtcacacctggcaggtg
cctaatggacatttacgtaaacgactaggacaagctacgtctgggacgtcaggctgtgag
cttctcagtgacactgatgaggatgaccggtgttag
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integrated database retrieval system
