Pimephales promelas (fathead minnow): 120473764
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Entry
120473764 CDS
T08155
Symbol
rad21l1
Name
(RefSeq) double-strand-break repair protein rad21-like protein 1 isoform X1
KO
K06670
cohesin complex subunit SCC1
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
120473764 (rad21l1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pprm03036
]
120473764 (rad21l1)
Chromosome and associated proteins [BR:
pprm03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
120473764 (rad21l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rad21_Rec8_N
Rad21_Rec8
SMC_ScpA
Tnp_DNA_bind
Motif
Other DBs
NCBI-GeneID:
120473764
NCBI-ProteinID:
XP_039519696
LinkDB
All DBs
Position
Unknown
AA seq
562 aa
AA seq
DB search
MAVKRHHVTEADTAHITMFYSQLFVSKRGTLAKIWLAAHWEKKITKAQVFECDLEATIKE
ILSPQIKIGLRTSGHLLLGVVRIYSKKTRYLLSDCSDALVKIKVAFRPGQTDLPNDAMEA
TFKTITLPEDFTDFETQLPDPKTIDVVDHFSLNQCRTEDITLKENFGNHFLNIEGIGEEN
QSYQGLFDQSFSVHGDCFGDEEMAVDLIDFIASNTEDALMPDLCDGTPELPATPPPTAVS
AEPESAKTGLLNGRSSPALTETTFLVNAEEGFALAPVAVTPSPTRKRMTRKRKLVIDRSK
ELTDDAIRDQLADCSDLLTPLEIAPPTRQLMEWRTNGGVKQLFSSFCLPILHPDLKQLFP
CDTSPRRQGLKGGARQQADPEEMREQTREAVLENTVEPVLPDWSLLQESVGQDQADNANT
TVETSVIHPEPPPSWNTTSEESRLEVSYPEPVSEISMFGHSSVETRETPLVTQTQSALNS
QDVEDKRLTSRAHDLLQALKRQDSSPNASYSLHALCESSSRSYVAAMFFCLLVLKKQQLL
DLHQSAPYSDIIATPGPLFHSP
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgaagcgacatcatgtaactgaggctgacacggcacacatcacgatgttttat
tcccaactcttcgtctctaaacgaggcacactagccaagatctggcttgcagcccattgg
gagaagaaaataaccaaagcacaagtgtttgaatgtgacctggaggccacgatcaaggaa
atcctatccccccagattaaaattggtctgcgaacgtcaggtcaccttcttttaggagtc
gtccggatatactcgaagaagaccagataccttctctcagactgcagtgatgcgttggtc
aaaattaaagtggcttttcggccaggacagacagacctgcccaatgatgcaatggaggcc
acctttaaaactatcactcttccggaagacttcactgactttgaaactcagctacctgat
cccaagaccattgatgtggtagaccacttctctttgaatcagtgccgcaccgaagatatt
actctcaaggagaactttgggaaccactttctcaacattgaaggaataggggaggagaac
cagtcttatcaaggattgtttgatcagagtttcagtgtccatggcgactgctttggtgat
gaggaaatggctgttgacctcatcgattttatagcaagtaatactgaggatgctctgatg
cctgacttgtgtgatggcactcctgaattaccagctacacctcctccaactgctgtcagt
gcagagccagagtctgcgaaaacaggacttttaaatggtagaagcagtccagccttgact
gagaccactttcttggtcaatgccgaagaaggtttcgctcttgcaccggttgctgtcaca
ccatctccaacaaggaaaagaatgacgagaaagaggaagctggtcattgaccggtcaaag
gaactaactgatgatgccatcagagatcaactggctgactgctctgaccttttaaccccg
ttggagatagccccgcccactcggcagctcatggagtggaggacgaatggaggggtgaag
cagctcttctcgagtttttgccttccaatcttacaccctgacttaaagcagctgttccct
tgtgacacatcacctaggagacagggcttgaagggaggagcaagacagcaagctgacccc
gaagagatgagagagcaaactagagaggctgtcttggagaacactgttgagccggtcctg
ccagactggagtttgctgcaagagtctgttggacaagatcaagcagataatgcaaacact
actgtagaaacttctgtcattcatccagaacctcctccttcctggaacaccaccagtgag
gagagtaggttggaggtgtcgtatccagagcctgtctctgagatctccatgtttggtcat
tcatctgtagagacgagggaaaccccactggtgacacagacacagtcagctctgaacagc
caggatgtggaggataagagactaaccagtcgggcacatgaccttctccaggcccttaaa
agacaagactcttctcccaatgcctcgtacagtcttcacgctttatgtgaaagcagcagc
cgttcatacgtggcagctatgtttttctgcttgctggtgttaaagaaacaacaacttctc
gacctgcaccagagcgccccatacagtgacatcatcgccacacctgggcctctctttcac
tccccctag
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