Pimephales promelas (fathead minnow): 120473373
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Entry
120473373 CDS
T08155
Symbol
si:dkeyp-19e1.3
Name
(RefSeq) USP6 N-terminal-like protein
KO
K20133
USP6 N-terminal-like protein
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprm04131
]
120473373 (si:dkeyp-19e1.3)
Membrane trafficking [BR:
pprm04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
120473373 (si:dkeyp-19e1.3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
120473373
NCBI-ProteinID:
XP_039519110
LinkDB
All DBs
Position
Unknown
AA seq
741 aa
AA seq
DB search
MKKDIDTLIAEERAEIINKYEKGRQEGVHIKPWEDADYSVYRVTDRFGFLHEEELPTPTA
VEEKYKLQEVEREEKWVKMVKKWEKYQNSEKMMKRVYKGIPLKLRGQAWALLLDVQNVKQ
ANFRKYEKMKEQAKKYSTEIKQIDLDVNRTFRNHIMFMERFGVKQQALFHVLAAYSVYNT
EVSYCQGMSQIAAILLMYMNEEDAFWALSQLLTNQKHAMHGFFIPGFPKLHRFQLHHDQI
LSKLLPKLRKHLDKEQMCTGIYTTKWFLQCFIDRTPFTLTLRLWDIYILEGEKILTAMAY
TLLKLYKKTLLKMSLEDLREFLQDRIASSFSMSDDVVIEHLQSSMSELRRMKLDLPPPAK
GEEFPKIPLGEERPIVLLPVFQTESVPLPPAAHNNQTSNKLQAEDTTTHNQGSDKHIPSM
TSSSPVSKDTHSPSNSSLSQATPEDSGSTLKNQDHAPLQRNQLLQPEPTPFSTETLAFKD
ECVGRPLSAVSEDWPPPYQTPLTDCSSNHSLDLPELPPPPLPCIEQGVELSPSEEDVQFY
LLPPPITQPLDLILEDPSSSPSSYRSYRQLSKFPVNLYVPPSSGDRRPSNTSHYDNLSEE
EDQSVERLLEIAATLPQNPNLGLRNTTLSFPSEDAMSLPLPSPCMFFYSPDSSPLPPPPP
CIEESNRWVTPDSIFPHPPTGFADRPFLISSAPCNQVVVNQTEQDRGQSQPPRLPPKKSQ
ATRLSPVHSDSDFYRMHVPSH
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaggacattgatacgctaatagctgaagaacgggctgaaatcatcaacaaatat
gagaagggccggcaggagggtgtgcacattaagccctgggaggatgccgactacagcgtc
tacagggtcacagaccgcttcggtttcctgcatgaagaggaactgccaacacccaccgca
gtggaggagaagtataaactccaggaggtcgaaagagaggaaaaatgggttaagatggtg
aaaaagtgggaaaagtaccaaaacagtgaaaagatgatgaagcgggtgtacaaggggatt
cccttgaagctgcgcggtcaggcctgggctctgctgttggatgtgcaaaatgtgaagcag
gcaaacttcaggaagtacgagaaaatgaaggaacaagccaagaaatattcaacagaaatt
aagcagattgaccttgatgtcaacaggaccttcagaaaccatatcatgttcatggagcgc
tttggggtcaaacagcaagccctgttccatgtgctggcagcttattcggtctacaacacg
gaggtgagctactgtcaagggatgagccagatcgctgccattctgctcatgtacatgaat
gaggaagatgccttctgggccttatcacaactactgaccaatcagaaacatgccatgcat
ggattcttcatcccaggatttcccaaactccatcgttttcagcttcatcatgaccaaata
ctgtccaaactccttcccaaactcaggaaacacttggataaggaacagatgtgcactggt
atctacacaaccaaatggttccttcaatgttttattgacaggacgcccttcacactcacc
ctgcgtctttgggacatctacatattagagggagaaaagattctaaccgccatggcctat
actctcctcaaattgtacaaaaagactcttctgaagatgtctctggaggatctgagggag
ttcttgcaggaccgcattgcttcatctttcagcatgagcgatgatgttgttattgagcac
ctacaatcatcaatgtcagaactccgcaggatgaagcttgacctccctcctccagccaag
ggagaagagttcccaaagataccattgggtgaggagcgtccaatagtgctgcttccagtg
ttccagactgagtctgtacccttaccaccggccgcacacaacaatcagacctcaaacaag
cttcaggcggaagacaccaccacccacaaccagggcagcgataaacacatcccttccatg
acatcatcttcccctgtttcaaaggatacccactcaccttccaactcatcactgtcacaa
gctacacctgaagattcagggtccacactgaagaatcaagaccatgcacccttacagaga
aatcagctactccaaccagaacctacaccattttcaacagagactcttgcgtttaaggat
gaatgtgtcggtaggcctttatcggcggtgtctgaagactggcctcctccgtaccagaca
cccctgacagattgttccagtaaccactctttagatctccctgaattacctcctccacct
cttccctgcatcgaacaaggggtcgagctttcaccttccgaagaggatgtccagttttac
ctgctcccacctccaatcacccaacctttggatctcatcttagaggatccatcttcatca
ccttcctcgtatagatcctatcggcagctaagcaagtttcccgtcaacctgtacgtcccg
ccgtcctcaggtgaccggaggccttccaacacctcacattacgacaacctctcggaagag
gaggatcagtctgtggagaggctgttggagatcgcggccacattgccgcaaaacccaaac
ttgggcctcaggaacaccaccctttcctttccttcagaagatgccatgtctcttcctcta
ccatccccttgtatgttcttctacagccctgactcttcgccactccctcctcctcctcca
tgcattgaggagtcaaaccgttgggtgactccagactccattttcccccacccacctacc
ggctttgcagatagaccctttctcatatcttctgccccatgcaatcaggtggttgtaaac
cagactgaacaagataggggtcagtcacagcccccgagactaccacccaaaaaatctcaa
gccacaagactctctccagtacactcggattcagacttctaccgaatgcatgtcccaagt
cactag
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