Pimephales promelas (fathead minnow): 120473417
Help
Entry
120473417 CDS
T08155
Name
(RefSeq) ATP-dependent RNA helicase DDX19A
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03013
Nucleocytoplasmic transport
pprm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120473417
03015 mRNA surveillance pathway
120473417
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprm03019
]
120473417
Enzymes [BR:
pprm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120473417
Messenger RNA biogenesis [BR:
pprm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
120473417
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
120473417
NCBI-ProteinID:
XP_039519209
LinkDB
All DBs
Position
Unknown
AA seq
479 aa
AA seq
DB search
MATDSWAQAVDEQEAAAESISSLQINEKEDKPKAEANGAKTEGTDNKPEEDDKDDKAAQS
LLNKLIRSNLVNTTNQVEVLQRDPNSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQE
TALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSHVDPENKWPQCLCVSPTYELALQTGK
VIEQMGKFYPEVQLVYAIRGNKLERGTRLQEQVVIGTPGTVLDWCQKLKFIDPKKIKVFV
LDEADVMIATQGHQDQSIRIQRMLPKTCQMLLFSATFEETVWNFAKRIVPDPNIIKLKRE
EETLDTIKQYYVICNSKEEKFQALCNIYGAITIAQAMIFCHTRKTAGWLAGELSREGHQV
ALLSGEMQVEQRAAVIERFRDGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDN
ETYLHRIGRTGRFGKRGLAINMVDSRFSMNILNRIQEHFNKKIEKLDTDDLDEIEKIAN
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagattcgtgggcccaggctgtcgatgaacaagaagccgctgcggaatcgata
agcagcttacaaataaatgaaaaagaggacaagccgaaagctgaagcaaatggcgcaaag
acagaaggaaccgacaataaacctgaggaagatgataaagacgacaaggcagcgcagtca
ctgttgaataaactgatccgcagtaatctagtgaacaccaccaatcaagtggaagtcctc
cagagggatccgaactctccgctgtactcggtcaagtcgttcgaagagctgcgattaaaa
cctcagctgttgcaaggagtgtacgccatgggtttcaacaggccctccaaaatccaggag
accgccttacccatgatgctcgcagaacctccacagaatctcatcgctcagtctcagtca
ggcacggggaaaacggcggcctttgtgctggccatgttaagtcacgtggaccctgaaaac
aaatggcctcagtgtctgtgtgtgtctcccacgtatgagctggctctgcagaccggcaag
gtcatcgagcagatggggaagttttacccagaagtccaactagtgtatgccatcagagga
aacaaattggagcggggaacaagactacaggaacaggtcgtgattggcactccggggact
gttttggactggtgccaaaagcttaaattcatcgaccccaagaagatcaaggtgtttgtg
ctggacgaggctgatgtcatgatcgctacacagggccatcaagaccagagcattcgcatc
cagaggatgcttcctaaaacttgccagatgctcctgttctcggccacatttgaagaaact
gtgtggaactttgcgaagaggatcgttcctgaccccaacattattaaactgaagcgtgag
gaggagactctggacaccatcaagcaatattacgtcatctgcaacagcaaggaggagaag
ttccaggctttgtgcaacatctatggagccattactatcgcacaggccatgatcttctgc
cacaccaggaaaacggcgggctggctggcaggagagctgtccagagaaggccaccaggtg
gcgctgctcagcggagagatgcaggtggagcagagggcagcggtcatcgagcggttccgt
gacggcaaggagaaagtccttgttaccactaatgtctgtgctagaggtattgatgtggag
caagtttcagtggtcatcaacttcgatctgcctgtggataaggatggcaaccctgacaac
gagacgtatttgcacagaatcgggcgcacggggaggttcggcaagagagggttggcgatc
aacatggtggacagcagatttagcatgaacatcctcaaccgcatccaggagcacttcaat
aagaaaatcgagaagctggacacggatgatttggacgaaatcgagaagatcgctaactga
DBGET
integrated database retrieval system
