Pimephales promelas (fathead minnow): 120473199
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Entry
120473199 CDS
T08155
Symbol
cdx1a
Name
(RefSeq) homeobox protein CDX-1a
KO
K09312
homeobox protein CDX1/4
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120473199 (cdx1a)
Transcription factors [BR:
pprm03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
120473199 (cdx1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
Caudal_act
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
120473199
NCBI-ProteinID:
XP_039518847
LinkDB
All DBs
Position
Unknown
AA seq
231 aa
AA seq
DB search
MSVSFLLDTAMYGNPAARHLNLGHQPHLNYPSAPYPDYSGYHPGPALGNDLHHTGSSWSP
GFGPGLREEWPPLYGHGTGHSLPANGVEVNVIPQVDQAQLEREEPQDWMRRAAGPGNTGG
KTRTKDKYRVVYSDVQRLELEKEFHFSRYITIRRKAELAGALSLSERQVKIWFQNRRAKE
RKINKKRLQQAQQSSTSTPPSMPSHTSATMVSSTNNALMTDNISATIKEEY
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtgagcttcctgctggacacggccatgtacggcaaccccgccgcgagacacctg
aacctcggccaccagcctcacctgaactacccgtctgccccgtacccggactacagcggg
taccacccgggtcctgccctcgggaatgacctgcatcacaccggcagctcgtggagtccc
ggcttcggcccgggtttgcgtgaagagtggccgccgctctatggtcacgggacgggtcac
tcgctgccggctaacggcgtggaggtcaacgtcattccgcaagtggatcaggcgcagctg
gagagagaagagccgcaggactggatgagacgagccgcgggtcccgggaacactggaggg
aagacgcggacgaaggacaaataccgagtggtgtacagtgacgttcagcgcctggagctg
gagaaggaatttcatttcagccgatacatcaccatcagaaggaaggcggagctcgccgga
gccctcagcctatcagaacgccaggtgaagatctggtttcagaacagaagagccaaagaa
aggaaaataaacaagaagcgactgcaacaggcccagcagagctctacatccactcctccc
agcatgcccagtcacaccagcgccaccatggtctccagcaccaacaacgctttgatgaca
gacaatatatcggccaccattaaagaggaatactga
DBGET
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