Pimephales promelas (fathead minnow): 120473324
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Entry
120473324 CDS
T08155
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-2
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04080
Neuroactive ligand-receptor interaction
pprm04082
Neuroactive ligand signaling
pprm04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120473324
04082 Neuroactive ligand signaling
120473324
04519 Cadherin signaling
120473324
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pprm04040
]
120473324
Ion channels [BR:
pprm04040
]
Ligand-gated channels
GABA-A
120473324
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
120473324
NCBI-ProteinID:
XP_039519044
LinkDB
All DBs
Position
Unknown
AA seq
451 aa
AA seq
DB search
MRERFALHLLIFVLTLFWHTRSVSADATTDAFKNNITLFTRILDRLLDGYDNRLRPGLGD
RVTTVKTDIYVTSFGPVSDTDMEYTIDVFFRQSWKDERLKFEGPMNILRLNNLMASKIWT
PDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTMRLTVHAECPMHLEDFPMDFHSCPLK
FGSYAYTTTEVTYTWTKNASNSVVVEEESSRLNQYDLLGQTVGNETIRSSTGEYTVMTAH
FHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNS
LPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGWAWDGKSVVNDKKKEKASVIKK
NNAYAVAVANYAPNITKDTVLPTIAKGNVAEPGKTKADGKPAEAKKTFNSVSKIDRISRI
MFPVLFGTFNLVYWATYLNREPVIKDMVPSY
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgagggagaggttcgcgcttcatcttctcatcttcgtgttgacgctgttttggcacacc
aggtcagtgtctgcagatgccacaacagatgccttcaaaaacaacatcacactcttcaca
cgcatcctggaccgcctgctggacggctacgacaaccgtctgagacccgggctcggagat
cgagtcaccacagtgaagaccgacatctacgtcaccagttttggccctgtttcagacacc
gatatggagtacaccatcgacgtgttcttcaggcagagctggaaggatgaacgactgaag
ttcgagggaccgatgaacatcctgcgtttgaacaacctgatggccagtaagatctggact
ccagacacattctttcacaacgggaagaaatctgtggcacacaacatgaccatgcccaac
aaactgctgcgtatccaagatgacggcaccctgctgtacaccatgaggttgacggtgcat
gccgagtgtccgatgcatcttgaagatttccccatggacttccactcctgtccgcttaaa
ttcggcagctatgcttacacgacgacagaggtgacgtacacttggacgaagaacgcatcc
aactctgtggtggtggaagaggagagctctagactgaaccagtatgacctactgggacaa
actgtgggaaacgaaaccatcagatccagcactggtgaatacactgtgatgacggcccac
ttccacctgaagaggaagatcggttattttgtgattcagacgtacctgccgtgcatcatg
accgtcatcctatcccaggtgtccttctggctcaaccgagagtctgttccggcccgaact
gtatttggtgtgaccactgtactgactatgaccactttgagtatcagcgctcgtaactcg
ctgccgaaagtcgcctacgccacagccatggattggttcatcgcagtgtgttacgccttt
gtcttctccgccctgattgagtttgctaccgtcaactacttcaccaagcgcggctgggct
tgggatggcaagagcgtggtcaatgacaagaaaaaggagaaggcttcagtcatcaagaag
aacaacgcctacgccgtcgctgtggcaaactacgcccccaacatcaccaaggacacggtc
ctccccaccatcgccaaggggaacgtagccgaaccgggaaagaccaaagccgacggaaaa
ccggccgaggcgaagaaaaccttcaacagcgtgagtaaaatcgaccgcatatcccgtatc
atgttcccggttctcttcgggacattcaacctggtttattgggcgacgtatttgaacaga
gaacccgtgatcaaagacatggtgccctcttattag
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