Pimephales promelas (fathead minnow): 120473596
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Entry
120473596 CDS
T08155
Symbol
cdx1b
Name
(RefSeq) homeobox protein CDX-1b
KO
K09312
homeobox protein CDX1/4
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120473596 (cdx1b)
Transcription factors [BR:
pprm03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
120473596 (cdx1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Caudal_act
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
120473596
NCBI-ProteinID:
XP_039519442
LinkDB
All DBs
Position
Unknown
AA seq
253 aa
AA seq
DB search
MYVSYLLEKDTSMYPNSVRHPSLNLNPPNFVTAPPQYPDFTGYHHVPGITNEPHHSQTGG
WNPAYPPPREEWTPYGTGTGPSASGTGQLGFSPPEFSSVQASGLLPSSINSSVGQLSPNS
QRRNPYDWMRRSAPPSNSGGKTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAT
TLSLSERQVKIWFQNRRAKERKVNKKKMQQPQPASTTTPTPPGSSLPGNVSMVTSSSGGL
VSPPMPMNIKEEY
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgtatgtgagttacctcttagagaaggacaccagcatgtacccaaattccgtgagacac
ccaagcctaaacctgaaccctccgaattttgtcaccgcacctccacagtatccggacttc
actggataccatcacgtccctgggattaccaacgagcctcaccacagccaaaccggaggc
tggaaccccgcgtaccctcctccgagagaggaatggacaccttatggcacaggaaccgga
ccttcggcttcgggcacgggtcagctgggcttcagtcctccggagttttcgtctgtccaa
gcgtcaggccttcttccatcgtccataaactcgtcagtcggtcagctgtcgccgaactcg
cagagacggaacccgtacgactggatgcgtcggagcgcgcccccgtcaaactcaggagga
aagaccagaacaaaagataaataccgggtagtgtacacggaccatcagcgtctggagctg
gagaaagagtttcattacagtcgctacatcacgataagaagaaaagcagagctggcgaca
acactcagtctgtcagagagacaggtgaagatctggttccagaaccggcgtgcaaaagag
aggaaagtcaataaaaagaagatgcaacagcctcagccagcgtccacaaccacaccgacc
ccacctggatcatctctcccgggcaacgtgtccatggtcaccagtagcagcggcggactg
gtctcgccgcccatgccaatgaatatcaaagaagagtactga
DBGET
integrated database retrieval system
