Pimephales promelas (fathead minnow): 120473135
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Entry
120473135 CDS
T08155
Symbol
tpma
Name
(RefSeq) tropomyosin alpha-1 chain isoform X1
KO
K10373
tropomyosin 1
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04260
Cardiac muscle contraction
pprm04261
Adrenergic signaling in cardiomyocytes
pprm04814
Motor proteins
pprm04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
120473135 (tpma)
04820 Cytoskeleton in muscle cells
120473135 (tpma)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
120473135 (tpma)
04261 Adrenergic signaling in cardiomyocytes
120473135 (tpma)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pprm04812
]
120473135 (tpma)
04147 Exosome [BR:
pprm04147
]
120473135 (tpma)
Cytoskeleton proteins [BR:
pprm04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
120473135 (tpma)
Exosome [BR:
pprm04147
]
Exosomal proteins
Exosomal proteins of microglial cells
120473135 (tpma)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tropomyosin
Laminin_II
CLZ
Crescentin
ATG16
TMF_DNA_bd
Lebercilin
DUF3450
PUMA_CC
DUF745
Laminin_I
EzrA
CENP-F_leu_zip
SlyX
MscS_porin
DUF1664
DUF16
DUF4200
Motif
Other DBs
NCBI-GeneID:
120473135
NCBI-ProteinID:
XP_039518742
LinkDB
All DBs
Position
Unknown
AA seq
284 aa
AA seq
DB search
MDAIKKKMQMLKLDKENALDRAEQAEGDKKGAEDRSKQLEDDLVALQKKLKGTEDELDKY
SEALKDAQEKLELAEKKAADAESDVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAA
DESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIVEAELERTE
ERAELNEGKCSELEEELKTVTNTMKSLEAQAEKYSAKEDKYEEEIKVLTDKLKEAETRAE
FAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSI
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggatgccattaagaagaagatgcagatgctcaagctcgacaaggagaatgccttggac
agagcagagcaggctgagggcgataagaagggagcagaggacagaagcaaacagcttgag
gatgacctggtcgccctgcagaagaaactgaagggaactgaggatgagttggacaaatac
tccgaggcccttaaggatgctcaggaaaaactggagctggctgagaagaaagctgccgat
gctgagagcgacgtcgcttccctgaacagacgcatccagctggttgaggaggagttggat
cgcgctcaggagcgtctggccactgctctgcagaagctggaggaggctgagaaggctgct
gatgagagcgagagaggcatgaaggtcattgagaacagggccctgaaggatgaggagaag
atggagctgcaggagatccagttgaaggaggccaagcacattgctgaggaggctgaccgc
aagtatgaggaggtggcccgtaagctggtgattgttgaggctgagctggagcgtactgag
gagcgtgctgagctcaatgagggcaagtgctctgagctggaggaggagttgaaaactgtg
accaacaccatgaagtctctggaggcccaggctgagaagtactccgctaaggaggacaaa
tatgaggaggagatcaaggtcttgactgacaagctgaaggaggctgagactcgtgctgag
ttcgctgagagatcagtcgccaagcttgagaagaccattgatgatctggaggatgaattg
tatgctcagaaactcaagtacaaagccatcagcgaggagctggaccacgctctcaatgac
atgacctccatttaa
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integrated database retrieval system
