Pimephales promelas (fathead minnow): 120473413
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Entry
120473413 CDS
T08155
Name
(RefSeq) E3 ubiquitin-protein ligase DTX3L-like isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
120473413
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pprm04121
]
120473413
Enzymes [BR:
pprm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120473413
Ubiquitin system [BR:
pprm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120473413
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DTC
zf-RING_UBOX
zf-C3HC4
KH_DTX3L
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
RING_XB3-XBAT31
zf-C3HC4_4
Baculo_IE-1
zf-RING_11
zf-RING_5
zf-RING_4
zf-RING_10
zf-rbx1
TRAF3_RING
Siva
Motif
Other DBs
NCBI-GeneID:
120473413
NCBI-ProteinID:
XP_039519202
LinkDB
All DBs
Position
Unknown
AA seq
757 aa
AA seq
DB search
MEQAVEPMDIDDIYTAGDERPQPSAPLDVAKFIMKVDWRKPFPERWKAKLQKALQSCFLK
TEGKPDVVSLKLMEDQSCAEVQITPSTAVQWTAIDSIVEEAKEEGIIIRRGTLMDKKALE
VLKRLKHISLRFKDYKDGTFKEVTAWIGLDEAHFVKDNGAPSTKVIGSMPVTAASEYTND
VENVSTSNRASNKAKSSKTAITTPDTPALQAVPLYQFWYMHHAYRKEMEQIEKHHGVSIC
AEVSVSIKPTKSPSPDSVSKATDDFYKLVQGCVDNFSQAAINHNQMDSDLVKQAFRHIQS
EKAKMMFTMSASDCLFFGPKKLTDVIKREFEGTRESQFNDKSSQMNKDFFSPQSRRNMDT
KDLPTHLEMDTVHGDLMKLSYKEKLSQLETKYGVSFNEEKQQKNSTIKVQARSKGVQHIN
LESHAIRALTQLYQKLASAAVTCELQNPRDATLVASAVEKLQQELHCVVAEDASSGWRLV
GLPEHLGPAIAEIEKRLQKSVFDDKRKKSIGYSGDVPHTRGIQWNQTPDYGPGAVGGSVG
EEGVNFKGWSEADKGFIDKLKKNSRNDCKDAPAEEETCSICMDSFTDKKKLKCGHEFCQD
CIRLSVESMGPICPVCKEVFGILEGNQPDGTMRVTNSRTSLPGYPRCGTIEINYYIPSGI
QTKHHPNPGKHFYGANLHAYLPDNPEGREVLKLLQRAFKQKRIFTVERSTTTGADNVVIC
NGIHHKTNMSGGPEGNGYPDPDYLKKVKKELQAKGIK
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atggaacaggcagttgaaccaatggacattgacgacatttatacagctggtgatgaaagg
ccacagccttcagcaccattggatgttgctaaatttataatgaaagtggactggaggaaa
ccatttccagagagatggaaggcaaaattacagaaagcccttcagagctgcttcctcaaa
acagaaggaaaacctgatgtcgtcagccttaaactcatggaggatcagtcctgtgccgag
gtgcagataacgccatcaacagctgttcagtggactgccatagactcaatagtggaagaa
gccaaagaagaaggaataataataagaagaggaacactaatggataaaaaagctctagaa
gtgttaaaaaggctcaaacatatatctttgaggtttaaagattataaggatggtacattt
aaggaagtcactgcatggattggtctggatgaagcacattttgtaaaggacaatggagca
ccttcaacaaaggtgatcggttctatgcctgtgactgcagcatcagaatacacaaatgat
gttgagaacgtgtctacatctaatagagcttcaaataaagctaagtccagtaaaactgca
ataacgacccctgatacaccagctcttcaggctgtccccctctatcagttctggtacatg
catcacgcctacagaaaggagatggagcaaattgagaaacatcatggagtctctatttgt
gcagaagtgtcagtctcaatcaaacccaccaagagcccaagccctgattctgtgtctaaa
gccactgatgacttttacaaacttgttcagggatgtgttgataattttagtcaagctgcc
attaaccataatcaaatggattcagatcttgtgaagcaggcctttcgtcacatccagtcg
gagaaggcaaagatgatgttcaccatgtctgccagtgactgcctgttctttggaccgaag
aaacttacagacgtgattaaaagagagtttgaaggaacaagggaaagccaattcaatgac
aaatcaagccaaatgaataaagactttttttctccacaaagcaggagaaacatggacaca
aaggatctaccaactcatctagagatggacacggttcatggggatctgatgaaactttcc
tataaggagaaattatcacagcttgaaacaaagtatggagtgtcatttaatgaagaaaaa
cagcagaaaaactcaaccattaaagttcaagctcgatccaaaggagttcaacatattaat
cttgaaagtcatgccatcagagctttaacacaactctaccagaaacttgcatccgccgct
gtcacctgtgaactccaaaaccctagagacgcaactcttgtggcatcagcagtagagaaa
cttcagcaggagcttcattgtgttgttgcagaagatgcttcgagtggctggaggctcgtt
ggactgccagaacatctcggtcctgccattgctgaaatcgagaagagacttcagaagagt
gtgtttgatgacaagaggaagaaatcgattggttactcaggggacgttcctcatacaaga
ggaatccaatggaatcagacgcctgattatggaccaggagcagttggaggatcagtaggg
gaagagggagtgaattttaaagggtggagtgaagctgataagggtttcattgataagcta
aaaaaaaattctagaaatgactgtaaagatgctcctgctgaagaggagacgtgttctatt
tgcatggacagcttcacagacaagaaaaaactgaaatgtgggcatgaattctgtcaggat
tgtattcgcttgtcagtggagagtatgggacccatctgtcctgtgtgtaaggaagtcttt
gggattttggagggaaaccaaccagatggaacaatgcgtgtaacaaacagcagaacgagt
cttcctggatatccacgttgtggcactattgaaatcaactattacatacccagtgggatt
caaacgaagcatcatccaaacccaggaaagcatttttatggggcaaatcttcatgcgtac
ttgccagacaatcctgaaggaagagaagtgctcaaactgctgcagagggctttcaaacag
aaacggatctttaccgtcgagagatctacaactacgggtgcagataatgtggtcatctgt
aatggtattcatcataagaccaacatgtccggtgggcctgaagggaatggctatccagat
cctgactacctaaagaaagtaaaaaaggagttacaggccaaaggcattaaatga
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