Pimephales promelas (fathead minnow): 120473243
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Entry
120473243 CDS
T08155
Name
(RefSeq) 5'-3' exonuclease PLD4 isoform X1
KO
K16860
phospholipase D3/4 [EC:
3.1.4.4
]
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm00564
Glycerophospholipid metabolism
pprm00565
Ether lipid metabolism
pprm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
120473243
00565 Ether lipid metabolism
120473243
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprm04131
]
120473243
Enzymes [BR:
pprm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
120473243
Membrane trafficking [BR:
pprm04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
120473243
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PLDc_3
PLDc_2
PLDc
DUF7436
SACK1
Motif
Other DBs
NCBI-GeneID:
120473243
NCBI-ProteinID:
XP_039518906
LinkDB
All DBs
Position
Unknown
AA seq
508 aa
AA seq
DB search
MTEYFPLCFTQEYNQHLLDMSESSRLRGVQKRTSYQSLHDNYVSNTKDSKCPVSVLLATG
CLIVLGVLLAIVVIEKLKSEDDTPACCNYTVPNEHSRMVLVESFPVSMDYGRNASAGGSL
FEAWKDLLSSATEQIDVASFYWSLTAEDINVNSSADRAGREILEEFRALPSRNVSVRVVT
SIPTVALNSTDLRVLRESGVQVRRVNFGRLTKGVLHTKFWIVDGKHVYIGSANMDWRSLT
QVKELGVVIYNCSGLAADLQKIFQSYWVMGRSNTSLPDPWPSSYQTSINQEHPLPLNLSG
VASRVYITASPPAFCPASRTRDLDAILSAIRDAQVFIHVAVMEFYPASKYFHQHGYWPVI
EDALKRSAFERNVSVSLLVSCGRDTDPSVWPFLRSLDALRSPSHNINIAVRLFIIPVGNQ
SHIPYSRVNHNKYMVTDRVAYVGTSNWSADYFNTTAGVGLVVSQDALQGDSFHQQLNGVF
ARDWDSQFAVPLAELTPNHDCVFSTHTP
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgactgagtatttccctttgtgcttcacacaagaatacaatcaacacctgcttgacatg
tctgaatcttcacgcttacgaggtgttcaaaaacggacctcttatcagagcttacatgac
aattatgtgtcaaacaccaaggactcaaagtgccctgtttctgtcctgttggccactgga
tgtttaatcgtcttaggggttttattggccatcgtggtaatagagaaactaaagagtgaa
gatgacacaccggcatgctgtaactacaccgtccccaatgagcacagcaggatggttctg
gttgagagtttccctgtcagcatggattacgggagaaacgccagcgctggaggaagcctg
tttgaagcctggaaggatcttctgtcttcggccaccgaacaaatcgacgtggcgtcgttc
tactggtctctgacggctgaagacatcaacgtgaactccagcgcggacagagctggcaga
gagatattagaggagttcagagcgttaccgtcgagaaacgtgtctgtgcgagtggtgacc
agcatcccgactgtggctctcaattcaacagacctgcgagtcctgagagaaagcggagta
caggtacgacgagtgaacttcggccgcttgactaaaggagtccttcatactaaattctgg
attgtggacgggaaacacgtttacatcggcagcgccaacatggactggaggtctttaacg
caggtgaaagagctgggtgtggtgatctacaactgcagtggtttggccgccgacctgcag
aagatcttccagtcgtactgggtcatgggtcgctccaacacttctctcccggacccgtgg
ccgtcctcctaccaaacctccatcaaccaggagcatccgctgcctctcaacctcagcggt
gtggccagtcgagtttacatcacggcctctccgccggcgttctgtccggcctctcgaacc
cgagacctcgatgccattctgtcggccatcagagacgcgcaggtcttcatacacgtggcc
gtcatggagttttatcccgcctccaagtacttccatcaacatggatactggccggtcatt
gaagacgccctgaagcgctcggccttcgagaggaacgtgtccgtgagtctgctggtcagc
tgcggtcgagacactgacccgtccgtgtggccgttcctccgctcgttagacgctctccgc
tccccgtcccacaacatcaacatcgcagtgaggctgtttatcattcccgtggggaaccag
tcgcacatcccctactccagagtcaaccacaacaagtacatggtgaccgacagagtggcg
tatgtaggcacgtctaactggtcagctgactacttcaacaccactgctggagtgggcttg
gtggtttcccaggatgctttgcagggagactcgttccatcagcagttgaacggcgtgttt
gcccgagactgggactcgcagtttgccgtcccgctcgctgagctcacgccgaaccacgac
tgtgtgttctccacacacacaccatag
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