Pimephales promelas (fathead minnow): 120473839
Help
Entry
120473839 CDS
T08155
Symbol
trip12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120473839 (trip12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pprm04121
]
120473839 (trip12)
Enzymes [BR:
pprm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
120473839 (trip12)
Ubiquitin system [BR:
pprm04121
]
Ubiquitin ligases (E3)
HECT type E3
120473839 (trip12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
TPR_TRIP12_N
WWE
Motif
Other DBs
NCBI-GeneID:
120473839
NCBI-ProteinID:
XP_039519814
LinkDB
All DBs
Position
Unknown
AA seq
2094 aa
AA seq
DB search
MSNRPNSNPGGSLRRSQRNTAAAQPIDHTLAGRLQPEQVNQKANFPPESRRSNSKASKAP
PSSAVGSARGNTSRRNSLSLSVGSHSIPDPDLEAAGTSGQQGRREGSSTRALKRSSATDI
SITFSPSPAKRPKAVSSHLLESSASGPSAPATSPEVTEPKKAPASVSTKSKKRRLAAEPA
PARALSKKSVSYPGPSGVSSTPSQKRKKADASSLSSSSSSLPSSSSAAAPLPPRSEASRA
AKPTKLASKSAASAKAGCSTVTDSSSSCASSSSSSSSSSSAATGANSCAPQGARLKQGKD
QSKARRSRSASSPSPRRSSRDKEQNKAAGSSKFDWTSRFNSKVNLPKPKLSLPGSAKAET
SSKPGPSGLQAKLASLRKSTKKRSESPPAELPSCRRSTRQKTTGSCASTSRRGSGLGKRG
TAEARRQEKMADSDNNQDGANSSAARTEETPQGASASSSVAGAVGMTTSGESESDDSEMG
RLQALLEARGLPPHLFGPFGPRMSQLFHRTIGSGASSKAQQLLQGLQATGDESQQLQAAI
EMCQLLVMGNEETLGGFPVKSVVPALITLLQMEHNFDIMNHASRALTYMMEALPRSSAVV
VDAIPVFLEKLQVIQFIDVAEQALTALEMLSRRHSKAILQAGGLADCLLYLEFFSINAQR
NALAIAANCCQSITPDEFHFVADSLPLLTQRLTHQDKKSVESTCLCFARLVDNFQHEENL
LQQVASRDLLTNIQQLLVLTPPVLSSGMFIMVVRMFSLMCSNCPCLAVQLMKQNIAETLR
FLLCGASNGSCQEQIDLVPRSPQELYELTSLICELMPCLPREGIFAVDAMLKKGSAQTTE
GAIWQWRDDRGLWHPYNRIDSRIIETAHQNGEDEISLSTLGRVYTIDFNSMQQINEDTGT
ARAIQRKPNPLANPNTGGHLEVRREDARAQLMKEDPELAKCFIKTLFGVLYEVYSSSAGP
AVRHKCLRAILRIIYFADADLLKDVLRNHAVSSHIASMLSSQDLKIVVGSLQMAEILMQK
LPDVFSVYFRREGVMHQVKNLAESEVFLTSPPKACTSGTASLCTTTITTATTTAASNVTP
DLGSPSFQHSMDDSLDLSPQGRLSDVLKRKRLPKRGPRRPKYSPPRDDDKVDNQAKSPTT
TQSPKSSFLASLNPKTWGKLGTQTNSANSEPSRTAGVSGLARVPPKDSVSNNRDKIKAWI
KEQASKFVERYFNSESVDGSNPALNVLQRLCNATEQLNLQVDRGAECLEEISNIVSESDV
SSFEIQHSGLVKQLLLYLTSNSERDTVSRDERIKRFLHVFFGCPIPGQEPLGRLDPTENG
PLLSLVNKMNNCLSQMEQFPVKVHDFPSGNGNGSRGSQALKFFNTHQLKCQLQRHPDCTN
VKQWKGGPVKIDPLALVQAIERYLVVRGYGRIREEDEDSDDDGSDDEIDESLAAQFLNSG
SVRHRLQFYIGEHLLPYNMTVYQAVRQFSLQAEEERESTDDEANPLGRAGIWTKTHTIWY
KPVREDEEGCKDAVGGKRGRAQTAPTKTSPRNAKKQDELWHEGVCPSVTNALESYLICGP
PEGITFDDPSMEVILLLRVLHSISRYWFYLYNNAACKEIIPTGEFINSKLTAKANRQLQD
PLVIMTGNIPTWLTELGKTCPFFFPFDTRQMLFYVTAFDRDRAMQRLLDTNPEINQSDSQ
DSRVAPRLDRKKRTINRDELLKQAESVMQDLGSSRAMLEIQYENEVGTGLGPTQEFYALV
SQELQRADLGLWRGEEVSLSNPKGSQEGTKYMFSSRGLFAVPFGRTTKPAHIAKIKMKFR
FLGKLMAKAIMDFRLLDLPLGLPFYKWMLRHESSISSHDLVNIDPGVAKSIQHLEDIIRQ
KKRIEQDRSHTRETLQQALESLNMNGCSVEDLGLDFTLPGFPNIELKKGGKDVPVTIHNL
EEYLRLVVYWTLNEGVSRQFESFREGFESVFPLQHLQYFYPEELDQLLCGSKSESWDVKT
LMECCRPDHGYTHDSRAVRFLFEVLSSFDGEQQRLFLQFVTGSPRLPVGGFRSLNPPLTI
VRKTFESTENPDDFLPSVMTCVNYLKLPDYSSIEIMREKLLIAAREGQQSFHLS
NT seq
6285 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaattccaatccaggggggtcactgcgccgttcacagaggaacaca
gccgcggcccagccaatagaccacacacttgcaggaaggttgcagccagagcaagtaaac
caaaaagcaaatttcccacctgaaagtagaagatctaattctaaggcttccaaagccccg
cccagctctgctgtcggctccgcccgcggcaacacttctcgaaggaacagcctctctcta
tccgtgggttcacactcgatcccagatccagatttagaagcagcaggaacttcaggccag
caagggagacgggagggcagcagcacccgcgctctcaaacgcagctccgcaacagatatc
agcatcaccttttcgcccagcccggccaagcggcccaaagcagtgtccagccaccttttg
gaaagttcagccagtgggccatcggcccccgcaacctcacctgaagttacagagccgaag
aaggctccagcatctgtcagcaccaagtccaaaaagagacgtttagcagccgagccggct
cctgccagagccctgagcaagaagagcgtgtcctaccctggccccagtggggtctcgagc
accccctctcaaaagcgcaagaaggcagacgcctcttcgttgtcgtcctcctcatcctcc
ctccccagctcgagcagcgcggcagcccccctgccaccccgcagcgaggccagccgggca
gccaaacccaccaagctggcgtccaaatcggccgcctcagccaaagctgggtgtagcacc
gtgactgactcctcctcttcctgtgcctcttcctcatcctcctcttcctcttcctcctcg
gccgccacaggcgccaacagctgtgcccctcagggtgcccggctaaagcagggcaaggac
cagagcaaagcgcggcggtcgcgctccgcctcctcaccttcccctcgtaggagcagtcgg
gataaagagcaaaacaaggctgccggctcctccaagtttgactggacgtcccgattcaat
tccaaagtcaacctgccaaagcccaaactgtccctgccgggatcggccaaggctgagacc
tcctccaagcctgggccctccggtctgcaggccaaactagcaagtttgaggaagtccact
aagaagcgtagtgagtctcccccagcagagctccccagctgtcggaggagcacacgtcaa
aagaccacgggctcttgcgccagcaccagtcggcgaggctcaggcctgggcaagcgcggg
acagccgaagctcgccgacaggagaaaatggccgactctgacaacaaccaggatggggcc
aattcatcggccgcgcgcacagaggaaacaccccaaggggcgtcagcatctagctcagta
gctggagctgttggcatgaccacctctggagagagtgaatcagatgattctgaaatggga
agactgcaagctctgctggaggccaggggtcttcctcctcacctgtttgggccctttggg
ccccgtatgtctcagctgtttcataggaccattgggagtggagctagctcaaaggcacag
cagctgctgcagggtctgcaggctacaggtgatgaatcccagcaactccaggctgctata
gagatgtgccagctgctagtgatgggtaacgaggagacgttgggaggcttccctgtcaag
agtgtcgtacctgccctgatcacactgttacagatggagcataattttgatattatgaat
catgcatctcgcgccctcacctacatgatggaggctctgccacgctcctcggctgtggtg
gtagacgccatcccagtcttcctggaaaagcttcaggtaattcagtttattgatgtggca
gagcaagccttgaccgccctggagatgttgtcacggaggcacagcaaagccatcttacag
gctggaggtctggctgactgtttgctttacttggagttcttcagcatcaatgctcagagg
aacgcattagccatcgctgctaactgctgccagagcatcacgccggacgagtttcacttt
gtcgctgactctctgcccctgctcactcagagactcacacaccaggataaaaaatctgtc
gaaagcacttgtctctgttttgccaggctggtggacaactttcagcatgaggagaacctg
ttacagcaagtggcgtcacgggacctgctgaccaacatccagcagctgctggttctcact
ccacctgtgctcagctctggcatgttcatcatggtagtgcgcatgttctctctcatgtgc
tccaattgcccatgcctggctgtgcagctcatgaaacagaatatagcagagactcttcgt
ttcctgctatgtggagcatccaatgggagctgtcaagaacagattgaccttgttcccaga
agcccccaggagctttatgaactcacctcgcttatttgtgagctgatgccatgtctgccc
agagagggcatctttgcggttgatgcaatgcttaagaaaggaagtgcccagactacagag
ggcgccatctggcagtggagagatgacagaggcctgtggcacccgtacaaccgcattgac
agccgtatcattgaaaccgcacaccagaatggagaagatgaaataagtctgtcgacactc
ggccgtgtctacaccattgacttcaactctatgcagcagataaatgaagacactggcact
gcccgtgccattcagaggaaacccaaccctctggccaaccccaacacaggagggcacttg
gaggtgcggcgagaggacgcacgtgctcagctgatgaaagaggaccctgagctggccaag
tgcttcataaagactctgtttggggtcctttatgaggtgtacagttcctcagccgggcct
gccgtcagacacaagtgccttagagccatcctccggatcatctacttcgcagatgcagac
ctgcttaaagacgtactgcgcaatcatgctgtgtctagtcacatagcttccatgctgtcg
agtcaggacctgaagattgtagtgggctctctgcagatggctgaaatcctcatgcagaaa
ctaccagatgtattcagtgtttatttcaggcgtgaaggtgtgatgcaccaggtaaagaac
ctagccgaatccgaggtgttcctcaccagccccccgaaagcgtgcaccagcggcacagct
agtctttgcaccaccactatcaccacggcaaccactacagctgcctcaaacgtcacaccc
gacttgggctcccccagtttccagcacagcatggacgactcgctggacctcagtcctcaa
ggtaggttgagtgatgttctgaaaagaaaacgccttcctaaaagaggaccgaggcgtcca
aagtactccccacccagagatgatgacaaagtggataatcaggctaagagtccgacaacc
acacaatcccccaagtcttctttcctggccagtttgaatcccaagacctggggtaagctg
ggaactcagacaaacagcgctaactcagagccctcacgcactgctggggtcagtggtctg
gcaagagtaccgcctaaggactctgtatcaaacaacagggataagataaaggcttggata
aaggaacaagccagtaagtttgtggaacgttacttcaattctgaaagcgtggatggaagc
aaccctgccctgaatgtcctgcaaagactctgcaatgccacagaacagttgaacttacag
gttgaccgtggtgcagagtgtctagaggagataagcaatattgtatctgaatcggacgtg
tcctccttcgagatccagcacagtgggcttgtgaagcagctgttgttgtatctgacatca
aatagcgaacgggacactgtcagtagagatgagagaatcaagaggttcctgcatgtgttc
ttcggctgcccgataccagggcaggaacctctgggacgtttggacccaacagagaatggc
ccactgctatctctggtgaacaagatgaacaactgccttagtcagatggaacagtttcct
gttaaagtgcatgattttcccagtggaaatggcaatggaagcaggggttcgcaagccctt
aagttctttaacactcatcagctgaagtgccagctgcagagacacccagactgcaccaat
gtaaagcagtggaagggtggcccggtcaaaattgaccccttggctctggtacaggctatc
gagagatacctcgtggttagagggtatggaaggatcagggaggaggatgaagacagtgat
gatgatggttccgatgatgagattgatgaatctttggctgcccagttcttgaattctggg
agtgtacgtcacaggctacagttctacataggagagcacttgctaccatacaacatgact
gtttatcaggccgtcaggcagttcagcttacaggccgaggaggagagagagagcacagat
gatgaagcaaaccctctgggacgtgctggcatctggaccaaaacacacactatatggtat
aagccagtaagagaggatgaggagggctgtaaagacgctgttggagggaagaggggtcgt
gcacaaacggctcccactaaaacctcccctcgaaatgccaaaaaacaagacgaactgtgg
catgagggtgtgtgtcctagtgtgacaaacgcattagagtcgtacctcatttgtggtcct
ccagagggcatcacttttgatgacccttccatggaggtgattctgctgctgagggttttg
cactccatcagtagatactggttctacctgtacaacaatgctgcatgtaaggagatcatt
cccactggtgagtttattaacagtaaactgacagcaaaggccaacagacagttgcaggat
ccactggtcatcatgacaggaaacatcccgacctggctcactgagctcggcaagacatgt
ccgttcttcttcccatttgacacacggcagatgctcttctacgtgacggcatttgaccgt
gatcgtgccatgcaacgtctgcttgacaccaaccctgagattaaccagtccgactcacaa
gacagccgtgtcgctccacgccttgacaggaagaagagaacgataaaccgggatgagctc
ctgaagcaagcggagtcagtaatgcaagatctcgggagttccagagccatgctggaaatt
caatacgagaatgaggtgggtacaggtctcggtcctacgcaagagttctatgctctggtg
tctcaggagttgcagagggctgatttgggtctttggagaggagaagaagtctctctctcc
aatcctaaagggagtcaggagggtaccaagtatatgttcagttccaggggtttgtttgct
gtaccgtttggacgaactaccaaaccagctcacatcgccaagatcaaaatgaagtttcgt
tttcttgggaaactcatggctaaagcgatcatggacttcagattgttggacttgcctcta
ggtttgccattctataagtggatgctgaggcacgagtcctccatcagctctcacgaccta
gttaacattgatcctggtgtcgccaaatccatccagcacttggaggacatcatccgccag
aagaagagaatagagcaggacagatcacatacgcgggagaccctgcagcaggccttggag
agtctcaacatgaacggctgctcggtggaagatctagggttggacttcactctgcctgga
ttcccaaacatagagttgaaaaaagggggcaaagacgtgccagtcaccattcacaacctg
gaggaatacctcagattggtggtctactggacactcaatgagggcgtctctcggcagttt
gagtcgtttagggaaggattcgagtctgtttttcctttgcaacacctgcagtacttctat
cctgaagagctggatcagttgttatgtggcagtaagtcagagtcctgggatgtgaagaca
ctaatggagtgctgcagaccagaccacggctacacgcacgacagccgtgcagtgcggttc
ctgtttgaggtgctgagcagttttgatggggagcagcagagacttttcctgcagtttgtc
acagggagccccagacttcctgtcggaggattccggagtttgaaccctcccctcaccatc
gtccggaagacgttcgagtcgacggagaacccagacgacttcctcccgtcggtgatgacg
tgtgtgaactacctgaaactgccggattactccagcatcgagatcatgcgcgagaaactg
ttgattgctgcgcgcgagggccagcagtctttccatctgtcttga
DBGET
integrated database retrieval system
