Pimephales promelas (fathead minnow): 120473313
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Entry
120473313 CDS
T08155
Symbol
gabra4
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-4
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04080
Neuroactive ligand-receptor interaction
pprm04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120473313 (gabra4)
04082 Neuroactive ligand signaling
120473313 (gabra4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pprm04040
]
120473313 (gabra4)
Ion channels [BR:
pprm04040
]
Ligand-gated channels
GABA-A
120473313 (gabra4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
CytochromB561_N
Zip
PFF1_TM
SOG2
Motif
Other DBs
NCBI-GeneID:
120473313
NCBI-ProteinID:
XP_039519034
LinkDB
All DBs
Position
Unknown
AA seq
552 aa
AA seq
DB search
MVSAKKEMVTAMYPTSIPTLLYFLCVAACIKRISGQIRKDEKLYPENFTRILDRLLDGYD
NRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWVDRRLRYDGPVEILRLN
NLMVTKVWTPDTFFRNGKRSVAHNMTAPNRLFRIMKNGTILYTMRLTISAECPMKLVNFP
MDGHSCPLKFGSYAYPMTEVIYTWTKGPQHSVEVPPESSSLVQYDLIGQTVSSETVKSIT
GEYVVMTVYFHLKRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTMT
TLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNAQAERAKRKQAAAAA
SAKSSTASGKAKDTEEVLQQTSDTNGNLRKRVNSSIQSQPDSKKTQRTETSSKSAAATSK
PTLTSQSSSTSEGTSSFSSQSRLSPSSASQSKTAPSSKTTPPAPPSTPTVPEKPSPGATA
GSAPLHHLLGPKLENIKKKEAKAAPQPAAPATGGASKIDEYARILFPVSFGAFNMVYWVV
YLSKETMEAKGG
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggtttctgccaagaaggagatggtgactgcgatgtaccccacttctattcccactctc
ctctactttctctgtgtggcagcttgcataaagagaatatctggacagatcagaaaggat
gagaaattatacccggaaaatttcacgcgcattctggaccgactcctggatggatacgac
aacagactccgacctggatttgggggtccagtgacggaagtgaagaccgatatttacgtc
acaagttttggcccagtttccgacgtggagatggagtacaccatggatgtgtttttccgc
cagacgtgggtggataggcggttgagatatgatggaccggtggagatcctccgtctaaat
aacctgatggtgaccaaagtctggacccctgacacgttcttcaggaatggcaaacgatcc
gtggctcacaacatgactgcgcccaataggctcttccgaatcatgaaaaacggcaccatc
ctgtacactatgagattgacaataagtgcagaatgcccgatgaaactcgtcaatttcccg
atggatggccattcctgtcctctgaagttcggcagctatgcctatccaatgactgaggtg
atctacacctggaccaaaggccctcagcattctgtggaggtcccacctgagtcgtccagc
ctggtccagtacgacctgattggacagactgtgtcaagcgagactgtaaagtccatcaca
ggtgaatatgtggtaatgacggtctacttccacttgaaacggaaaatgggctacttcatg
attcagacgtacatcccctgcatcatgactgtaatcctttcccaagtgtctttctggata
aataaggaatccgtacccgccagaactgtctttggaatcaccaccgtgctcacgatgacg
accctcagcatcagcgcgcgtcactccctgcccaaggtctcgtacgccacggccatggat
tggttcatcgcggtgtgtttcgccttcgtcttctctgctctcatcgagttcgccgccgtg
aactacttcaccaacgcgcaggctgagagagccaagagaaaacaggccgccgctgccgcc
agtgccaagagctccacagcgtcaggcaaagccaaagacacagaggaggtcctacagcaa
acctcggataccaacggcaacctgcgaaaacgcgtcaactccagcattcagtctcaaccg
gactccaagaaaacccaaagaaccgaaacgtctagcaagagcgccgcagccacatccaaa
ccaactctgaccagccaatcatcttccacctcagagggtaccagcagtttctccagccaa
tcacgtctaagccccagttctgccagccaatcaaaaacagccccttcctccaagaccaca
ccgccagccccgccctctacgccaacagttcccgagaaaccgtcgcccggagcgaccgct
ggctccgcccctcttcaccatctcctcggcccgaaattagaaaatattaaaaagaaggaa
gccaaggccgcaccccaacctgccgctcccgcgaccggaggagccagcaagatcgacgaa
tatgcgcgtattttattcccagtgtcctttggggcattcaatatggtgtactgggtggtt
tacttatccaaagaaaccatggaggccaagggaggctaa
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