Pimephales promelas (fathead minnow): 120473567
Help
Entry
120473567 CDS
T08155
Symbol
hnf1a
Name
(RefSeq) hepatocyte nuclear factor 1-alpha isoform X1
KO
K08036
transcription factor 1, hepatocyte nuclear factor 1-alpha
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120473567 (hnf1a)
Transcription factors [BR:
pprm03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
120473567 (hnf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
HNF-1A_C
Homeodomain
Telethonin
HTH_37
HTH_5
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
120473567
NCBI-ProteinID:
XP_039519404
LinkDB
All DBs
Position
Unknown
AA seq
558 aa
AA seq
DB search
MEGGEGRRAEGSGRLSALQEQLVWSLLGSGLSKELLIQAMGDLERERGPAGGERTDRADG
ESSEEGEMDNPPPIFHDLERLPPEEAARQRAEVDQLLQQDPWHVAKIVKSYMQQHNLPQR
EVVESTGLNQSHLSQHLNKGTPMKNQKRAALYSWYIKKQTEISQQFTNASRGVMSGEESG
EDVRKGRRNRFKWGPASQQILFQAYERQKNPSKEEREGLVEECNRAECLQRGVSPSQLAG
LGSNLVTEVRVYNWFANRRKEEAFRHKLALDVPYSSQSASSTGQTLSSSPSPGLKYSQSV
LCESLGTMRSSSGEDRGGGGRLASPVQLEPSHTLLDAHHLKPVSGCGSLPPVSTLTSLHG
LSGSSAAPPGLIMASLPSVMSLGDSSLLIGLTSSQPQTVNMGGGFTTLQPISFQQQLQSS
PQQPIAQQLQSHIGPSSFMATMAQFPCHMYSKADLSSYPSSSLLSQAMVIADSNSIGTLT
NLTAVRQILTSDPEGHTDTPIEEESLHLQSTSPEPVSSDSLELYSQTQTSETHPTHLLSS
SPGDIDPYIPTQMVSTAQ
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggagggaggagaggggaggagagcagaaggaagcggccggctgtcggccttgcaggag
cagctggtgtggtccctgctgggctcgggactgtccaaagagctgctgatccaggccatg
ggagacctggagagagaacggggcccggccggcggagagagaacggaccgggccgacgga
gagagctctgaggagggagagatggacaatcctcctcccatcttccatgatttggagaga
cttccaccggaggaggccgccaggcaacgggctgaagtcgaccagctgttgcaacaggat
ccctggcatgtggctaaaatagtgaagagttacatgcagcaacacaacctaccacagaga
gaggtggtggagtccacgggcctcaaccaatcccatctctcccagcacctcaacaagggc
acacccatgaagaaccaaaagcgtgccgccctgtacagctggtacatcaagaaacagaca
gagatcagccaacaattcaccaatgccagtcgcggtgtcatgtcaggagaggaatccggt
gaggatgtgagaaagggacggaggaatcgattcaaatggggtcctgcctcccagcaaatc
ctgttccaggcttatgaacgacagaagaaccccagtaaggaggagagggagggactggtg
gaggagtgcaacagagcggagtgtcttcagaggggagtttctccttctcaattggctggc
ctgggctctaatttggtcacagaggttcgtgtatacaattggttcgcgaatcggcgtaaa
gaggaggcctttcgccacaaactagcactggacgttccctacagcagccaatcagcttcc
tccacaggacaaacattatcatctagtccttcaccaggtctgaagtacagccagtcagtg
ctgtgtgagagtttgggcacaatgagaagctccagtggtgaagacaggggtggtggcggt
cgtctcgccagtccagttcagctagaacccagtcatacactcctggatgcacaccatctt
aaaccagtatctggttgtggctccttacctcctgttagtactctcacttccttgcatgga
ttatccggatcctccgctgcccctccaggactgatcatggcctccctaccaagtgtaatg
agtcttggagactcttcacttctcataggtttgacatcctctcaaccacagacagtcaac
atggggggagggtttactacccttcagccaatctcttttcagcagcagcttcaatcctca
cctcagcagccaatagcacagcagctccagtcacacattggcccaagctccttcatggca
acaatggcacagttcccatgccacatgtatagcaaagcagacctgagctcttacccctcc
tccagtctcctgtcccaggctatggtcatcgcagacagcaacagcattgggacactgacc
aacctcacagctgttcgacagattctcacctcagatcctgagggtcacacagacactccc
attgaagaagagtctttacatctgcaatccacttcaccagaaccagtgtcttcagatagt
ttggagctctactctcagacccagacaagtgaaacccatcctacacacctgctttcgtct
tcaccaggggacatcgacccttacatccctacacagatggtctctactgcgcaatag
DBGET
integrated database retrieval system
