Pimephales promelas (fathead minnow): 120474359
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Entry
120474359 CDS
T08155
Symbol
sh3tc2
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 2 isoform X1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprm04131
]
120474359 (sh3tc2)
Membrane trafficking [BR:
pprm04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
120474359 (sh3tc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_1
TPR_2
TPR_8
TPR_7
TPR_MalT
TPR_10
HEAT_Nup120
SH3_2
TPR_NPHP3
TPR_14
TPR_11
ChAPs
Motif
Other DBs
NCBI-GeneID:
120474359
NCBI-ProteinID:
XP_039520485
LinkDB
All DBs
Position
Unknown
AA seq
1494 aa
AA seq
DB search
MSSRESEVYPQEENGQEERERVTPSIITGSTVERALLNPCLKLAVYIMACCRCCPIPCLK
NCFSFSAISPAELDALWNDPPYSLAAVSELFPPNDVMTADEEVEDEAEVEAEGRSREIYW
KRKETFSGSSTVSSAGERFSPDVVLLFSGRRRSSVSPDSELQEALRTRLRVVESNSQDVV
QLFKDLSARLVSVHAEKDSFIITFKTVEEIWKFSTYLALGYVARCLENFLCDQSFWLDPA
LLSDVEICVTVDEDHLATLYLGLLLQEGTFFSKTLYNSDCKEEEEELTLTYRRNDLVMVK
DIGQEAMWEGTLLSTGQHGLVPVHEMQPLPYPFYQWFLKKYPGNAGGIPVTEGLFDHPVV
VGTCVAVVDHYPMGKDELHLCQGDIIKIEGFLLNTLNMFIGKHLTSGEIGFVHKAHVKPE
SIEPLDGQLVFLSKEERAALSKLNPCLEPCQSDVLANLFSTDISTVYRLDRLDDSDFTYI
RNHPMSAEQKTTVDQRKSTISEKSDVTPYHSSPRQSLYASRNHLDRDSEILSFSLEDTFR
EMDEYEEDPPNFMDECIWEADEAERCDPILTLLNLEHFQDTLQTLYDLSYSFLDTFFNCL
PEDEVLQHLENLREGAKKGRMLWAHRRVCFLLGRLCAKKLKFSQARVYFEEALKVPVKGF
DDKPLLIALYTNLTAVYLKQKMMDKLPSTLDKASALILCLPCHNFCSVDEFELLKPIMRK
AIIEKDKYLEARTCYLSLCLFIRLRKIEDALPFVERLQFLSMTLSAEVGRPTAPIDLNWM
LCRLYHKKYLPYLTLASLSLDSGQEHSLDDAFQKIELFIRNSARLNPHWKESNSVLPTQV
VVYLQQALSIASQGEDPRTQRDLCLCLASVYQQHGALEKAVPFAQQAAQTGSQINEEEGF
EASILLAWLLVLTEEPVQAQNTLHPLLKSLNETDSPTQLGVVYNLLALCLRKQGRVQEAA
RNVYCALQISRENGNKRNEALALANLGCLSLSLGASGLAECFLLSSLHLFQFLSESPTDQ
EHVQALLWLGRSYKDRGGSQEVRICFEMGLLIAISAKNLHSQMVVAKVLSRHYADLLLYG
QCIVYYEHCVGLCRTLKNKQLEGEFLELLSNLYLSLNTEKSSRKSLDYSKQSLRISIDLG
KRLEESETWLQVGRIYYLIHEDELADMYLQAAVKTALRMNDPCFAMSIYEEAGDVFFKGH
RNQLAALPFYRDGSLPFARSIKDVDSEFRLLNKLTELLMKQKHYEEALQYATLAVQVSTA
TDVTLNERVSFHRLASVYFSLGKYEMAENYYLKSLSLCPTAFEHDIELRYYVKVYCRLAD
LTLYRLKDAFDAIGYYHLALAAALEDKESLSTLYIIYMKLAEIHANYMPDAELCMNYMDR
AQSLRRELAGDTEETHQDLVETASDNQTNAGRSDSSSGTSTLTESSMTDTGHTIDALKES
ELIFSNLSHKEVTGTNISEETDLGPADNINPETTCPDKNHIHERRMKEGLTIML
NT seq
4485 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtagagagagtgaggtttatccacaagaggaaaatggacaggaagagagagag
agagtgactccatcgataataactggatctactgtcgagcgggcactattgaacccgtgt
ttgaagctggctgtgtacatcatggcatgctgcagatgctgtccaattccatgcctcaaa
aactgcttttcgttttcagcgatatcgcccgctgagctcgatgccttatggaatgaccct
ccatacagtttagctgctgtcagtgagctctttccacccaatgacgtcatgactgctgat
gaggaagtggaggatgaggccgaggtggaggcagaaggcagaagcagagagatttactgg
aagaggaaggaaacattcagcggaagcagcacagtatcttcagcaggagaacgcttttct
ccagatgttgttttgttgtttagtgggagacgccgatctagtgtatcacctgacagtgag
cttcaggaggccttacgtacaagactgcgggtagtagaaagcaacagtcaggatgtcgtc
cagctctttaaggatctctctgcacgactagtgtccgttcatgcagagaaagacagcttt
atcatcacctttaagactgtcgaggagatctggaagttctccacttacctggcacttgga
tatgtagcaagatgtcttgaaaactttctatgtgaccagtcattctggctggaccctgca
ttgctgagcgatgttgagatctgtgtaacagtggatgaagaccacttagctactctttac
ttaggacttctgctacaggaaggtacattcttttctaagactttatacaacagtgactgc
aaagaggaggaagaggaactgaccttgacctacaggaggaatgacctggtcatggtgaaa
gacataggacaagaggccatgtgggagggtacactgctgtccacgggtcaacatggtcta
gtccctgttcatgaaatgcagcctctgccttatccattttaccagtggttccttaagaaa
tatcctggaaatgcaggagggattccagttacagaagggctctttgatcatcctgtagtg
gtgggtacctgtgtggcagtagtggaccattacccaatgggtaaagatgagctgcaccta
tgccagggagacataatcaagattgaaggatttcttctcaatactctgaacatgtttata
ggaaaacacctcaccagtggagagataggatttgttcacaaggcccatgtaaaacccgag
agtatcgagcctctcgatggacaattggtctttctgagtaaggaggaaagggcagcctta
tctaaacttaacccttgccttgagccctgtcagtctgatgtactggcaaatctattctcc
actgacattagcactgtgtacagattggacagacttgatgactctgatttcacttacata
agaaaccatccaatgtcagcagagcagaaaactacagtggatcaacgaaaaagcaccatt
tctgaaaagagtgacgtaactccctaccactcgtccccacggcaatcattatatgcctcc
cggaatcatctggaccgggactctgagatactctctttcagcctggaagacaccttcaga
gagatggacgaatatgaggaagaccctccaaatttcatggatgaatgtatctgggaggct
gatgaagcagagaggtgtgacccaatcctgaccctcctcaacttggaacatttccaggac
actttacagactctttacgacctttcttactcttttctggacactttcttcaattgcctt
ccagaagacgaggtgcttcaacatctggaaaacttacgggaaggagctaaaaaaggcagg
atgctctgggcccaccggcgagtctgcttcctccttggtcggctatgtgccaagaaactg
aagttctctcaagcgcgagtgtactttgaggaagctctaaaagtccctgtaaagggtttt
gatgacaagccacttctaattgccctgtacactaatctcactgctgtttacctcaaacag
aaaatgatggataagctgccatctacgctggataaggcaagtgctctgattctgtgtctt
ccctgccacaacttctgctctgtggatgagtttgagctgctcaaaccaatcatgcgcaaa
gccataattgaaaaggacaagtacctagaggctcggacatgctacctctctctctgtctc
tttatacgtctaaggaaaatagaggatgctttaccttttgtagagaggcttcagttcctt
agcatgactttgtctgctgaagttgggaggccaactgccccaattgatctcaactggatg
ctgtgcaggctttaccataaaaagtatttgccctacctcacactagcttctttaagttta
gattcggggcaagagcattccttggatgatgcattccagaaaattgaactctttatcaga
aactcagccaggcttaatcctcactggaaggaaagcaattctgtgcttcccacacaggtg
gtggtttaccttcagcaggccttgtccatagctagtcaaggagaagacccaaggactcaa
agggacctgtgcctgtgcctagcaagtgtttaccaacagcatggagctctagagaaggct
gtgccctttgcccaacaggcagcacaaactggtagtcaaattaatgaggaggagggcttc
gaggcatccattctgctggcctggctcttggtcctaacggaagaacccgtacaagctcag
aacactctgcacccgctgctcaagtctttgaatgaaaccgacagtccgacacagcttggt
gtagtctataatctcctagccctatgcctccgcaaacagggcagagttcaggaggcagca
agaaacgtttattgcgctctgcagatctcccgagagaatggaaacaagcgtaatgaagca
ctagctctggctaacttgggttgcttgtctctatctctaggggcttcgggcctagcagag
tgtttcttgctcagttcactgcacttattccagtttctctcagagagtcccacagatcag
gagcatgtccaggctcttctctggctgggcaggagctacaaggatagaggagggagtcaa
gaggtcagaatatgcttcgagatgggcctcctgattgctattagtgccaaaaatctacac
agtcaaatggtggtggcaaaagttctaagtcgccattacgcagacttgctgctgtatgga
cagtgtattgtttactatgagcactgtgtgggactgtgcagaacactaaagaataaacag
ctagaaggagagttcctggaactcctcagcaacctctatctctctctcaacactgagaag
tcatcgaggaagtcacttgattactcaaagcaaagcttaaggatctccatagacctgggg
aaaagactggaagagtcagagacatggctgcaagtgggccgtatctattatttgatccat
gaagatgaactggctgacatgtacctgcaggcagcagtaaagacagccctgaggatgaat
gacccatgctttgctatgagcatttatgaggaagcaggagatgtgtttttcaaaggacac
agaaaccaactggctgccctacctttttacagggatggaagtttgccatttgcacgcagc
attaaagatgtggactccgaattcaggcttttgaacaaacttacagagctcctgatgaag
cagaaacactacgaggaagcactgcagtatgctacacttgcagtgcaggtcagcaccgca
actgatgttactttgaatgagagagtgtccttccatcgtcttgcatcagtgtacttctct
ctagggaagtatgagatggctgagaactattacctgaagtctctttcactctgccccact
gcatttgaacatgatattgaacttcggtactatgttaaagtatactgcagactggctgat
ctgaccctatacagattaaaggatgcatttgatgccattggttactaccatttagcattg
gcagctgctcttgaggacaaagaaagcctaagcacactgtacataatctacatgaagctt
gcagagatccatgccaactatatgcctgatgccgaactgtgtatgaactacatggacaga
gcgcaaagtctgaggagggaactggcaggggacacagaggaaacacatcaagacctggtt
gagacagcatctgacaatcaaaccaacgctggtcggtcagactccagcagtggcactagt
actctcacagagtccagcatgactgacaccggccacacaatcgatgccctgaaagagtct
gagctcatattctctaacttaagtcacaaagaagtcacaggcactaacatttctgaggaa
acagacttagggcctgctgacaatatcaatccagagactacctgtccggataaaaatcac
attcacgaaaggagaatgaaggagggcttgactattatgttgtaa
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integrated database retrieval system
