Pimephales promelas (fathead minnow): 120473204
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Entry
120473204 CDS
T08155
Name
(RefSeq) macrophage colony-stimulating factor 1 receptor-like
KO
K05090
macrophage colony-stimulating factor 1 receptor [EC:
2.7.10.1
]
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04010
MAPK signaling pathway
pprm04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120473204
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
120473204
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pprm01001
]
120473204
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
pprm04090
]
120473204
Enzymes [BR:
pprm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
120473204
Protein kinases [BR:
pprm01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
120473204
CD molecules [BR:
pprm04090
]
Proteins
120473204
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
Ig_2
ig
C2-set_2
VEGFR-1-like_Ig-like
VEGFR1-3_N_Ig-like
Ig_VEGFR-1-like_5th
Syndecan
Motif
Other DBs
NCBI-GeneID:
120473204
NCBI-ProteinID:
XP_039518852
LinkDB
All DBs
Position
Unknown
AA seq
976 aa
AA seq
DB search
MFAVLFVCGILLAPAQGLSEPRIRLSSGAPAGSDVILRSGSLLHLICEGDGPVTWHPRLA
KFKRYISKDVGNIRSFRVDKATPDVTGTYKCNYTNGNYSNVSSSVHVFVRDLRVLFVSPG
FTQPLVRKEGEDLLLPCLLTDPAATDFTLRMENGSAIPYGMNVTFDPRKGVLIRNVQPGF
TADYICSAKIGGVEKVSKIFQINIRQRLHFPPYVFLRRNEYVKLVGESLQIICTTNNPDF
YYNVTWTHSTKKLPRAEEKSKMQGDRLAIESILKIPAVQLSDSGNITCTGQNEAGANSST
TQLLVVDEPYIRLSPKLSSKLTHRGLSIEVSEGDDVDLSVLIEAYPPLTSHQWETPTSHN
ASLPENRFYNYNDRYEALLFLRRLNFQEIGSYTLHVNSSMKSASITFDIKMYKKPVATVR
WENVTTLTCRSYGYPAPSILWYQCAGSRTTCPENTTELQPIQTQTVEVQKEPYGSVGVES
VLTVGPNRRMTVVCVAFNLAGQGSDVFSMDGSDQLFTSAMYGCGVSMLVLALLLALMVYK
YRQKPRFEIRWKIIEATNGNNYTFIDPTQLPYNEKWEFPRDKLKLGKTLGAGAFGKVVEA
TAYGLGKDDNVTRVAVKMLKASAHRDEREALMSELKILSHLGQHKYIVNLLGACTYGGPV
LVITEYCCHGDLLNFLRSKAENFLNFVMTIPNFPEPTMDYKNVNTERMFIRSDSGISSTC
SDNYLDMKPVTSRPTNSVLGSSFEIQAEDSWPVDMDDLLRFSYQVAQGLDFLTAKNCIHR
DVAARNVLLTNSRVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFECVYTVQSD
VWSYGILLWEIFSLGKSPYPNVLVDSKFYKMIKCGYQMSRPDFAPPEMYTIMKMCWNLEA
CERPTFSKISQLIERMLGDTPEAQEAEYQNVQSEEHSDQEAESCDPVKHEEESTETTCDP
EEEDQPLMNANNYQFC
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcggtcctgttcgtctgtgggatcctgttggctccggctcagggtttgtctgaa
ccgcggatcagactgagctctggcgctccggccggttcggatgtgattctcaggtccggt
tcgcttcttcatttgatctgtgagggcgacggcccggtgacgtggcatccccgactggcc
aaattcaagcgttacatctccaaagatgtcggaaacatccggagtttccgtgtggataaa
gccacgccggatgttacaggaacatacaagtgcaattatacgaacggaaattactcaaac
gtgtcgtcttctgttcatgtgtttgtcagggatcttcgagttctcttcgtgtcaccgggt
ttcactcagccacttgtgcggaaagaaggtgaagatctgttgctcccgtgtcttctgacc
gaccccgccgccacggactttacgttgcgcatggagaacggctcagcgataccttacggc
atgaacgtgacctttgaccccaggaaaggtgtcctgattcgcaacgttcagcctggattc
accgccgactacatttgcagcgctaaaattggaggagttgagaaagtgtcaaagatattc
caaataaacatcaggcaaaggttacattttccaccgtacgtgttcctgaggagaaacgag
tatgtgaaactggtgggagagagcttgcagatcatttgcaccacaaataacccagacttt
tactacaacgtcacatggacacactccactaaaaagctgcctcgagcagaagagaaatca
aagatgcagggggatcgtttggccatcgagagcatccttaagataccggctgttcagctg
tctgattccggcaacatcacgtgtacgggccagaacgaggccggcgccaacagctccacc
acacaactgctggtcgtggacgagccgtacattcgtctctccccgaagctctcttctaaa
ctcactcaccgcggcctgtccatcgaggtcagcgaaggggacgatgtggatctttctgtt
ttgatcgaagcgtatcctcctctgacctcacaccagtgggagactccaacatcccacaat
gcctcacttccagagaacaggttttacaactacaacgacaggtacgaggcgctgctgttc
ctcaggagactgaacttccaggagatcggcagctacacactccatgtgaacagcagcatg
aaaagtgcctccattacttttgatatcaaaatgtacaagaaacctgtcgcgacggtgaga
tgggagaatgtcacaactctgacatgcagatcttatggatatccagctcccagcatcctc
tggtaccagtgcgcaggaagcagaaccacttgtccagagaacaccacagagcttcagccg
atccagactcagacggtggaggtccagaaggagccgtacgggtcggtgggagtggagagt
gtgctgaccgtgggcccgaaccgcaggatgacagtggtgtgtgtggcctttaatctggcc
ggtcagggcagtgacgtcttctccatggacggctctgatcagctgttcaccagtgcgatg
tacggatgtggggtgtccatgctggtcctggcgctgctgctcgccctcatggtctacaag
tacagacagaaacccagatttgagatccgctggaaaatcattgaagccacaaatggaaac
aactacaccttcatagacccgacacaacttccatacaacgagaaatgggagtttcctcga
gacaaattaaaactagggaagactctgggcgcaggagcgtttgggaaggtggtggaggcc
acggcatacggcctggggaaggatgacaacgtcacgcgtgttgctgtgaaaatgctgaaa
gccagcgctcatcgagacgagcgggaggctctgatgtcagagctgaagatcctcagtcat
ctgggacagcacaagtacatcgtgaacctgctgggcgcctgcacatacgggggtcctgtg
ctggtgatcacggagtactgctgtcatggggatcttctgaacttcctgcgtagcaaagcc
gagaacttcctgaacttcgtcatgacgattcccaactttcctgagccaacgatggattat
aagaatgtgaacactgaacgaatgttcatcagaagtgacagtgggatttccagcacatgc
tctgataactatctggacatgaaaccggtcacatccagacccacaaactcagttctgggt
tcttcttttgagattcaggctgaagattcgtggccagtcgacatggacgacttactcaga
ttctcctatcaggtggcgcagggactcgacttcctcacggctaagaattgcattcacaga
gatgtggcggccagaaacgttctcctcaccaacagccgagtggccaagatctgtgatttc
ggactggcacgagacatcatgaacgactccaactacgtggtcaaaggaaacgcccgtctt
ccagtgaagtggatggctccagagagtattttcgagtgtgtttatacggttcagagtgac
gtctggtcttacggtatcctgctgtgggagattttttcactggggaagagcccatatccc
aacgtcctggtagactccaagttctataaaatgatcaagtgtggctatcagatgtctaga
cctgactttgcacctccagagatgtacaccatcatgaagatgtgctggaacctggaggct
tgcgagaggccgacattcagtaagatcagtcagctgatcgagaggatgctgggagacaca
cctgaggcgcaggaggccgagtaccaaaacgtgcagtctgaagagcacagtgaccaagaa
gcagagtcatgtgaccctgtgaagcacgaagaggagtcaactgagacgacatgtgacccg
gaagaagaagatcagccacttatgaatgccaacaactaccagttctgctga
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