Pimephales promelas (fathead minnow): 120473934
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Entry
120473934 CDS
T08155
Symbol
sin3b
Name
(RefSeq) paired amphipathic helix protein Sin3b
KO
K23213
paired amphipathic helix protein Sin3b
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pprm03036
]
120473934 (sin3b)
Chromosome and associated proteins [BR:
pprm03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
120473934 (sin3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
HHD_RTEL1
PAH_ZNF598
At4g15545_C
mTOR_dom
UL21a
Motif
Other DBs
NCBI-GeneID:
120473934
NCBI-ProteinID:
XP_039519937
LinkDB
All DBs
Position
Unknown
AA seq
1200 aa
AA seq
DB search
MAKIQAHSSTAKQINQIQDKAYVVQKQVQQQHFQKLKVEDALSYLDQVKIRFGNDPGIYN
KFLDIMKEFKSQSIDTPGVINRVSQLFHGHPDLVLGFNAFLPPGYRIEIPKNGMAFLQSP
FPSQVSPGPGRSTGSPVVSASSSAVAEAGSAQNEAVTSPESIASSSGPPEQSSRLSLPLP
SRDSQSQPSATTSVSPPTSEPSPVEFDSAISYVNKIKNRFLDNPETYRSFLEILHTYQKE
QLEVKESRGRSTGGMTEDEVFSKVASLFKGQEDLLAEFGQFLPDAKRSLFTGGSLTGKDH
LKRAEEEEINKQSKKRPRPMLMPHMTPLLKKKMKYSCSKDPSFAAVGKHGVLREFTFFDK
VRRLLKSQEVYENFLRCIALFNQEVVSGAELLQLVTPFLGKFPELYTQFKSFLGDKELSH
ALSGLSDRYMEAGGREVDYASCKRLGSSYRALPKTYQQPKCTGRTAICKEVLNDTWVSFP
SWSEDSTFVSSKKTPYEEQLHRCEDERFELDVVLETNLATIRVLESVQKKLSRLSPEDQE
RFRLDDCLGGTSEVIQRRAVYRIYGDKAPEIIEGLKRSPATAVPVVLKRLKAKEEEWREA
QQGFNKIWREQYEKAYLKSLDHQGVNFKQNDMKALRSKSLLNEIESIYDERQEQSTEEGG
VGQQGRDGSGTGLTSEPHMIFTHEDKQILEDAASLIIYHVKRQPTIHKDDKDHIKRIIQH
FVPDLFFARRGELSETEEFTDEEAEGEDAAAGGGVSASGGQQQLNGDSRRRRCTSPQSMD
TSMASHSMNPEGEVVDLRDPEAEHQKELDGVYNLFFVNNNWYFFLRLHQTLCSRLLKVYR
QAERQLLEHRAEQNRERLLMGEGRREKANDLAMELRLKQPSEVELEEYYPAFLDMVRSLL
DGNLESTQYEDTLREMFTIHAYIGFTVDKLIQNIVRQLQHLVSDEVCLQVTELYLSERKR
GAAGGNLSSQCVRAAWEASYQWKAERVMAEENCFKVMFIQNKGQVTLTIELLDTEEAQGD
DPLDVQSLSNYMEQYIGTESVCSQAEGYYFKPVFLPRNLRHFRGWQLKQVEAMRCRREWH
RKMGVETAGNLDCRFKLNTHKMVFVMNSEDYMYRRGALVKARRSQHRVARTQHERFEQWH
RGWLSDNVSPAAERSVQDWLMGEEDEDMIPCKTTCVSVQVKGLQVNRYQVHYNSKAPASP
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaattcaggctcacagcagcactgcgaagcaaatcaaccagatccaagacaag
gcctatgtggttcagaagcaggtccagcagcagcactttcagaaactaaaggtggaggat
gccttatcttacttggaccaagtcaaaatacggtttggaaatgatccgggaatatacaat
aagtttctggatatcatgaaagaatttaagtctcaaagcattgacacaccaggcgttatc
aacagagtttctcagctcttccatggacaccctgaccttgtcctgggttttaatgccttt
ttacctcctggctatcggatcgaaattcccaaaaatggaatggcatttcttcagtccccg
tttccctcacaggtctctccaggaccaggacggagcaccggcagccctgtggttagcgcc
tcttcgtcagcagtggctgaggcagggtctgctcagaatgaagctgtgacctctcctgag
agcatcgcttcatcatctggacctcctgaacaatcaagcaggttgtcacttcctctgccc
agccgagacagccaatcacagccgtcagccaccacgtcagtgtcccctcccacatcagag
cctagtcctgtggagtttgacagcgccatcagttacgtcaataagatcaaaaaccgtttt
ttggacaacccagaaacctaccggtcctttttagaaattctacatacataccagaaagaa
cagctggaggtgaaggagagcagaggccgtagcactggaggaatgaccgaagatgaggtt
ttctctaaagtggcaagccttttcaaaggtcaagaggatctacttgcggagtttggccag
tttttgcctgatgcaaagagatctctgttcactggaggttctttgactggcaaagaccat
ttgaagagagcagaggaagaggaaataaataaacaaagcaagaagagacctagacccatg
ctgatgccccacatgaccccgcttctgaagaaaaaaatgaagtattcatgttccaaggac
ccgtcttttgctgctgtaggaaaacatggagtcctgcgggaattcacgttctttgacaag
gttcgtcgcctgctaaagagtcaggaggtgtatgagaatttcttgcgctgcatagccctg
ttcaatcaggaagtagtttcaggggccgaactccttcagcttgtgactccattcttgggg
aagtttccagaactgtatacccaatttaagtcatttttgggtgataaagagctgtctcat
gccctctcgggcctctccgaccgctatatggaggctggaggcagagaagtggattacgcc
tcctgcaaacgcctgggttccagctacagagccctgcccaagacctaccagcagcccaaa
tgcactggccgaactgctatatgcaaagaggtgctgaatgacacctgggtctcattccct
tcctggtctgaagactctacttttgtgagttccaagaaaacaccatatgaagagcaactt
catcgctgtgaggatgagagatttgagctggatgttgtgcttgagactaatttggcaacg
ataagagttttggaaagcgtgcagaagaagctatcacgcctttcgcctgaggatcaagag
cgtttccgattggacgactgcctaggtggaacttctgaagtcatacagcgccgtgcagtc
tatcgtatatatggcgacaaggctccagagatcattgaggggttgaagaggagtccagcc
actgcagttcctgttgtacttaaaaggttgaaagctaaagaggaggagtggagggaggct
cagcagggtttcaacaaaatctggagagagcaatacgagaaggcatatctgaaatcactg
gaccaccagggtgtcaacttcaaacagaacgacatgaaggccctccgatccaagagtctt
ctcaatgaaatagagagcatctatgatgagcggcaggagcagagcacagaagagggcggc
gttggccagcaaggtcgtgacggctcgggcacaggtttgaccagcgagccccacatgatc
ttcactcatgaagacaaacagatccttgaggacgccgcctccctcatcatctaccacgtc
aagcggcagcccaccatccacaaggatgacaaggaccacatcaagcgcatcatccagcac
tttgttcctgacctcttttttgcccgacgtggagagcttagcgagactgaggagtttacg
gacgaggaggcggagggcgaggatgccgccgcaggaggcggagtctcagcgtcaggcggc
caacaacagttgaacggcgattccagacgaagacgatgcacttcccctcagagcatggac
acctctatggcctcccacagcatgaatccagagggagaggtggtggatctgcgagaccca
gaagctgagcaccagaaggagctggatggagtctacaacctgttcttcgtcaataataac
tggtacttcttcctgaggctgcaccagaccctctgctcacggctgctgaaggtttaccgg
caagccgagagacagttactggaacacagggcggagcagaatcgggaacggctgctcatg
ggagaggggcgcagagaaaaggccaatgacctggccatggagctgcgtctaaaacagcca
agtgaggtggagttagaggaatattacccagcattcttagacatggtacgcagtctactg
gatggaaacctggagtccacgcagtatgaggacaccctgagagagatgttcaccatccac
gcttacatcggcttcaccgttgacaagctcattcagaatatcgtaagacagcttcaacat
ctggtcagtgatgaggtgtgtctgcaagtcactgagctgtacctgtccgagaggaagagg
ggggccgccggtgggaatctctcgtcccagtgtgtccgtgccgcttgggaagccagttac
caatggaaggcagagagagtcatggctgaagagaactgcttcaaggtcatgttcattcaa
aacaaaggtcaggtcaccttaactattgagctgctggacacagaggaggcccagggtgat
gaccctctcgatgttcagagcctgtctaattacatggagcagtatatagggacagagtct
gtgtgctctcaggcagaaggctactacttcaagcctgtgtttctacccaggaatctgaga
catttccgcggctggcagctcaagcaggtggaagccatgcgctgccggagagagtggcat
cggaagatgggtgtggagacagccgggaacctggactgccgtttcaaactcaacacccac
aagatggtgttcgtgatgaactccgaagactacatgtaccgccgaggagcgctggtgaag
gctcggagatcccagcacagagtagcacggactcaacacgagcgctttgaacagtggcac
cggggctggttgagcgataacgtgtcccccgccgccgagcgcagcgtgcaggactggctc
atgggagaagaagatgaggacatgatcccctgcaagaccacctgcgtgtccgtgcaggtc
aaaggcttgcaagtcaacaggtaccaggtgcactacaacagcaaggcccccgcctcaccg
taa
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