Pimephales promelas (fathead minnow): 120473916
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Entry
120473916 CDS
T08155
Name
(RefSeq) guanine nucleotide exchange factor subunit RIC1-like
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprm04131
]
120473916
Membrane trafficking [BR:
pprm04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
120473916
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIC1
Motif
Other DBs
NCBI-GeneID:
120473916
NCBI-ProteinID:
XP_039519914
LinkDB
All DBs
Position
Unknown
AA seq
1364 aa
AA seq
DB search
MARSIKIKQNYQPIRTAYGQAANGYVLLFDILGGLDEKYLYEPVYPKGSARVKVTPGYKE
EQCAPALTLEMKKPVDLEAPISCLQTLQEDLLVATADGFLHMLHWDSVSNGRRAVNLCTV
PFSLDLQSSRGGPCLDLEGVYIRDMEYCSTLDGFAVVFDDGRLGFITPTANRLATDQLQG
VWATDVSDGTCVAVNNKYRLMAFGCASGSVLVYMIDSSTGSMQLSHKLELTPKHYPDVWN
KTGPVKMIRWSPDCSVAMVTWDCGGLSLWSVFGAHLICTLGEDFAYRSDGTKKEPLKISS
MSWGVEGYHLWVISSSDSTPVEAEGDEKLQQASILQFQFIKSALTVNPCTSNQEQVLLQG
EDRLYLTCGDPTQAHSGSDKSSSRDTGTPLHRPSASTPVSQGLSTLLGHKHWQVVQIHST
YLETNWPIRFAAIDWSGQCVAVAGRRGFAHYSLYSRKWKLFGNVTQEQNMAVTGGLAWWN
DFVVIACYNFIDRQEELRLYVRSANLDNAFASVTKLHADTLLLNVFRNVVILFRADCSIC
LYSIERRHDSPSPSASVELLQEISMSRYIPHPSLVVSVTLTSVRTETGITLKAPQQACSA
ESILLNLAGQLIMLQRDRSGPQVREKDTPANQTMLPFCAPVVLAQCVENVWTTCRSNRKK
RHLMEALWLSCGEAGMKVWLPLFPRDHRKPHSFLSRRIMLPFHINIYPLTVLFEDALILG
ASNETMLFDGLSSSSEPLETLFPFCTVERTSQIYLHHILRQLLMRNLGEQALMLAQSCAM
LPYFPHVLELMVHVVLEEEATSREPIPDPLLPTVAKFVTEFPLFLQTIVHCARKTEYALW
NYLFAAVGNPKDLFEECLMAQDLDTAASYLIILQNMEVPAVSRQHATLLFNTALEQGKWD
LCRHMIRFLKAIGSGESETPPSTPTTQEQSSTGGFEFFRNRSISMSQSADGIAGGKFNLQ
KTLSMPSGPSCKGGERWCKDTDSAENLYIDVMLWRHARLLLEQVRLRDLGCFSAQLGFEL
IGWLCRERTRVARVEDFVTALKCLHKDFLWPFPVIPACSVSSPLKNGRCRPVLSSRLLKS
QSADSLLNSDMDTTPPQVTPANHSWLDGLGAVSKELNSASSHGGPQTQEAFLSPLINKGE
EYSIGSATDLTETSSVVDGDWTMVDENFSTLSLSQSELEHISMELANKGPHKSQVQLRYL
LHVFMEAGCLEWCVIIGLILRDASVIKQVVGFLDSAEVPAETVQSIKAGLMAVDHWVSSD
CLGYKPFLHLIGPQLLKLSEVPEEPVQPEPFQPSGDSEPEPRAEDTRGVVTSAHPLRPRG
VVTSAHPLPLDGPCGASARPLEDTPEEPEQQEALEEGAYDCTLS
NT seq
4095 nt
NT seq
+upstream
nt +downstream
nt
atggcgagatcaatcaaaatcaaacaaaactaccagccaatcagaacagcgtatgggcaa
gctgcaaacggttacgttctgttgttcgacattctcggcgggttggatgagaagtacctg
tacgagcctgtctatcccaagggcagtgctcgtgttaaggtgactccgggctataaggag
gaacagtgcgctccagctctgactctagagatgaagaaacctgtcgacctggaggctcct
atcagctgtctgcagacgctgcaggaggatctgttagtggcgacggctgatggtttcctc
cacatgttgcactgggacagtgtcagtaacggcagaagagcagtgaacctgtgcaccgtt
cccttctccctcgacctgcagtcctccagaggagggccgtgtttggacctggagggcgtt
tacattcgggatatggagtattgctctacgctggacgggtttgctgtcgtgtttgatgac
gggagactcggattcatcacgccgactgcaaacagactcgccactgaccagcttcagggc
gtttgggccactgatgtctctgatggcacgtgtgtcgccgtcaacaacaaatacagacta
atggccttcggctgcgcaagcgggtcagtgttggtctacatgattgacagctcgacggga
tccatgcagctctctcataaactggagttaacccctaaacactacccagatgtgtggaat
aaaacgggcccggtgaagatgatccgctggtcccccgactgcagcgttgcaatggtgacg
tgggactgtgggggcttgtccctgtggagtgtgttcggggctcatctcatctgcacactc
ggagaggacttcgcttatcgctcagacggcacgaagaaggagcccctaaagatcagctct
atgagctggggtgtggaggggtaccacctgtgggtgatcagcagctcagactcgactcct
gtggaagcagaaggagacgagaagctccaacaggccagcatcctgcagttccagttcatc
aagagcgcgctgaccgtcaacccctgcacgagtaaccaggagcaggtgctgctgcaggga
gaggaccgtctttatctgacctgtggagacccgactcaggctcacagcgggtcggacaag
agttcgtctcgggacactgggactcctctgcaccggccctcggcctccacgcctgtctct
cagggccttagcactttactgggacacaagcactggcaggttgttcagatccacagcaca
tatctggagacgaactggcccatcaggtttgcagcgatagactggtctggtcagtgtgtg
gccgtcgctggtcgccgtggatttgcacattattccttatattccaggaaatggaaattg
ttcggtaacgtcacacaggagcagaatatggcggtgacgggcggtctcgcgtggtggaac
gactttgttgttattgcgtgttataatttcatcgaccgacaggaagagctgaggctgtac
gtgcgctcggctaacctggataatgcgtttgctagcgtcaccaaacttcacgctgacacg
ctgttgctgaacgtgtttcgtaacgtggtgattctgttccgggccgactgctctatctgc
ctgtacagcatcgagagacggcacgacagcccgagcccgtcggccagtgtggagctgttg
caggagatttcgatgtctcgttatattcctcaccctagtctagtcgtgtccgtgaccctc
acgtcagtgcggaccgagaccgggatcacactcaaagccccgcagcaggcctgttcggct
gagagtatcctcttgaatttggctggtcagctgattatgctgcagagagaccgatccggg
ccacaggtgcgagagaaggacacgccagccaatcagacgatgctgcctttctgtgcgccg
gtggttctggctcagtgtgtggagaacgtgtggaccacctgccgaagcaaccgcaagaaa
cgccacctgatggaggcgctgtggctctcgtgcggagaggcggggatgaaggtgtggctc
cctctgtttcccagagaccaccgcaaaccccactcgttcctgtcgcgccgcatcatgcta
cccttccacatcaacatctacccgctaaccgtgctcttcgaggacgcgctaatcctcggc
gcatccaacgaaaccatgctattcgacggcctgagctcgtcctccgagccactggagacg
ctcttcccgttttgcacggtggaacgaacatctcagatctatctccatcatatcttacgc
cagctgctaatgcgtaacctgggcgagcaggctctaatgctagcgcagtcgtgcgcgatg
ctgccgtacttcccgcacgtgctggagctcatggtgcacgtggttctggaggaggaggcc
acgtctcgagagcccatccccgacccgctgctgcccactgtggccaagtttgtcaccgag
ttcccgctgttcctgcagaccatcgttcactgcgcgcgcaagaccgagtacgcgctgtgg
aactacctgttcgccgccgtcgggaaccccaaagacctgttcgaggagtgtctgatggcg
caggatctggacacggccgcgtcgtacctgatcatcctgcagaacatggaggttccagcg
gtgagccgtcaacacgccactctgctcttcaacacggccctcgaacagggcaaatgggat
ctgtgtcgtcacatgatccgcttcctgaaggccattggttcaggggagagcgagactccg
cccagcacacccaccacacaggagcagagctctacgggaggctttgagttcttccgtaac
cgcagcatcagtatgtctcagtctgccgacggcatcgcaggagggaagttcaacctgcag
aaaaccctgagcatgccctccggcccgtcctgcaaagggggcgagcgctggtgtaaggac
actgactccgcggagaacctctacattgacgtgatgctgtggagacacgctcggctgctg
ctggagcaggtccggctgcgggacctcggctgcttctccgctcagctgggcttcgagctg
attggctggctgtgtcgggagcgcacgcgagtggctcgcgtcgaggatttcgtcaccgcg
ctcaaatgcctgcacaaggacttcctgtggccgtttcccgtcatcccagcatgctctgtt
agctcgccgctgaagaacggacgctgccgcccagtgttgagttctcgcttgctgaagtct
cagtctgcggacagtttgctgaacagtgacatggacaccacgccccctcaggtcacccca
gccaatcacagctggcttgacgggttgggggcggtgtccaaggaactaaactccgcctcc
tctcacggaggaccgcagacccaggaggcttttctctctcctcttattaacaaaggagag
gagtacagcatcggttcagccacggacctcactgagaccagttcagtggtggatggtgat
tggacgatggtggatgagaatttctccaccctcagtctcagccaatcagagctggagcac
atctctatggagctggccaataaagggccacacaagagtcaagtgcagctcaggtatctc
ctgcacgtgttcatggaggcgggctgtctggagtggtgtgtgatcatcgggctgatctta
cgggacgccagcgtgatcaagcaggtcgtgggcttcttggacagtgctgaggtgccggca
gagacggtgcagagcatcaaagccgggctgatggccgtcgaccactgggtctcctctgat
tgcttgggctacaagccgttcctgcacctgattggcccgcagctgctgaagctctcagag
gttcccgaggagccggttcagccggagccgttccagccgagcggggactccgagcccgag
cccagagccgaggacacacgcggggtcgtgacctctgcccacccgctgcgaccccgtggg
gtcgtgacctctgcccacccgctgcccttggacggcccctgtggtgccagcgctcgaccc
ctggaggacacacctgaggagcctgagcagcaggaggccctggaggagggggcgtacgac
tgcactctctcatga
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