Pimephales promelas (fathead minnow): 120473393
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Entry
120473393 CDS
T08155
Symbol
ift52
Name
(RefSeq) intraflagellar transport protein 52 homolog
KO
K19681
intraflagellar transport protein 52
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pprm03037
]
120473393 (ift52)
Cilium and associated proteins [BR:
pprm03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
120473393 (ift52)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IFT52_GIFT
IFT52_central
Itf52_C
ABC_transp_aux
OST48_N
DUF4350
DUF4159
Motif
Other DBs
NCBI-GeneID:
120473393
NCBI-ProteinID:
XP_039519165
LinkDB
All DBs
Position
Unknown
AA seq
435 aa
AA seq
DB search
MDKEQRNIVVFNASKRELFTSNSGYKSLQKKLRAQWKIQSIKEELSLEKLQGVKLWITAG
PREKFTAAELEVLKQYLDSGGGLLVMLGEGGEMKYDTNINFLLEEFGIMINNDAVIRNVY
YKYFHPKEALVSNGVLNREISRAAGKVVTGVIDEESSGNNSQALTFVYPYGATLNVMKPA
VAVLSTGSVCFPLNRPVLAFHQPKNAGKLAVLGSCHMFSDQYLDKEENSKIMDVVFQWLT
TDSIPLNQIDAEDPEITDYTMLPDTGSLSDRLRVCLQEGDENPRDFTSLFDMSLLKLHTN
TLPSVLDAYKLLNVKHEALQLITPQFETPLPLLQPAVFQPAFRDLRPPMLDLFDLDETFS
SEKVRLAQLSNKCTDDDLEFYVRKCGDILGVTGKLDKDKRDAKHILEHVFFQVVEFKKLN
VEHDIDTTEARFNMY
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggacaaagagcaacgaaatattgttgttttcaacgcatccaaacgagagctcttcacc
tccaactctggatataagtccttgcagaagaaattaagagcacaatggaagattcaaagc
atcaaagaggagctcagcttggagaaactccaaggagtgaagttatggatcactgccggc
cctcgagagaagttcaccgctgctgagctggaggttctcaagcagtatctggacagtggg
ggaggtcttctggtgatgctcggagaaggaggagaaatgaaatatgacactaatatcaac
ttcctcctggaagagtttggcattatgataaacaatgatgcagtaataaggaacgtctat
tataaatatttccatcccaaagaagcccttgtgtctaatggtgttctgaacagggagatc
agtcgtgccgctggtaaagtggtaacaggggtgattgatgaagaaagttcggggaataat
tcacaggcacttaccttcgtttacccttatggggccacattaaatgtgatgaagcctgcg
gtggccgtcctgtccactggctctgtgtgttttccactcaacaggcctgttcttgccttc
catcagcctaagaacgctggcaagttggcagttctgggctcatgtcacatgttcagtgac
cagtacctggacaaggaggagaacagtaaaatcatggatgttgttttccagtggcttaca
accgatagcattcctctcaaccagatcgatgcagaggacccagagatcacagactacacc
atgcttccggacacagggagtctgtctgaccgtctgagagtgtgtctgcaggagggagac
gagaacccgcgagatttcacatccctgtttgacatgtctctgctaaagctgcacacaaac
actcttccctctgtcctggatgcttacaagctgctgaatgtaaaacatgaagctctccag
ctgatcacacctcagtttgaaactcctcttcctcttctgcaaccggccgtctttcagcca
gcgtttagggaccttcgcccacccatgcttgacctttttgacctcgacgagaccttttct
tctgagaaagttaggctggctcagctctcaaacaaatgtaccgatgatgatcttgagttt
tatgtacgtaaatgtggagacatcttaggagtgacagggaagttggacaaggacaaaaga
gatgccaagcacatactggagcacgtcttcttccaggtggtggagttcaagaagctcaat
gtagagcatgatatcgacaccacagaagcaagattcaacatgtattga
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