Pimephales promelas (fathead minnow): 120473335
Help
Entry
120473335 CDS
T08155
Symbol
irf7
Name
(RefSeq) interferon regulatory factor 7 isoform X1
KO
K09447
interferon regulatory factor 7
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04620
Toll-like receptor signaling pathway
pprm04621
NOD-like receptor signaling pathway
pprm04622
RIG-I-like receptor signaling pathway
pprm04623
Cytosolic DNA-sensing pathway
pprm05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
120473335 (irf7)
04621 NOD-like receptor signaling pathway
120473335 (irf7)
04622 RIG-I-like receptor signaling pathway
120473335 (irf7)
04623 Cytosolic DNA-sensing pathway
120473335 (irf7)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120473335 (irf7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120473335 (irf7)
Transcription factors [BR:
pprm03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
120473335 (irf7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
120473335
NCBI-ProteinID:
XP_039519056
LinkDB
All DBs
Position
Unknown
AA seq
423 aa
AA seq
DB search
MQSSTMGKPQFGPWLIQQVESGKYEGLRMIGNDTFRIPWKHNSRKDLGDEDVKIFKEWAV
VSGKINENPYDKAKWKTNFRCALHSLKNFAMLEDHSKDAEDQHKVYRIIRPQNCQEIPRP
EPVQLQLPFIADIYSASDYMSEEMEQELLSQVEEMHLNQHAEPQPWDTCSQQHILTPSRS
NFETNYSDHPCMQNNTPAPVLQSDTNVHQCNPPNLWDLEITINYRRIEVLKTRLSSPLVQ
FHYQCDPSELSGTPIRFPTTEGLVDHMQIHFTKRILDSIQRGLQLEVNQSGIYGFRQDKC
KVFVSTSDPSEIHNPEPRKLHQNTRELLLSFDKFVKDLMDFRENRRGSPDYTIYLCFGEK
LPDGKPLEKKLITVKVVPLICRELHERAQMDGASSLRNDNVSLQISHNSLYDLINSLGLP
SMD
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgcagagcagcacgatgggcaaacctcagttcggcccgtggcttatacagcaggtggaa
agtgggaagtatgagggattgcgcatgataggcaacgatacatttcgaatcccttggaaa
cacaactctagaaaagaccttggggacgaggatgttaaaatatttaaggagtgggctgtg
gtcagcgggaagatcaacgagaacccttacgacaaagcgaagtggaagacaaatttccgt
tgtgcgcttcatagtctaaaaaactttgcgatgttagaggatcactccaaagatgcggag
gaccaacacaaagtctatcgcattatccgtcctcaaaattgccaggagatacctaggccc
gagccggttcaacttcagctaccattcattgctgacatctacagtgcatctgattacatg
tctgaagagatggagcaggaattgctcagccaagtggaggaaatgcatcttaatcaacat
gcagaaccccaaccatgggacacctgttcccaacaacacatactgactccctcgaggagc
aactttgagacgaactactcagatcatccatgcatgcagaacaacacccctgccccggtc
ctgcaatccgacactaatgtccaccaatgcaaccctcctaatctctgggacctggagatc
acgatcaactacaggagaatagaagttttgaaaactcgcctgtcttcgccactcgttcag
tttcactaccagtgtgacccatctgagctgagcggaacgccgatacgcttcccgaccacc
gagggcctggtcgaccacatgcagattcacttcactaaacgcatcctcgacagcattcag
agaggcctgcagctggaggtcaaccagtccggcatctacggcttccggcaggacaagtgc
aaagtctttgtcagcaccagtgacccctccgagatccacaacccagagccccgaaaactg
catcagaacaccagggagcttctgctcagttttgataagttcgtaaaagacctgatggat
tttagagagaacagacgggggtctccggattataccatctacctgtgctttggggagaag
ctcccggacggaaaaccactggagaaaaaactcatcacagtcaaagttgtgcctctgata
tgccgtgaacttcacgaaagagctcagatggatggagcgtcctctcttcgaaacgataac
gtcagcttgcagatctcccacaacagcctttatgaccttatcaattctttgggtctgcct
tcaatggactaa
DBGET
integrated database retrieval system
