Pimephales promelas (fathead minnow): 120473068
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Entry
120473068 CDS
T08155
Symbol
slc27a1a
Name
(RefSeq) long-chain fatty acid transport protein 1a isoform X1
KO
K08745
solute carrier family 27 (fatty acid transporter), member 1/4 [EC:6.2.1.-]
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03320
PPAR signaling pathway
pprm04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
120473068 (slc27a1a)
09158 Development and regeneration
04382 Cornified envelope formation
120473068 (slc27a1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pprm01004
]
120473068 (slc27a1a)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pprm02000
]
120473068 (slc27a1a)
Lipid biosynthesis proteins [BR:
pprm01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
120473068 (slc27a1a)
Transporters [BR:
pprm02000
]
Solute carrier family (SLC)
SLC27: Fatty acid transporter
120473068 (slc27a1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
120473068
NCBI-ProteinID:
XP_039518626
LinkDB
All DBs
Position
Unknown
AA seq
647 aa
AA seq
DB search
MHYVASGSLSFGSMGLLRLFGASWTWSIAAGLGVYLGTGGWRYLYVVVRTAKRDINGLYV
LLRVKLALWHHIRHRNTIPSIFAQTVAKHPDKPALVYEATGETWTFCQLDQISNAVAHWA
LSQGWTSGDVVALFMESRPLQVALWLGLAKVGVEAALINFNLRKDSLLHCVGVSASRGMV
FGAELADALSEVSSSLSETMVRFSTGDLSPDQMAALKCQPLDPILASSPRHSPPCTVSKG
FSDRLFYIYTSGTTGLPKAAIVVHSRYYRIAAFGYHSFRMRPDDIIYDCLPLYHSAGNIM
GVGQCLIHGITVVVKKRFSASRFWEDCIKHNCTVVQYIGEICRYLLSQPVRPTERQHRVR
LAVGNGLRPSVWEAFVERFGVKQIGEFYGATECNCSIANMDGKVGACGFNSRILPNVYPI
RLVKVNEETMELVRDKQGLCVTCRPGEPGLLVGRINQEDPLRRFDGYASQDATRKKIAYN
VFRKNDSAYLSGDVLVMDELGYMYFRDRSGDTFRWKGENISTTEVEGTLSSLLGQIDVAV
FGVNVPGAEGKAGMAAIADSTGRFNCNSFLREVQQALPPYARPVFLRISPCVDTTGTFKI
QKTRLQREGYDPRLTTDQIYFLNSRAGRYELVNEELYSAFEEGRISL
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgcactatgtggcgagtggctccctgtccttcggttctatgggcctgctccgtctgttt
ggggcatcttggacctggagcattgcagcaggtctgggagtttatttaggaacgggaggc
tggcggtacctgtatgtggttgttcgaacggctaaaagggacatcaatgggctttatgtg
ctgctgagggtcaaactggcgctatggcatcatatccgtcacagaaacaccataccctcc
atctttgcacaaaccgtggctaaacacccagacaagcctgcgctcgtgtatgaagccact
ggggaaacatggactttctgccagttagatcagatctccaatgctgtggcccattgggca
ctgagccagggctggacctcaggagatgtggtggcgctcttcatggagagccggccgctc
caagtggcgctctggcttggcctggccaaagtaggtgtggaggctgcgctcattaacttc
aacctccgaaaggattcgctcctgcactgcgtgggtgtgtcagcatcccgaggaatggtg
tttggagcagagctagcggacgccctgtctgaagtgagctcttccttgagtgagaccatg
gtgcggttcagcaccggagacctcagtccagaccagatggccgctctgaaatgtcagcct
cttgaccccattctggcatcttcccctcgacactcaccaccgtgcactgtgtccaagggc
ttcagcgatcgtttgttctatatctacacttctggcaccactggacttcctaaggctgct
atagtggtgcacagtcggtattacaggattgctgctttcgggtaccattcttttcgtatg
cggccagacgacatcatctatgactgtttacccctctaccactcagcagggaatattatg
ggtgtgggccagtgtctgattcacggtataaccgtggtggtcaagaagaggttctctgca
agtcgcttctgggaagactgtatcaaacataactgcactgttgtgcagtacattggcgag
atttgccgttacctgctgtcccagcctgtgcggcccacggagcgacagcaccgggtgcgt
ttggctgtggggaacgggctgcggccgagcgtgtgggaagccttcgtggagcgctttggg
gtaaaacagattggcgagttctatggagccaccgagtgcaactgcagcattgccaatatg
gatggcaaggttggagcttgtgggtttaacagtcgcattcttcctaatgtgtaccccatt
cgactggtgaaagtgaacgaggaaaccatggaactggttcgggacaagcagggactgtgt
gtgacttgccgacctggagagcctgggttgttggtggggagaattaatcaggaggatcct
ctgcgtcggtttgatggatacgctagtcaggatgccaccaggaagaagatcgcctacaat
gtgtttaggaaaaatgactctgcttatctgtcaggtgatgttttagttatggatgagctt
ggatacatgtacttccgagaccggagtggggacacgtttcgttggaaaggtgagaacatc
tccactactgaagtggaaggaacactgagcagcctgttgggacagattgatgtagcagtg
tttggagtaaatgtaccaggtgcggagggaaaagccggaatggcagccatcgctgactca
acaggaagatttaactgtaattctttcctgagagaagttcagcaagcacttcctccatac
gcacggccagtatttctacgcatctccccatgtgtagataccacaggaacatttaaaatt
cagaagaccagattgcagagagaaggatacgatccacggctcacaactgaccagatctac
tttctgaactccagagcaggccgttacgagcttgtgaacgaggagctgtacagtgctttt
gaagaaggcaggatatccctttga
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