Pimephales promelas (fathead minnow): 120473694
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Entry
120473694 CDS
T08155
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120473694
04121 Ubiquitin system [BR:
pprm04121
]
120473694
Transcription factors [BR:
pprm03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
120473694
Ubiquitin system [BR:
pprm04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
120473694
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
ZBED1_RNase-like
ZBED1_RNase-like_helical
FAM200-ZBED5_RNase-like
DUF8247
hAT-like_RNase-H
CfpA_N
Mcf1_PED
Dynactin_p22
DBD_Tnp_Hermes
Motif
Other DBs
NCBI-GeneID:
120473694
NCBI-ProteinID:
XP_039519610
LinkDB
All DBs
Position
Unknown
AA seq
549 aa
AA seq
DB search
MSTKSSETDKSTPQSQPSEQVSIVQAFASVTPYEKGSKRHKEITDAITNHICKDMVPAYI
VSKDGFRRLIQTLDKRYQLPSRTHFTRVAIPEMYEKCKAGVEYELKKVKFYATTTDMWSS
RTMEPYMSLTVHYIDDNYEIKSRCLQTAYFPENHTGENIAQGLKEALASWGLCEDQQVSI
TTDNGSNIVKAVTLNNWTRLQCFGHRLHLAIENAIKDERISRANGLCKKIVGHFSHSWKK
KMMLAEAQEELQLPQHALITSCPTRWGSMQQMIDRVLEQQKALSQVLSADRKTRHLVPQW
QDTDVLESVSKALGPLQEFTDALSSENYISVSYVKPVLHLLNTKILAVKDEDTDLTKTIK
SKILNYINKHYEDETTQELLDIATFLDPRFKTNYTDEDKLPNIKARVMSDMDMSSHKDTY
EPGSSTSRENPDIDLPPPGKKARKSLGSFFKTTSAMPAALQLEEAIASELNSYLLSPSID
SEEDPLKWWRLHQINFPRMSRVAQKYLCIPATSSPSERVFSTGGNVVTCHRSCLKPEMVD
MLVFLAKNL
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacaaagtccagcgaaactgacaaaagcacacctcaaagccagccatctgaacaa
gtatccatcgttcaagcatttgcaagcgtcacgccttatgagaaaggatcaaaacggcac
aaagaaatcacagacgcaatcacaaatcatatatgcaaagacatggtgcctgcgtacatc
gtcagtaaagacggcttccgaagactaattcaaacactggacaaaagataccagctgccg
tctcgcactcatttcacacgggttgcgattcccgaaatgtatgagaaatgtaaggcgggc
gttgaatacgagcttaaaaaggtgaaattctacgccacgaccacagatatgtggtccagc
agaacgatggagccgtacatgagtttaacggtccattatatcgatgacaactatgaaata
aaaagtcgatgcttgcaaacagcatattttccagaaaatcacactggagaaaatatcgct
caaggtttaaaagaagctttagcatcatggggactttgtgaagatcaacaagtgtctatc
accacagacaatggatccaatatagtgaaggctgtcactttgaacaactggacacgactg
cagtgcttcgggcacagactacatttggcaattgaaaatgcaatcaaggatgaacgcatt
tccagagccaacggcttatgcaaaaagattgtgggacatttttcccacagttggaaaaaa
aagatgatgttagccgaagcccaggaagaacttcagcttccccaacatgccctcattaca
tcatgcccgacaagatggggctcaatgcaacaaatgatagacagggttttggagcaacag
aaggcattgtctcaggtcctttcagctgaccgtaaaacaagacacctagtaccacagtgg
caagacacagatgttctagaatctgtgagtaaggcactgggtccacttcaggagttcacg
gatgccctttccagtgaaaactacatcagtgtatcctacgtgaaaccagttcttcatctg
ttgaacaccaagatacttgcagtgaaggatgaagatactgacctgacaaagactataaaa
tcaaaaattcttaactacatcaacaaacattatgaggatgaaactacccaagagcttctg
gacatagcaacatttttggatccaagattcaaaaccaactacactgatgaggacaaactt
ccaaacattaaggccagggtcatgtctgatatggatatgagttcccacaaggatacatat
gaacctgggagtagcacaagcagagagaatcctgacatcgatctacctccaccaggcaaa
aaagcaaggaagtccttgggaagcttctttaaaacgacatcagccatgccagcagctctg
caacttgaagaagccattgcctctgagctaaatagctacctgctttctccatccattgac
agtgaggaagatcctttgaaatggtggagactccatcagataaatttcccaagaatgagc
agggttgcacaaaagtatctttgtattcctgccaccagctcaccttcagagagagtgttt
agtactgggggaaatgtggtgacatgtcaccgttcatgcttaaaaccagaaatggtagac
atgctggttttccttgcaaaaaacctttaa
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