Pimephales promelas (fathead minnow): 120474031
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Entry
120474031 CDS
T08155
Symbol
pus7
Name
(RefSeq) pseudouridylate synthase 7 homolog isoform X1
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pprm03016
]
120474031 (pus7)
Enzymes [BR:
pprm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
120474031 (pus7)
Transfer RNA biogenesis [BR:
pprm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
120474031 (pus7)
Prokaryotic type
120474031 (pus7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruD
PUS7L_N
Motif
Other DBs
NCBI-GeneID:
120474031
NCBI-ProteinID:
XP_039520097
LinkDB
All DBs
Position
Unknown
AA seq
704 aa
AA seq
DB search
MKHVCVCFAAVRLVFIYTLSKIIRSSAQNLRFLKRFKRSSYIRGISFSATHSSKIISVPM
DEPESTLVSVPVVTGEKRPFPEADPDPAAKRVRVEEEEKESRGREEEEEHQDEEEEPCDE
EEEEESFADMMKHGLSEADVGIHKFISEHTGFSGILKERYSDFVVHEIGKDGKMVRLDDL
CVPADVEEPSPDLRLAECQTLTEEQKEKLTELQLFKNKEGTVAIEVQEDSKEKRTLLHRS
VKLLFPGLETKTEEREGKKFIVAYHAAGQRALAAPRKHSWPKNRGSFCHFVLYKENKDTM
EAINLLSKFLRVRPNMFSYMGTKDKRAITVQEIAVLKISAERLSHLNKCLMNMKLGNFSY
KKHPLKLGELQGNHFTVVLRNISGSLEQVEQAMTSLRETGFINYYGMQRFGTTAVPTHRV
GRAILQNNWKEVMDLILKPRPGAEKGYLVKCRQEWALTHDPEAALKKLPVKRCVEGQFLR
GLVKYGKNNIVTAFGLIPRNNRLMYIHSYQSYVWNSMVSRRVEAYGLRAVEGDLILRGGS
AHVLSADDAEKHSIHDVVMPLPGFDVIYPTHSVGRGYGEMLSADDLDIQNMRHKVRDYSL
AGAYRKLLIRPSDVSWELIQYDDPRVPLVLSDVEKLENAPAPVYLKRREVSGSEDGVFSA
VLHLRHDGRQRSAEDGHQHQESDSAQHQLAELTLTHTHTHSWLN
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgaaacacgtgtgtgtatgttttgcggcagttcgtctcgtgttcatatacacactcagt
aagatcatcagatccagtgctcagaatctgcggtttctgaagaggtttaagcgcagttct
tacatcagaggaatcagctttagcgccacacactcctcgaagatcatctctgtgccgatg
gacgagcctgaatccacactggtctcggttcccgttgtgaccggggagaaacgacccttc
cctgaagcggatccggatccggctgccaagagagtcagagtcgaggaagaggagaaggag
agcagaggaagagaagaggaggaagagcatcaggatgaggaagaggagccgtgtgatgaa
gaggaggaggaggagagtttcgctgatatgatgaagcacggtctcagtgaggcagacgtg
gggattcacaagttcatcagcgaacacaccggcttctctggcatcctgaaggagaggtat
tccgacttcgttgtccatgagatcgggaaagacgggaagatggttcgcttggatgatctg
tgtgttcctgcagatgtcgaggaaccctctccggatctccgtttggccgagtgtcagact
cttacagaagagcagaaggagaagctgacggagctccagctcttcaagaacaaagaggga
accgtggccattgaggtgcaggaggactcgaaggagaagcgcactctcctgcacagatct
gtgaagctgctgtttcccggcctggagaccaagactgaggagcgggagggcaagaagttc
atcgtggcatatcatgcagcgggtcagagagcgctggcagcccctcgaaaacattcgtgg
ccgaagaaccgcggcagtttctgccattttgttctctacaaggagaacaaggacaccatg
gaggccatcaacctcctctccaagttcctcagggtcaggcccaacatgttctcctacatg
ggcaccaaagacaagagggccatcacggtgcaggagatcgccgtgctgaaaatcagcgct
gagagattatctcacctcaacaaatgcctcatgaacatgaagctgggaaacttcagctac
aagaaacacccattaaaactgggagagctgcagggaaaccacttcacggtggtgctcagg
aatatctccggctctctggagcaggtcgagcaggccatgacatctctcagagaaaccggc
ttcattaattactacggcatgcagcgcttcgggaccacagctgttcccacacaccgggtc
ggcagggctatactgcagaacaactggaaggaagtgatggatctgatcctgaagcctcga
cctggagcggagaagggttatctggtgaagtgccggcaggagtgggctctcacacacgac
ccggaggcagccctgaagaagctgccggtcaagcgctgtgtcgagggccaattcctgcga
ggcctcgtcaaatacggcaagaacaatatcgtcacagccttcggactgatccctcgcaac
aacaggctgatgtacatccacagttaccagagttacgtgtggaactctatggtcagcaga
cgtgtggaggcctatgggctgagagctgtggagggagatctgatcctcagaggaggctct
gctcatgttctgtcagctgacgacgcagagaaacactctattcatgatgtcgtgatgcca
ctgcctggattcgacgtgatctaccccactcacagtgtgggtcgaggatacggagaaatg
ctgagcgctgacgatctggacatccagaacatgaggcacaaagttcgtgattattctctg
gccggcgcgtaccgtaaactcctcattcgccccagtgacgtcagctgggagctgattcag
tacgatgatccacgagtgcctctcgttctctcagatgtggagaaactagaaaacgctcca
gctccagtctacctcaaaagaagggaagtatcgggctctgaagatggagttttctctgcc
gtcctccacttacgccacgatggccgtcagagaagtgctgaagatggacaccagcatcaa
gagtcagactcggctcaacaccagctggctgaactgacactcacacacacacacacacac
agctggctgaactga
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