Pimephales promelas (fathead minnow): 120472989
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Entry
120472989 CDS
T08155
Symbol
tsku
Name
(RefSeq) tsukushin isoform X1
KO
K08130
tsukushi
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pprm00535
]
120472989 (tsku)
Proteoglycans [BR:
pprm00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
120472989 (tsku)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRR_LRWD1
LRR_14
LRR_EndoS
LRRNT
LRR_RPS2
Motif
Other DBs
NCBI-GeneID:
120472989
NCBI-ProteinID:
XP_039518545
LinkDB
All DBs
Position
Unknown
AA seq
350 aa
AA seq
DB search
MLTMATLLCLFFSVLGLAVIGAVKNCHPQCRCEVESFGLFDSFSLTKVDCSGIGPGNAPV
PIPLDTSHLDLSLNSITSISDSMLSGPGYTTLVSLDLSSNAIAHVSPKAFSKLRYLETLD
LSNNALEGLGDGCFTGLPLVELDLSENQFKEFSLDLFTTRAQDIPIMVDLSQNLLTAINR
RTPGHPLYIKSLMLAGNRLKTVPTLTGIPLQYLNLDGNLISSIDAGAFDSMTELVHLSLS
GLSVLSLIQPGAFRGLRNLQVLDLSNNSRLKTLSPDVFSGLVSLQELHLSNTPVTPLSRT
VFTQMPSIKSITLGSNVHCWKTHKQGQFHRQIGQAKPNDILTCDNAGMIL
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgctcaccatggcgacattgctgtgtctcttcttctctgtgcttggcctggctgtcatt
ggagcagtgaagaactgccatccgcagtgccgttgtgaggtggagagcttcggcctcttc
gacagtttcagcctgaccaaagtggactgcagtgggatcgggcccggcaacgctcctgtc
cccatccctctggacacctcccatctcgacctgtccttaaactccatcacatccatcagc
gattcgatgctctcaggaccaggttacaccacattggtcagtctggacctaagcagcaat
gccatagcacacgtcagtcccaaagcgttctctaaacttcgttatctggagacgttggac
ttgagcaacaacgctcttgagggtcttggcgatgggtgtttcactggactccctctcgtt
gagctggacctgagtgaaaaccaattcaaagagttcagccttgatctcttcaccaccaga
gcacaggatataccaatcatggtggacctgtcgcaaaaccttctgaccgccataaacagg
aggacgcctggccatccgctgtacatcaagagtcttatgcttgcagggaacagattgaag
acggtcccaacgcttaccggaatcccacttcagtatctcaacctggatgggaacctcatc
tccagcattgacgcaggggcctttgattcgatgacagaactggttcacctgtctctcagc
ggcctgtctgtcctgagcttgattcaaccaggtgctttcaggggtttgaggaacctgcag
gtcttagacttatcaaacaacagccggctcaagacgttgagcccagatgtatttagcgga
ctcgtctctttacaagagctccatttgtccaatactccggtcacaccattatcaaggacc
gtctttacccagatgccaagcataaagagtataactcttgggtcaaacgtgcactgctgg
aagacacacaaacaaggacagtttcacagacagattggacaggcaaaacccaatgatata
cttacctgtgacaatgcaggaatgatcttatga
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