Pimephales promelas (fathead minnow): 120474012
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Entry
120474012 CDS
T08155
Name
(RefSeq) F-actin-uncapping protein LRRC16A
KO
K20493
leucine-rich repeat-containing protein 16
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprm04131
]
120474012
Membrane trafficking [BR:
pprm04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
120474012
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
LRR_1
LRR_4
LRR_8
Motif
Other DBs
NCBI-GeneID:
120474012
NCBI-ProteinID:
XP_039520058
LinkDB
All DBs
Position
Unknown
AA seq
1340 aa
AA seq
DB search
MSGEESGVPRDLLESVQEAIGQQVKLCLVQKVNLEVKGDKLDSRILALAPHRVFLLSARV
PAKVDQSFSVFDIQSINSVKQKQLLVDYDRGQLSLRLASDRDTDDFIAQIGTNIQEICPG
LDPLRVIKKLVLKPVERITSLQTLWENPIPAEAGPCGGFSRLYWCVCDQMGVPYRDEVQW
DVDTIYLSQDTRELCLQDFIHLDNRDLLAITAALEFNQWFIKLSIKDFKLTADLCDQIFR
VVSRSTRLEELTLDNTGLKSDFAQRFAAALSHNPNSALKAVSLPNNCIEDKGVMFLSPAL
SKLTPGLKHLDLSKNSLSSKGVNILAQCFCSTSLTHLNLSGNTLRGEDMPHLWSFLSQPN
RLHTLDLSNSESSLDLVCSSLQRGSLKHLTVLNMSRSVFSLKRGKEFPSSFKQFFSSASS
LQNICLSGTKLPSEGLKALLLGLACNPNLRDVALDISGCELRSAGAQILEGCIAEIPNIT
SLDVSDNGLDSDMSTLLEWLGKNRSIKHLSIGRNFSNIKTKNLGQVLVSVVQMIQEEDSP
LASLSLADSRLKADLSLVLNALGGNTSLTHLDISGNNMGDFGAKMLAKALQVNTKLRTLI
WDRNSVSAQGLQDMASALEKNYTIRFMPVPITDAAQALKNSPEKTEDALLKMEQYLLRNH
ESRRYLQDQAFRLQQGLVTSTTRQMMAQVCVQVQDHLNSLRFSKSDRVQQDMKTAESLMT
DAKNSTTLLRSLYDQRSSVGISDGSAGVCVQQVQEKLCSVAGEISILLDQQLQGLLVSML
DTAQSVCPHVMQQACLRENLLHASEGRTSVSKAFITSTLLEHSAFDIINKISEVKLSMAS
CLSEYITDEILRSLSRSQHTLAGHLSRRGQQLLHQDSQETEVLDEKEIQTNNLVPAEPEP
EPQRTHKAKRKSIHSRMFRPMSSAFELDFDLCKALEDVSLCVDDLPPPPTPPPPQPESPP
PVEVELPQPQPMSFSNLPTGDTPPLQHATKFRPRRTKKAKPSRAAVRRQNTLGESQRCQP
ISTAPVQEVDQSSSVDEGVPEFYSRKVTNIVAKAPAADTEKSRDSRLSGFFSLIKHRSST
KATPTSPTPGAMATTETITTVSVTTAEKDAPPLEPVVIPEPVAHEVKGHMQEGVKRGSPL
MGRHMAVQVLGNDLLLAEIRAKQEKRKKAGVSPSATSKPEAPDEGGDHGHTTPAVQKEAQ
DESAARKLKHTPQHTHTPEHKHTAEHTPPSEHHSSRPSVSFSTSDCIIPPHLDDVPESPV
LPTLSVTEGAEPGPVTHSTEGGASSAPPPESPVFDTHTSHTPSVGRSISCVQSRTDPEEG
DTERQRTKSLPSAAPANHTA
NT seq
4023 nt
NT seq
+upstream
nt +downstream
nt
atgagcggggaagagtctggcgttcctcgggatctgctggagagcgttcaggaggccatc
gggcagcaggtcaagctgtgtttggttcagaaggtcaacctggaggtcaaaggtgacaaa
ctggacagcagaatcctggctctcgctcctcatcgagtgtttctgctcagcgcacgagtg
cctgctaaagtcgatcagtccttcagtgtgttcgacattcagagcatcaacagtgtcaaa
cagaagcagctgctggtggactatgacagaggacagctgtctctgagactggcgtctgat
cgagacactgatgattttattgcacaaataggaacaaacattcaggagatttgtccagga
ctcgacccgctgagggtgataaagaaacttgtgttaaagccggtggagagaatcaccagt
ttacagacactgtgggaaaaccccatcccagcagaagccggaccctgcggcggtttctcg
cgtctctactggtgtgtgtgtgatcagatgggcgtcccctacagagacgaggttcagtgg
gacgtggacaccatctatctgtctcaggacacacgggagctctgcctgcaggacttcatc
cacctggacaacagggatctgctggccatcaccgctgctctggagttcaatcagtggttc
atcaaactctccataaaggactttaaactgacagcagatctgtgtgatcagatattcaga
gttgtgtctcgatctaccagactggaggaactcactctggacaacaccggactcaagagt
gattttgctcagaggtttgctgctgcgttgagtcacaatccaaactcagcgttaaaggca
gtcagtctgcccaacaactgtattgaagacaaaggtgtcatgtttctgagccctgccctg
tctaaactcacacctggactgaaacacctggacctgtccaagaactcactgtcatctaaa
ggtgtgaatattctggctcagtgtttctgctccacatcactcacacacctgaatctgtct
ggaaacacactaagaggggaggacatgcctcatctgtggagtttcctgtctcaacccaac
cgtctgcacacactcgacctgtcgaacagcgaatcttccctcgacctggtgtgttcgtca
ctgcagcgtggctctctcaaacacctgacagttctcaacatgtccagaagtgtcttcagt
ctcaagagagggaaggagtttccgtcctccttcaagcagttcttcagcagcgcttcgtcc
ctccagaacatctgcctctctggaaccaaactcccttctgaaggactcaaagctctgctg
cttggtctggcctgtaaccctaacctgagagatgtagctctggacatcagtggctgtgag
ttgcggtcagcgggcgctcagattctggagggctgcatcgctgagatcccaaacatcacc
agcctggacgtgtctgacaacgggctggactcagatatgtctacgctgctcgagtggctc
gggaagaaccgctccatcaaacacttgtccatcggcaggaacttcagcaacatcaaaacc
aagaatctcgggcaggttctggtctccgtggtccaaatgattcaggaagaggattcacca
ctggcgtctctgtctctggccgactcacgtctgaaggccgatctgtcgctggttctgaac
gctctgggcgggaacaccagtctgacacacctggacatcagcgggaacaacatgggagac
ttcggggccaagatgctggccaaagctctgcaggtcaacaccaaactcaggacgttgatc
tgggaccgaaactctgtcagcgctcagggactacaggacatggcttctgctctggaaaag
aattacaccatcaggttcatgccggttcccatcacagacgcggctcaagctctgaagaac
agtccggagaaaactgaagacgcccttctgaagatggagcagtatctgctgcgtaaccac
gagagcaggcgatatctgcaggatcaggcgttccggctgcagcagggcctcgtcaccagc
acaacacgacagatgatggcgcaggtgtgtgtgcaggtccaggatcatttgaactctctt
cgctttagtaagagtgacagagttcagcaggacatgaagacggccgagagcctgatgacg
gacgccaagaactccacaacacttctgcgcagtctgtatgaccagcgctcatcggtgggc
atcagtgacgggtcagcgggagtgtgtgtccagcaggtgcaggagaagctgtgttcagtg
gctggagagatcagcatactcctagaccagcagctgcagggtttgctggtgtcgatgttg
gacacggctcagagtgtgtgtcctcacgtcatgcagcaggcgtgtttgcgtgagaatctg
ctccacgccagtgaagggaggacgagtgtgtcgaaggccttcatcacctccaccctgctg
gagcactcggccttcgacatcatcaacaagatcagtgaggtgaagctcagtatggcgtcg
tgtctctctgaatacatcactgatgagatcttgcggtcactttctcgctctcaacacaca
ctggcgggtcatctgagcaggagaggtcagcagctgctgcatcaggactcacaggagaca
gaagttctagacgagaaggaaatacagacaaacaacctggtaccagcagaaccagaacca
gaaccacagcggacacataaagccaagaggaagagcattcacagcaggatgttcagaccc
atgtcctccgccttcgagctggactttgatctgtgcaaggcattagaggacgtgtctctc
tgtgtggacgatctgccgccgcccccgactccgccccctccacagccagagtccccgccc
ccagtggaggtggagctaccacagcctcagcctatgagcttcagcaacctgcccaccgga
gacacgccccctctccagcacgccaccaagttcaggccgcggcggaccaagaaggccaaa
cccagcagagccgccgtaagacgccagaacacacttggagagtcgcagcgctgtcagcca
atcagcaccgcccctgtgcaggaagtggatcagagcagctctgtggatgaaggcgtgccg
gagttctactccagaaaggtcaccaacatcgtagccaaagcgcctgccgcggacacagag
aagagcagagactcgcgactgagcggcttcttcagcctcatcaagcatcgctcctccacc
aaagccacacccaccagccccacccctggtgccatggcaaccaccgaaacgatcacaacg
gtctccgtgacaactgcggaaaaagatgccccgcccctagagccggtcgtgatcccggag
cctgttgcgcatgaggtcaaaggtcacatgcaggaaggtgtcaagcggggcagtccgctg
atggggcgtcacatggccgtgcaggtgctcggcaacgacctgctgctggcggagatacga
gccaaacaagagaagcgcaagaaggcaggtgtgtctccatctgcaacatccaaacctgaa
gctcccgatgaaggtggagatcacggacacacgacaccagcggtccagaaagaggctcaa
gacgaatctgcagccagaaaactcaaacacacacctcaacacactcacacacctgaacac
aaacacacagctgaacacacaccaccatcagagcaccactccagccgtccttccgtgtcg
ttcagcacctcggactgcatcattcctcctcatctggatgatgtcccagaatcccctgtt
ctgcccacactgtcagtcaccgagggggcggagccgggtcctgtcactcacagcacagag
ggaggagcctcatctgccccccctcctgagtctcctgtgttcgacacacacacctcacac
acaccgagtgtcggccgctccatctcctgcgttcagtcccggaccgacccagaggagggc
gacaccgagcgccagcgcaccaagtccctcccctcggccgctccggccaatcacaccgcg
tga
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