Pimephales promelas (fathead minnow): 120473929
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Entry
120473929 CDS
T08155
Name
(RefSeq) UHRF1-binding protein 1-like isoform X1
KO
K28453
bridge-like lipid transfer protein family member 3A
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprm04131
]
120473929
Membrane trafficking [BR:
pprm04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
120473929
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BLTP3A_B
VPS13_N
DUF7770
Motif
Other DBs
NCBI-GeneID:
120473929
NCBI-ProteinID:
XP_039519926
LinkDB
All DBs
Position
Unknown
AA seq
1364 aa
AA seq
DB search
MAGIIKKQILKHLSRFTKNLSPDKINLSTLKGEGQLSNLELDEEVLQNMLDLPTWLAVTR
VYCNKAAIRIQWTKLKTSPICLFLDKVEVEMRTCEEPRPPNGPSPIAITAGQSEYGFAEK
VVEGMSVIINSITIKVQARAFHASFELWQLQGCSLNPAWQKSDLRNTRIAHPKTGEVLTF
KEINWQSLRIEADAIESDEQDLGSTPLRLITNQGRIRIALKRRVKDCNVLASKLFFILDD
LLWVLTDSQLKAIIHYAKSLSEAMEKSAQQRKSMAAETLQTAPPSPGIHSLWTEPPPPEA
VGSPDTLAQCFDLHDVKESSYHTFISRLDLHICNDSSSDSDEPPPPGTQGAMQLTLRKLG
WDYYPFHRPGEGCRHWERHCGAMESRAQWATKLLQDFQKTMEDLGIPGPHTEPNVSAKDS
PAKKVKADGESLSNFSPERTPTSRRTSAAAPSSGSALKKLRSSCLVIRVDDLDIHQVSTG
GRHSKRTQSLLSCNRKSLHLPENTPAIHLQFTEYYFPDKPGLPGVLVPCSNLYAQLNGLQ
LCLDAPSILWMTLFSRGLHRTLDQVKAFYHLQDSSKTDEHIDIRLDATQLKLVIPLESSI
MDHPDRPQSLSISLPQTVLSNTRHSPHGSLSDLNSTYSSFSACPFFHPTACQPFPRDQSL
LHPLPSAFLQRFLDDESLSLEHKRPSRSQDVWSVSLSRVSLGFEGARRGLRGKALPFVEP
FAMSLWLCHPSAFKKDSHCSSIDDDSKSPTGSSKHPLLDSPQLVNDVISDKFDQTDGLVN
SPLASIHILAQSITPVKMWLNHYQFVALLRMKDYLARLAGDLTKDFQGLGQSPHKPSDPP
SVCVSFLMEAMEFALLLPPATCEPGEAHSPVETDTPSLTDSDLSPSHHVGESGLLEDSGT
RGNEDQEDDPEQEGSVEEAYEAIEEGIDGQTGQDGYAQAVVPAMSPLLAPVNPTLLSRHS
STFSLEGELSSALNATRGVTKDLTKGALSMTKDAFSLLSRGSGMTKLFSQNKEQSSRPEE
SSPSFMGNLRLHSMKQSPSQNSYDSAILESSLADDGLSIDSDISENFVILMDSESGVESL
RPNGTGVLSGSCVSPAPGTEGGSSADLSSSLSQSIEDIAQDMVSVLVVCLSRMECLMEMR
GEDIVVALEAQELVPKQQGNHKLTDLLVGLTLMQAAASSPLSPGPRPPSRPPAAALRLEM
GPCAARHSPLSESVGFMEMCLTGCRAELLASTLNTLGPFLEDELSADPQPMRLWLRDTAI
TLKDDNPPVFPTAPQPVPVLFSLDGIVLERLDDGILRLRPAQSQSGIETEVDQERADQSC
FRAEENNKSLESKLTDVQSALEKALSDRERLLQEVRKHNPSFTL
NT seq
4095 nt
NT seq
+upstream
nt +downstream
nt
atggccggaatcattaaaaagcagatcctgaagcatctgtccaggttcactaagaacctc
tccccggataagattaacctgagcacactgaagggagagggtcagctgtccaacctggag
ctggatgaggaggtcctgcagaacatgctggatctgcccacctggctggccgtcacccgc
gtctactgcaacaaggctgctatacggatacaatggacgaagttgaagaccagtcccata
tgtttgttcctggataaagtagaagttgaaatgagaacctgtgaagaaccgcggccccca
aacggcccttccccaatagccatcactgcaggccaaagtgagtacggcttcgctgagaag
gttgtggaaggaatgtctgtgatcatcaactccatcacgattaaagttcaggcccgagcg
tttcacgcctccttcgagctctggcagctccagggctgcagcctcaaccccgcgtggcag
aagagcgacctccggaacacacgcattgcacatcctaagacaggagaggtcctgacgttc
aaagagatcaactggcagagtctgcgcattgaggccgatgcgatcgagagtgacgaacag
gatctgggcagcacgccacttcgcctcatcaccaaccaggggcgtatacgcatcgctctc
aaacgcagggtgaaggactgcaatgtcttggcctctaagctgttcttcatactggatgat
ctgctttgggtgctgacagactcccagctcaaggccatcatccactacgccaagtctctg
agtgaggccatggagaagtccgcgcagcagaggaagagcatggctgctgaaacactacag
actgcgcctccctctcctgggatccactctctgtggactgaacctcctccacccgaagcg
gtcgggagtcctgacacactggcccagtgtttcgacctccatgacgttaaagaatcatct
taccacactttcatctcccgtctcgacctgcatatctgcaacgacagctcttcagattct
gatgaacctccgcctccaggaacacagggtgcgatgcagctgaccctccggaagctgggc
tgggattactaccctttccacagaccaggtgagggctgccggcactgggagcgtcactgc
ggggcgatggagtctcgtgctcagtgggccaccaaactgctgcaggactttcagaagacc
atggaggatctgggcatccctgggcctcacacagaaccaaacgtgtctgctaaagactcc
ccggccaaaaaagtcaaagcagacggggaatcactgtctaatttcagtcctgagcggact
ccgacctcgcgccggacatcagcagccgccccgtcctcaggaagcgcactgaagaaactt
cgctccagctgtttggtgatccgcgtggacgatctggacatccatcaggtgtccaccggg
ggccgtcacagcaagagaacgcagtctctcctctcctgcaaccgcaaatcccttcatctc
ccagaaaacactcctgcaattcacctccaattcactgaatactacttccctgataagcct
ggacttcctggtgtcttagtgccctgctctaatctttatgcccagctgaatggtctgcag
ctgtgtctggatgctccaagcatcttgtggatgactctgttttcacggggtctacacagg
accctagatcaggtcaaagccttttaccacctccaggacagcagcaagacagatgaacac
atcgatatccgcctggatgcaacacagctgaagctggtcattcctctggaatcctccatt
atggatcacccagaccgccctcagtcattgagcatcagtcttccccaaaccgtcctcagc
aacacgcgtcactctcctcacggttccctttcggacctcaacagcacctacagcagcttc
tccgcctgtcctttcttccatcccacagcttgccaaccgttcccccgcgatcagagcctc
ctacatcccctcccatcagcattccttcaacgctttctagatgacgagtccctgtcgtta
gagcataaacgtccctctcgctcgcaggacgtctggtctgtcagtctgtcccgagtgtct
ctaggctttgagggggctcgtcgagggctcagagggaaagcccttccctttgttgagccc
tttgccatgtctttgtggttgtgccacccttctgccttcaaaaaagattctcattgttca
agtatagatgatgattcaaaatcccccactggttctagcaaacatcccctccttgactca
ccacagcttgtaaatgacgtcatatctgataaattcgaccagaccgatggtctagtcaac
tctcctttggcctccatccatatcttggcccaatcgatcactcctgtcaaaatgtggctc
aaccactaccaatttgtagcccttttgcgaatgaaggactaccttgcccgacttgctgga
gatttgaccaaggacttccagggtttgggacaatccccacataaaccttcagatcctcct
tcggtttgtgtctcgttcctgatggaggcgatggagtttgctctacttcttcctcctgca
acgtgtgagccaggagaagcccattccccagtggaaacggacactcccagcttgacggac
tctgatctctcgccatcgcaccatgttggtgagtctggcctactggaggacagtgggaca
cgagggaatgaggatcaagaagatgatcctgagcaggagggttcggtagaggaggcttac
gaagccattgaagagggaatagatggacaaacaggccaggatggttacgctcaggccgtt
gttcctgccatgtctcctctgcttgctcctgtgaatcctacattactgtcccggcatagc
tccactttcagcttggagggggagctatccagtgccctgaatgccaccagaggggtcacc
aaagatctcaccaaaggggcgctgtccatgacgaaagatgccttcagcctcctgagccga
ggatctggcatgactaaactcttcagtcaaaacaaggagcaaagctcacggccagaggag
tccagtccctccttcatggggaacctgcggcttcactccatgaaacagtcgccttcccag
aattcttatgacagtgccattttagagagcagtctggcggacgatggcttatccattgat
agtgacatcagtgaaaactttgtcatcctaatggactctgagtctggtgtggagtctttg
cgtcctaatggtacaggtgtcctctcgggaagctgcgtgagtcccgctccaggaacagaa
ggtgggtcatccgcagacctcagcagctctctgtcccagagcatcgaagacattgcccaa
gatatggtgtctgtgttagttgtgtgtctgagtcgaatggagtgcctgatggagatgcgc
ggtgaggatatcgtggtggcgctggaagcccaagagcttgtgcctaaacaacaaggcaac
cacaaactcacagacctgctggtgggactgacactgatgcaggctgctgcttcctctcct
ctgtctccgggccctcgccctccctcccggccccccgcagcggccctcaggctagagatg
ggcccgtgtgccgccagacactctcctctctccgagagcgtggggttcatggagatgtgc
ttgacggggtgcagagcagagctcctggcttctaccttaaacacactgggacccttcctg
gaggatgagctcagtgcagacccccagccaatgagactgtggttacgggacactgctatt
acactaaaggatgataatcctccagtcttcccaactgctcctcaaccagttcctgtgctc
ttctccctggacggcattgtgctggagcgtttggatgatggcatcctccgcttgagacct
gcgcagagccaatcagggattgagacagaagtggaccaagagagagctgaccaatcctgc
ttcagagctgaggagaacaacaagtctctggagtccaaactcactgacgtccagtcggct
ctcgagaaagctctgtcggaccgagagcgcctgctacaggaagtcaggaaacacaacccc
tcattcaccttatga
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