Pimephales promelas (fathead minnow): 120474228
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Entry
120474228 CDS
T08155
Symbol
rab11fip1b
Name
(RefSeq) LOW QUALITY PROTEIN: titin homolog
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120474228 (rab11fip1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprm04131
]
120474228 (rab11fip1b)
Membrane trafficking [BR:
pprm04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
120474228 (rab11fip1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2
RBD-FIP
Motif
Other DBs
NCBI-GeneID:
120474228
NCBI-ProteinID:
XP_039520300
LinkDB
All DBs
Position
Unknown
AA seq
1338 aa
AA seq
DB search
MSLAEQSQHXYPTSVQVTVLQARGCGSRGKNGTNDAYAIMQVAKDKFSTSVAEKSVAPVW
KEEAAFDLPLFHPSNAERCTLQVCVMHRALMGPDKTLGQATVNLLELQDNKSRNKSEWFK
LMGKTGKADKDRGEVLLDIQFMRNNMTASMYDLSGQDKSRSRLGKFKDKLKGKKKDGMSD
SASAIVPSFGQVLTDSEGEEEPDVTPGAKKKNKLKSLFAPKPGLHRNMSQSMSTLATLPE
KDSAISLSRSSGLNVESPEGKKKFKFLKHKRTGSSDSKVSQGTGSLERGTVQGNVCINGS
HVYTKAQENRAGSTFSLNSSGHGSMEDLRRGHDQKTSVDSDLQTQENSVKEINIKQEEQR
KREAEVRERLDDAEKDERKWIEREQEKKRLDEEVGKRLEREEEKRKLEKQVEERKRIERE
EERKRIEREEERKRMEREEEKRKLEKQVEESKRIEREEERKRMEREEERKRMEREEEKRK
LERQEEGRKKIERDEERKRIEREEEQKRMEKEEEKRKLEKKEAERKRTEKEEMERKRIEQ
DEMTRIKEQERIRQEEEKRVVEEERIKEEKRKRTEKEEKIRKEEEKRRKMEEEERTRLEN
ENLRKKGETEKIEMERRAEDEERRRKEKEKVEAEEKRKREEERRMTEETKAQERLRLEKE
KVEFEKKKIEERMRGEQVRKMAEEEEKRKLKEKADQEKIEQEKEEMERQGKTKEQRPEVK
PRSARLNTSKKAPDEINSDYTPSTNPFEDLLSVDESFNPFEHATVPQPEALSRSTKVSAV
KPSSSVSGNFFSQASVPNTNPFLDDSDAISRNRESIISPRNVTERSEKKRRAPMPPQNTA
QNEKPDIPSKAPAIPQATQSCQSRASEEGGDSDSCSLRQDKRPAPLRPDVSKNRQEMQNE
HADQSTTTLNIGEWRTPRFQEEDQINQGRPVSQDESRTFDADNFRNPSLSHLSLSPFSNR
QETNPFISTEVKVNKQNKGLAPKPLLQSTSCKNSASEPEPNNLAIGNVYLTEHSVSLEDR
ATSNSCIDQLDESSTQFTGKLVSEEPSTKPESDLSSRESRQENLPAKCKLDFLEGDITLR
SEPTLGTVLCHIENVLPDIGVSKKSRAPLPPANSAATGNQNSSQQPEAVLKSTSQPTRPD
QDKSLTINSSMSTSCLTLSHGKSSLILNQDLKKNEVQTKNEHSPLRVEAGQGSGHRSLPQ
ARVSPIDVKSIIVQNNGSEHERTGDTAAFKPCRPHAVKPLSTTDNHPDLRETQDSSRSAT
ITDEIQVKMKAPEAKGRGPYSQLTNEELINLLEKQKVQLSQKDSKIGELELYIDNLLVRV
MEKNPEILMSLTSMKKSV
NT seq
4017 nt
NT seq
+upstream
nt +downstream
nt
atgtctctggcagagcaaagccagcatnggtatcccaccagcgtccaggtaacggtgctc
caggcgcggggttgcggatcaaggggaaagaatggcaccaacgacgcgtacgccatcatg
caggtggcaaaggataagttctccacctcggtggccgagaagagcgtcgcgccggtgtgg
aaggaggaggccgcgttcgacctgccgctctttcaccctagtaacgcggagcgctgcacc
ctacaggtgtgtgtgatgcaccgggctctgatgggtcccgataaaacactcggtcaggcg
accgtcaacctcctggagctccaggacaataaatcccgtaataaatcagaatggtttaaa
ttgatgggaaagactgggaaagctgacaaagaccggggtgaggtgctcctagatattcag
ttcatgaggaacaacatgacagccagcatgtacgacctctccgggcaggacaagtcacgc
tcacggcttggaaagtttaaggataagcttaaagggaaaaagaaagatgggatgtcagat
tctgcttccgctattgtgccttcatttggacaggtactgactgacagcgagggtgaggaa
gaacctgacgtcacacctggagccaaaaagaagaataaactgaagtctctctttgcaccc
aagccgggtttgcaccgtaacatgtcacagtccatgtccacgctcgccaccctgcctgaa
aaagactcagccatcagtctgagcaggtcgtctggcctaaatgtagagtctcctgaaggc
aaaaagaaatttaaatttctgaagcacaagcggactggaagctctgacagcaaggtttcc
caaggtaccggctctcttgaaaggggcacggtgcagggcaatgtgtgcatcaatggcagt
cacgtctacacgaaagcgcaagagaacagagctggctccaccttcagcctgaacagctca
ggccatgggtccatggaagacctgcgcagaggtcatgaccagaaaacctcagtggactct
gacctgcaaactcaagagaattcagtgaaagagataaacataaaacaagaggaacagagg
aaacgggaagcggaagtcagggaacgactagatgatgctgaaaaggatgagaggaaatgg
attgagagagaacaggaaaaaaagagattagatgaggaggtggggaaacggttggaaagg
gaggaagagaagaggaagctggagaaacaggtagaggagaggaaaagaattgagcgagag
gaagagagaaagaggatagagagggaagaggagcggaaacggatggagagggaggaagag
aagaggaagctagagaaacaggtagaggagagcaaaaggattgagcgagaggaagagaga
aagaggatggagagggaagaggagcgtaaacggatggagagggaggaagagaagaggaag
ctagagagacaggaagaggggagaaaaaagattgagagagatgaagagagaaagaggata
gagagggaagaggagcagaaaaggatggagaaggaggaagagaagaggaagctagagaaa
aaggaagcggaaagaaaaaggactgagaaagaggagatggaaaggaaaaggattgagcag
gatgaaatgaccagaataaaggaacaggaaagaattagacaggaagaggaaaaaagagtg
gttgaggaggagaggatcaaagaggagaaaaggaagagaacggagaaagaggaaaagata
aggaaggaagaagaaaaacggagaaaaatggaggaagaggagagaacaagacttgagaat
gaaaatctgcgaaaaaaaggagagaccgaaaagattgagatggaaagacgcgctgaagac
gaggaaagacggcggaaggaaaaagaaaaggtggaagcagaggaaaagaggaaaagggaa
gaggagagaagaatgaccgaggaaacgaaagctcaagaaaggttacggctggaaaaagag
aaggtggagtttgagaaaaagaaaattgaagaaaggatgagaggagaacaggtgagaaaa
atggctgaagaagaggagaagaggaagctgaaagagaaagcggaccaggagaaaatcgag
caagagaaagaagaaatggagagacaggggaaaacaaaagaacagcggcccgaggtgaaa
cccagaagtgctcgactgaatacaagtaaaaaagcacctgacgagattaactcagactac
accccatccaccaatccctttgaagaccttctctcagtagacgagagcttcaatcccttc
gagcatgccaccgttcctcaacctgaagctctcagtcgctcaaccaaagtgtctgctgtc
aagccaagttcttctgtttctggaaacttcttttcacaagcatctgtgccaaacaccaac
ccattcttagatgattctgatgccattagccgaaaccgagagagcattatcagtccccga
aacgtcacagaaagatcagagaagaaacgacgtgccccgatgcctcctcagaacactgcg
cagaacgaaaaaccagacatcccctcaaaagcaccagcaattcctcaagccacacaaagt
tgtcaatctagagcatctgaggaaggtggagactctgattcctgcagtttacgacaagat
aaacgtcccgcacctttacgaccagatgtttcaaagaacagacaagaaatgcaaaacgaa
catgctgaccaatctacgacgactcttaatattggagaatggagaactcctaggttccag
gaagaagaccagattaaccaagggcgcccagtctcgcaggatgagtcgaggacatttgac
gcagacaattttaggaaccccagtttatcacatttaagcctgagtcctttcagtaacaga
caagaaaccaacccttttatatctaccgaggtcaaagtaaataaacaaaacaagggtcta
gctccaaagcctttattacagtcaacgtcatgcaagaattctgcatctgaacctgaaccc
aacaaccttgccattggtaacgtctatttgactgaacattctgtatcccttgaagacaga
gctacttcaaactcttgcattgatcaactagatgagtcttcaacccagtttactggaaag
cttgtatctgaagagccttctaccaaacctgagtctgacctttcttcaagagaaagtaga
caagagaatttgccagcaaagtgtaaactagactttcttgaaggagacattactttaagg
tctgagccaacccttggaacagttctttgccatattgaaaatgtcctgcctgatattggt
gtttccaaaaagagtcgggccccgttgcctcctgccaattcagcagcaactggcaaccag
aactcaagccagcaaccagaagctgtactgaagtcaaccagtcaacccaccagaccggat
caagacaagtcgttaactattaatagtagcatgtcaacctcatgtttaaccctgtcccat
ggaaagtcttctctaatcttgaatcaagatctcaagaaaaatgaagtgcagactaaaaat
gaacattctcctctgagagtggaagcaggccaagggtcagggcaccggtctctgccacag
gccagagtttcaccgattgatgttaagtccatcattgtgcagaataatggaagtgaacat
gagagaacaggtgatactgctgccttcaaaccctgcaggccacatgcagtgaaacccttg
agcaccactgacaatcatccagacctcagagagacccaagacagttccagatctgctaca
attacagatgaaatacaagtcaagatgaaggccccagaggctaaagggagagggccctac
tcccagttaaccaatgaagaactcataaacttgttggaaaagcagaaggtgcagctttca
caaaaggactctaagataggggaattggagctgtatatagacaatcttctagtccgtgtc
atggagaagaatcctgaaatcttaatgtccttgacttcgatgaagaaatctgtttga
DBGET
integrated database retrieval system
