Pimephales promelas (fathead minnow): 120473842
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Entry
120473842 CDS
T08155
Symbol
si:cabz01101003.1
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD isoform X1
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04217
Necroptosis
pprm04622
RIG-I-like receptor signaling pathway
pprm04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
120473842 (si:cabz01101003.1)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
120473842 (si:cabz01101003.1)
04625 C-type lectin receptor signaling pathway
120473842 (si:cabz01101003.1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pprm01002
]
120473842 (si:cabz01101003.1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pprm04121
]
120473842 (si:cabz01101003.1)
Enzymes [BR:
pprm01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
120473842 (si:cabz01101003.1)
Peptidases and inhibitors [BR:
pprm01002
]
Cysteine peptidases
Family C67
120473842 (si:cabz01101003.1)
Ubiquitin system [BR:
pprm04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
120473842 (si:cabz01101003.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAP_GLY
UCH
Motif
Other DBs
NCBI-GeneID:
120473842
NCBI-ProteinID:
XP_039519818
LinkDB
All DBs
Position
Unknown
AA seq
925 aa
AA seq
DB search
MSGDAHHSRRPRPPKMYMVASDYRVQDQLEGTIRLQRGQLCVEQEGGGHRGGRGYLWVKV
IDSGCVVKVEREVLSEVSRELAGLLEPVPELDVRVKLLSRPQALHRFLSLPLGSELRVSW
SHSQSELAEAQLRYRGPLTRGSSAVYFGVELKGWAAGRGKCNGIYKGRQLFVCPDGCGLF
LPVSEISLPRSSRSSSDPLSVQSRSAECVSPLAVGQRVCFPQDECVQRGTVQFCGPLSSR
ASSTLYVGVLLDQAVGSWDGYYKNTKLCSIPSPEFGALLPLSKVTAETRSERPPLTVINP
RPLPKLPLSPPGNKPTPQMTTPSSPGITPTSIVATPTSQMLTPTDRPLIQAAMLVTAKKA
LQPPSSSVPKAALKPPPLAPPTKPQVPPTRPQALPTSPPTDHSRSPNGFHNLPSPPIAEQ
RAEHGAWLEVGSMVEVNDPPLFGVIRWIGQISGLSEPVAGIELDQELSAATDGSYLSERH
FRCPANKGLFVKLRNCRRDSRFPEPELPINQVDRCNSIAFANWSSERVEDNTPPVSGLDA
RVTYEGFKKGIQGHLNSCYLDATLFSMFSCCSSFDWLLFWPTGSAHSKSAQDLLRCEIVN
PLRRFGYVCASKTMALRKLLKAETADSGFTNEEKDPEEFLNQLFLLLRVEPLLKIRSASQ
QPQECFLYQLFPPSVSASPPSPILSPVSPLASPALLRVANVQALLESSFIHSGLKFTEAP
SCLPLLMPRFGKEFKMFDAILPSLTLDITDLLDEALRQCSICQLVAQWECLQCYEDVDIT
PGQLKQYCSTCNIQVHTHKKRQMHRPVQIRVPQGSWEGGPVYGTRQVMDLCAVTCIETSH
YVSFVKHGPEPTDWLFFDSMADREGGENGFNVPQVRACPEVGRYLSLSSEEFARLDSSSL
RDPVRRLLCDAYMCLYHCPQLSLYK
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcgacgcgcatcacagtaggaggccacgcccccccaaaatgtacatggtcgcg
tccgactatcgagtgcaggaccagctggaaggaaccattcgcctgcagcgggggcagctg
tgtgtggagcaggagggaggaggacacaggggtggaagaggatacctgtgggtgaaggtg
attgacagcgggtgtgtggtgaaggtggagcgtgaggtgctcagtgaagtgtcccgtgag
ctcgctggtctcctggagccggtcccggagctggatgtgcgagtgaagctgctgtctcgg
ccccaggccctgcaccggttcctctcgctgccgctggggtccgagctcagggtctcctgg
agccacagccaatcagagctcgccgaggcccagctgcggtaccgcgggcccctgacccga
ggaagctccgccgtgtacttcggggtcgagctcaagggatgggccgcaggtcgggggaag
tgtaacggcatctataaaggtcgtcagctgttcgtgtgtcccgacggctgtgggctgttc
ctgccggtcagtgagatcagcctccctcgatcctctcgctcctccagcgacccgctgagc
gtccagtcccgatccgcagagtgtgtgtccccgctcgccgtcggccagagagtgtgtttc
ccgcaggacgagtgtgtgcagcgcgggaccgtgcagttctgcggacccctgtccagccgg
gcctccagcaccctttatgtgggagtgttactggatcaagctgtgggatcatgggatgga
tattataaaaacaccaaactgtgctccatcccgtcgcctgagtttggggctttacttccc
ctttccaaagttactgcagaaactcgatctgaacggcctcctctgacagtaatcaatccc
agaccgcttcccaaactgcctctgtcgccccccggcaataaacccaccccccagatgacc
acgccctcctctccagggatcacgcccacctccattgtggccacgcccacctctcagatg
ctcacgcccacagacagacccctcatccaggcggccatgttagtgacggctaaaaaagcc
ctccagcctccgtcgtcctctgtgccaaaagccgctctgaaacctcctccgctggccccg
cccaccaagcctcaggtcccacccaccaggcctcaggccctgcccacgtccccgcccact
gaccactcgcgctcgccaaacggattccacaacctcccctctccaccaatcgctgagcag
agggcggagcatggcgcctggttagaggtgggatcaatggtggaagtcaatgacccgccc
cttttcggagtgattcgctggattggacagatcagcggcctatcagagccagtcgctgga
atcgagctggatcaggagctgtccgccgctacggatggcagttacctcagcgaacgccac
ttccgctgtcccgctaataaagggctgttcgtcaaactgaggaactgcagacgcgactcc
aggttcccggagcccgagctgcccattaatcaggtcgatcgctgcaactccatcgcgttt
gctaactggagcagtgagcgtgtggaggacaacactcctcctgtgtcgggtctggacgcc
cgggtgacgtacgagggcttcaagaagggcattcagggtcacctgaactcctgctacctg
gacgcgactctcttcagtatgttctcgtgctgcagctcgtttgattggctgttgttctgg
cccacgggttcggcccacagtaagagcgctcaggacctgctgcgctgcgagatcgtcaat
cctctgcgcaggttcggctacgtgtgtgccagtaaaactatggctttacgtaaactactg
aaagcagaaacagctgattcaggatttaccaacgaggaaaaagatcctgaggaattcctc
aaccagcttttcctgcttctccgggttgaaccacttctgaagatcaggtcagcgagtcag
cagccgcaggagtgtttcctctatcagctgtttcctccgtcagtctcggcgtctcctccg
tctcctattctctctcccgtgtctccgctcgcgtctccagcgctcctgcgagtggcaaac
gttcaggccctgctggagtcctcctttatacactctggtctcaagttcacagaggctccg
tcctgtttgccgctcctcatgcccagattcgggaaagagttcaagatgtttgacgccatc
ttgccctcgctgaccctcgacatcacggacctgctggacgaggctcttcggcagtgcagt
atctgtcagctggtggcacagtgggagtgtctgcagtgttacgaggatgtcgacatcaca
cccggccagttaaagcagtattgcagcacctgcaacatacaggttcacacacacaagaag
cgtcagatgcaccggcccgttcagatccgggtgccacagggctcctgggagggaggtcca
gtttacgggactcggcaggtcatggacctgtgcgccgtcacatgcatcgagaccagccac
tacgtgagcttcgtcaagcacggccctgagcccacagactggctcttcttcgacagcatg
gccgacagagagggaggagagaatggctttaacgtaccgcaggtgcgagcgtgtccggag
gtgggccggtacctgagtctctcctcagaggagttcgctcgcctcgactcctcctcgctc
cgggatcctgtgcgtcgtctgctgtgtgacgcctacatgtgtctctaccactgtccccaa
ctcagcctatacaagtga
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