Pimephales promelas (fathead minnow): 120473461
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Entry
120473461 CDS
T08155
Symbol
lima1b
Name
(RefSeq) LIM domain and actin-binding protein 1
KO
K23026
LIM domain and actin-binding protein 1
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pprm04812
]
120473461 (lima1b)
Cytoskeleton proteins [BR:
pprm04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
120473461 (lima1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
Motif
Other DBs
NCBI-GeneID:
120473461
NCBI-ProteinID:
XP_039519291
LinkDB
All DBs
Position
Unknown
AA seq
738 aa
AA seq
DB search
MDAGPFSRKQWATQSLRITAKELSLVGGRGKNNAITERFSKYQKAAEEASADKKKSSVDS
LSVRSGTLSALKKRWERPALENSSLQLSVAPSVSRKPSVRPEPPASSSKPVRQPSLSQEP
TSHERPAKTKADVKTEQKKRAEEKEENESASDPFSPSSPLEKPVLPLNNRKMMFEKAKSK
EQTEVNSTSEDIDTHMANKGPSSLKRSASVRDRMAKYQLAVSRQAPVTVPRSAKQSESED
SVPVVDHKEISPPAGDGQTVKTLPPSNCAKINGEHVHTESPSTAHPASESKDPPKVLRKF
NLPVQERCVCCQKTVYPVEKLIANQQIYHITCFRCAFCNTKLSLLSYASLHGSIYCKPHF
SQLFKSKGNYDEGFGHRPHKEMWTPRANDEGPEGSENSKPSEAEPVNTKQPKVHDQPKVQ
PKPKAEESQPAKYTDVTAAQETRSHVTSSTEKPHTASVETRKLRVAWPPPADNDGSAKVS
SPVAEVGKNPTKLFRAKWPPEEEAPPAQKSSERAELKSLRRSSSLRERSRPFSVAPSLTS
TNKPQQEVPAVRRGSLEELRSLSKAKTEVKIPDKEVKIPDKKTKDTDSLFKEDIPVKMER
KEKMPSSILKVTQPTQKEAAPKQTNEESQPKPTKKEPEEIHPKQTDLQQRNEESQPKLTK
DEPELQQQRPSRARVEEEEKTSTTSPELQDTSVEEKAHRKSQDVGFWDGEEALTVEEMIK
RNRYYDDEDDDEEEVALV
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggatgcggggccatttagcaggaaacagtgggcaacacagtccttacggatcacagcc
aaagagctctcactggttgggggtcgtggcaaaaacaatgccatcactgagcgcttttcc
aaatatcagaaagccgccgaggaggcgagcgcagacaagaaaaaatcgtctgttgatagt
ttgtcggtccgatcgggaaccctgagtgcgctgaagaaacgctgggaacgaccggctctg
gagaactcttctcttcagctgagcgtggctccttctgtttcccgcaaacccagcgttcga
ccagaaccacccgcttcctcaagtaaacccgtgcgacagcccagcctgagccaggagcca
acgtcccatgagagacctgccaaaacaaaggcagacgtgaagactgaacaaaagaagcgg
gcagaagagaaggaagaaaacgagtctgcatccgatccattttctccatcttcccctttg
gagaaaccagtcttgcctctcaataaccgcaaaatgatgtttgaaaaggccaaaagcaag
gagcaaacagaagtgaacagcacctcagaggacatagacacacacatggccaacaaaggt
ccttccagtctgaagcgcagcgcctctgtcagggaccgcatggcgaaatatcagctcgcg
gtcagcagacaggctcccgttactgtgccacgctcggcaaagcagtcggaaagcgaggac
agcgttcccgtcgtggatcataaggagatctcgcctcctgctggtgatggacagacagtg
aaaacactccctccatcaaattgtgcgaagatcaatggagagcatgtacacacagagagt
cccagcactgcacaccctgcgtcagagagcaaggaccctcctaaagtgctcaggaaattt
aatctgcctgtccaggaaagatgtgtgtgctgccaaaagactgtttacccggtggaaaaa
cttattgccaaccagcagatttaccatataacttgcttccgctgtgccttctgtaacacc
aaactcagcttgctgtcttatgcttccctgcatggcagcatctactgcaaacctcacttc
agtcagctcttcaaatctaagggcaactatgatgagggcttcggccaccgaccgcacaag
gaaatgtggacaccacgagcaaacgacgagggacccgaggggagtgaaaactcaaagccc
tctgaggcagagcctgtgaacaccaaacaaccaaaagtacatgatcaaccaaaagtacaa
ccaaagcccaaagcggaggagtcacaaccagccaaatacactgacgtgactgcagctcaa
gagaccaggagtcatgtgaccagctccacggaaaaaccacacaccgcctctgtggaaacc
agaaaactgagagttgcgtggccacctcctgcggacaacgatggaagcgccaaagtgtcc
agtccagtcgctgaagtcgggaagaatccaaccaagcttttccgagcaaagtggcctccg
gaggaagaagctccaccagctcagaagagctcagagagagcagaactgaaaagcctgagg
cgaagctcgtctctcagagagcgcagccggcccttttctgtggctccaagcctgacatca
accaataaaccacagcaagaggtgcccgcagtcagacgaggctcgctggaggagcttcgc
tcgctgtcaaaggccaaaactgaagtcaaaatcccagataaagaggtgaaaatcccagat
aaaaagacaaaggacaccgacagcctattcaaagaggatattcctgtgaaaatggagagg
aaggagaagatgccctcttccattctcaaagtgacacaaccaacccaaaaagaggctgct
cccaaacaaacaaatgaggagtctcagccaaaaccaacaaaaaaagagccagaggaaatt
catcctaaacaaactgatctacaacaaagaaatgaggagtctcagccaaaactaacaaaa
gacgagcccgagctccaacagcagaggccttcgagagctcgtgtggaagaagaggagaaa
acatccacgacttctcctgagctccaggacacatccgtggaagaaaaagcccatcggaag
tcccaggacgtgggcttctgggacggggaggaggccctgaccgtggaggagatgatcaag
aggaatcgctactatgatgatgaagatgacgatgaggaggaagtggcactggtttga
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integrated database retrieval system
