Pimephales promelas (fathead minnow): 120473481
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Entry
120473481 CDS
T08155
Symbol
rargb
Name
(RefSeq) retinoic acid receptor gamma-B isoform X1
KO
K08529
retinoic acid receptor gamma
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120473481 (rargb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pprm03310
]
120473481 (rargb)
Transcription factors [BR:
pprm03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
120473481 (rargb)
Nuclear receptors [BR:
pprm03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
120473481 (rargb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
RNA_pol_3_Rpc31
Motif
Other DBs
NCBI-GeneID:
120473481
NCBI-ProteinID:
XP_039519316
LinkDB
All DBs
Position
Unknown
AA seq
492 aa
AA seq
DB search
MATNRERPVSHMTGFYPFAFSSMRNHSPFDLLANGSLFGRFGADLPKEMAALSVETQSTS
SEEMVPSSPSPPPPPRIYKPCFVCQDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYTCHRD
KNCQINKVTRNRCQYCRLQKCFEVGMSKEAVRNDRNKKKKDVKEEVVLPESYELSGELEE
LVNKVSKAHRETFPSLCQLGKYTTNSSADHRVQLDLGLWDKFSELSTKCIIKIVEFAKRL
PGFTSLTIADQITLLKSACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLT
DLVFAFAGQLLPLEMDDTETGLLSAICLICGDRMDLEEPHRVDQLQEPLLEALKIYARRR
RPNKPHMFPRMLMKVTDLRGISTKGAERAITLKMEIPGPMPPLIREMLENPEAFEEKSDS
KDDEAAAPPPPPAIQAIKRERDEESALEDEEDEEDECVEEGRDRAGDSEDEEWGILQVDM
SGARKSVSGRAQ
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccaatagggagaggcctgtgagtcacatgacagggttctacccatttgccttc
agctccatgcgaaaccactccccctttgatctcctggccaatggcagcctctttggacga
tttggggcggacctccccaaagagatggcagctctgtcggtggagacccagagcacaagc
tcagaggagatggttcccagttctccttctccacctcctcctccccgcatctataaaccc
tgctttgtgtgccaggacaaatcttctggctatcattatggagtgagctcttgtgagggc
tgcaagggttttttccgtcgcagtatccagaagaacatggtgtacacctgtcacagagac
aagaactgccagatcaataaggtgacgcgtaaccgctgtcagtactgccgactgcagaag
tgcttcgaggtcggcatgtcaaaggaagcagtgcggaacgacaggaataagaaaaagaag
gacgtaaaagaggaggtggttcttccagaaagctatgagctgagtggagaactggaagaa
ctggttaataaagtcagcaaagcgcacagggaaaccttcccttcgctctgccagctgggg
aaatacacgactaactccagtgcggatcacagggttcagctggatcttggactgtgggat
aagttcagtgaactctccacaaagtgcattataaagattgtggagtttgccaaacgtctg
ccaggttttacttcactcaccattgcagaccagatcaccttactgaagtctgcctgcctt
gatatactgatgttgcgtatctgtactcgctacactccagagcaggacacgatgaccttc
tcggatgggctgaccctcaacaggacacagatgcacaacgctggtttcgggccgctcaca
gacctggtgtttgctttcgccgggcagctcctgcctctggagatggacgacactgagacc
gggctcctgagtgcgatctgcctcatctgtggagaccgcatggatctagaagagcctcat
cgtgtggatcagctacaggaacctctgcttgaggcgttaaagatctacgctcgccgtcga
cgtcccaacaaacctcacatgttcccacggatgctgatgaaggtcactgacctccgaggc
atcagcactaaaggagcggagcgagccatcactctgaagatggagatcccaggcccgatg
cctcctctgatccgagagatgctggagaaccccgaggcctttgaggagaagtccgactct
aaagacgatgaagctgccgcccccccgccaccccccgccatccaggccatcaaacgcgaa
cgggacgaggaatctgccctggaggacgaagaagacgaggaggatgagtgtgtggaggag
ggacgggacagggcaggggacagtgaggatgaggaatgggggatcctgcaagtggacatg
agcggagctagaaagagtgtgtcgggacgagcgcagtga
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