Pimephales promelas (fathead minnow): 120473747
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Entry
120473747 CDS
T08155
Symbol
rsf1a
Name
(RefSeq) remodeling and spacing factor 1
KO
K11657
remodeling and spacing factor 1
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120473747 (rsf1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pprm03036
]
120473747 (rsf1a)
Chromosome and associated proteins [BR:
pprm03036
]
Eukaryotic type
Chromatin remodeling factors
RSF complex
120473747 (rsf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WHIM1
PHD
DDT
WSD
Motif
Other DBs
NCBI-GeneID:
120473747
NCBI-ProteinID:
XP_039519669
LinkDB
All DBs
Position
Unknown
AA seq
1305 aa
AA seq
DB search
MAAPGTTAALPPALSPGFAVVCSFLERYGPVLDLPELTFPQLERYLQDTSAVPRPLIELH
VKLLRKIGKTVTPERWEKYLVKVCQEFNSTWAWEMERKSYLEMTVECKTGILKYLCECQF
DDNLKFKTLINEEDPDKMRLQPIGRDKEGLLYWFQLDQEQNIRVYSEEQDDLDGSSWKCI
AKNRNDLADTLEQLKAKIDTPVTDQETQGCPTSPNMEAEGVKGEAEAENLRNPVSGQGDF
SNTTFNSSEIGLIPKDIKKETPMDPVKPEQEEKVVEISKPKLVIDNRVSTIKTLVKEEQK
DDPKPWNAISVVMPPASIKQEPAKKSEVHDDKKEMMFGNVARTVKSDQQAKIPLKKRELK
RSGGYDVSNHYTNVNHSNNNLNSNGSISTGGIIVRNPAVLPLKEQQIKREFPTDEEKGPT
AIIPVPQKLLGKHSTVDLYHTVSQEQYVGVGVIKGPIERKKPLNENDNSSNGHHGNMNVL
KTEVGGADSVRQSVLVGKSMVKADNGPHPCSVLEDLVSKDACNKSPDVEAKVSNLVEESP
MTEEMEKTSVEEKVDKIDKEEELKNSKTLSAREKTDVEDDSKDKRLKSPRKRRSQKAKSK
LQAKEDSQNTEHLSSIGEGLVKDAEDSEKTGHNDNEEVSSELQKEGIRLKIKIPLHRRTP
ELQHKDIEELETSNRRSLRRSARICKPSPKVADCRDKKQDGKLKASSEAQDEEERIVDEE
VNVNPKELQKKVDMEGQPKSLKAKRRHRRTRWSKIRTKNSKLKGAADREEEVADDDAANN
EDTKSERKDHKSETESDQSNEIQPEDACKHCGLANHPELILLCDMCDSGYHTACLRPPLM
IIPDGEWFCPPCQHKLLCQRLEEQLLNLDTALKKKERAERRRERLVYVGISVENIIPNPD
GDEEDPMTEKKKDAKKSKSLGRRSTRMKKSISYRFDDFDEAIDEAIEEDLQDSEGGGAGH
GKPVVTVTSQQRNTVSRESRRHVKPLAPRKKRRRLNDLDSDSTVDEEESEDEFQLSDSLE
EEEFVVSGEGASDGDAGSEWGSGDSGAENQPASRRTGRTALTQRSRRSKRRPPARRRGSS
EEDLLDSEEEEEEEEMETEGSNEFSDSDVDVNRRRPRRSQNSQVNYYETSESEGSRKVSD
QKHPTLPHRRRLSSSNSEESTLSKDLEPKESLKRPERGRKCESTRKDSKPRHKVIKRTRQ
ESSSEDEEEDRGETEDSEEDEQPLRKRSNRIETDEDEEEEEENKRGNVRWRHTARNTADP
RGPGRHNGLVPLRTAAQDDDDDEDEEEFTGVTDLVNFVFDSEQLS
NT seq
3918 nt
NT seq
+upstream
nt +downstream
nt
atggctgctccgggcaccacagcagctcttcctccagcgctcagtcccgggtttgcggtg
gtctgctcttttttggagcgctacgggcctgttctggatctgcccgagctgacgttccct
cagctggagcgatacttacaagatacatcagcggttcctcggccattgattgagctccat
gtcaaactactgcggaagatcggcaaaacagtcacaccagagagatgggagaagtatctt
gtaaaggtgtgccaggaatttaacagcacctgggcatgggaaatggaaagaaaaagctac
ctagaaatgacagttgagtgtaagacaggcattttaaagtacttgtgtgagtgccagttt
gatgacaatctcaagtttaagacattaatcaacgaggaagacccagacaagatgcgtcta
caacccatcggtagagacaaggaaggtcttttgtactggttccagttagatcaagaacag
aatatacgtgtttattctgaagaacaggatgatttagatggatcctcctggaaatgcatt
gcgaagaataggaatgatcttgctgacacactagaacagcttaaagccaagattgacaca
cccgtgactgaccaagagacacaaggctgtcccaccagcccaaatatggaggcagaaggt
gttaaaggtgaggctgaagctgagaacttgagaaaccctgtatcgggacaaggggacttt
tccaataccaccttcaattccagtgaaattgggttaatacctaaagacattaaaaaagaa
acaccaatggatcctgttaaaccagagcaagaggagaaagttgttgaaatttccaagcct
aaactggtcatcgacaacagggttagtacgatcaaaactcttgtcaaagaagaacaaaaa
gatgatcccaaaccatggaatgccatttctgtcgtcatgcctcctgcttccatcaaacaa
gaaccggcaaagaaatccgaggtgcacgatgacaagaaagagatgatgtttgggaatgtg
gctagaactgtaaagagcgaccaacaggctaaaataccgctgaagaagagggagttgaaa
aggagtggaggatatgatgtcagcaatcactacaccaacgtcaatcacagcaacaacaac
cttaacagcaatggcagcatcagcacaggaggaatcatcgttcgcaatcctgccgtcttg
ccattgaaggagcagcaaatcaaaagagaattcccaactgatgaggagaaaggaccaaca
gccatcatccctgtcccacaaaagctacttgggaagcattcaactgttgatctttaccat
acggtatcacaagaacaatacgtaggtgttggagtcatcaaaggtcccattgagagaaag
aagcctttgaatgaaaacgataattcttcaaatggtcatcatgggaatatgaatgtcttg
aagactgaagttggaggcgcagatagcgtaagacagtctgtacttgttgggaaatccatg
gttaaagcagacaatggtcctcatccatgcagtgtccttgaggatctggtgtcaaaagat
gcttgcaataagagcccagatgtggaagcaaaagtatcaaaccttgttgaggagtcgcca
atgactgaagagatggaaaagacttcagttgaggaaaaggttgacaaaattgacaaggaa
gaagaactcaaaaacagcaagactttgtcagccagagaaaaaactgatgttgaggacgac
agcaaagacaaacgactgaaaagcccaagaaagagaaggtcacaaaaagccaaatccaag
ctccaagcgaaagaagacagccaaaacactgagcacttatccagcattggtgagggtttg
gtgaaggatgcggaagacagtgaaaaaactggacacaacgataatgaagaggtatcgtcg
gagcttcagaaggaggggattcgcctgaaaatcaagatcccgcttcataggcgaacgcct
gaactccagcacaaggacatcgaagagttggaaaccagcaatcggagatccctacggaga
tctgccaggatctgcaagcctagccccaaagtggcagattgtcgagataagaagcaagat
ggaaaacttaaggcctcctcagaagcacaagatgaagaggaacgcatagtggacgaagag
gtgaatgtgaatcccaaggagttgcaaaaaaaagtggacatggaaggacagcctaagtct
ttgaaggccaaacggcgacacaggcgtactcgttggtcgaaaattcgtacgaaaaatagc
aaactcaaaggtgctgcggatcgggaggaggaagtggccgacgacgacgctgcaaacaat
gaagacaccaaatcagagagaaaagaccacaagagtgagaccgaatcagaccaatccaac
gagattcaacctgaagatgcttgtaaacactgtgggctcgctaaccacccagaactaatc
cttctttgtgacatgtgtgacagcggatatcacacggcctgtctgagacctcctctaatg
atcattcctgatggagaatggttttgccctccttgccagcataagcttctctgtcagaga
ctggaagaacagcttctgaatctggacactgcattgaagaagaaagagagagctgaacga
agacgtgagcgattagtgtatgtgggtatcagcgtggagaacattatacccaatccagac
ggtgatgaagaagatcccatgaccgagaaaaaaaaggatgccaagaaaagtaagagtctg
gggaggcgatcgactaggatgaagaaatccatcagttatagatttgatgattttgatgaa
gccattgatgaagcaatagaggaagaccttcaagattcagaaggaggaggtgctggtcac
ggtaaacctgtagtgactgtcacgagtcagcagcggaacacggtgagccgagagagtcga
cggcatgtgaaacctctcgcgccgcgaaagaagcgtcggcgactcaatgacctggacagt
gacagtacggtggatgaggaggagagcgaggatgagtttcagcttagtgatagcctggag
gaggaggaattcgtagtttcgggagagggtgcgtctgatggtgatgcggggagtgaatgg
ggcagtggtgacagtggcgctgagaatcaaccagcctccagaagaacaggaagaaccgca
ctcacccagagaagcaggaggagcaaacgcagacctcccgctcgacgaagaggctcctca
gaggaggacctgttagactcagaggaagaggaggaggaagaggaaatggaaacagaaggc
tctaatgagttcagcgacagcgacgtggatgtcaacagaaggcgtccgcgacggagtcag
aactctcaggtcaactactacgagacgtcagagtctgagggatcacggaaggtgtccgat
cagaaacaccccactcttcctcaccgtcgacgactgtccagctccaacagtgaagagtcc
acgctttctaaagacttagagccaaaggaatcactcaagagaccagaaagaggacggaag
tgcgagtcgactaggaaagactccaaacctaggcacaaagtaataaaacggactcggcag
gaaagctccagtgaagatgaagaggaggaccgaggagagacagaggactctgaggaggat
gagcagcccctccgcaaaaggtcgaaccgcatagaaacagacgaagacgaggaggaggaa
gaggaaaacaaacgtggaaatgtcagatggaggcacacggccagaaacactgcggacccc
cgaggtcctggccggcacaacggcttggtcccgctgaggaccgcagctcaggatgacgat
gacgatgaggacgaggaagagttcactggcgtcacggaccttgttaactttgttttcgac
agtgaacagttgtcatga
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integrated database retrieval system