Pimephales promelas (fathead minnow): 120474363
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Entry
120474363 CDS
T08155
Name
(RefSeq) gamma-aminobutyric acid receptor subunit pi isoform X1
KO
K05189
gamma-aminobutyric acid receptor subunit pi
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04080
Neuroactive ligand-receptor interaction
pprm04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120474363
04082 Neuroactive ligand signaling
120474363
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pprm04040
]
120474363
Ion channels [BR:
pprm04040
]
Ligand-gated channels
GABA-A
120474363
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
120474363
NCBI-ProteinID:
XP_039520502
LinkDB
All DBs
Position
Unknown
AA seq
445 aa
AA seq
DB search
MLLYLLFWASLFLLITNGERGFYGNQYGEWNDSQLQPTIQKLMKGYNRYLRPNFNQGPVK
IGMSLDIASIDAISEINMDYTATIFLRQRWQDSRLIFPGNESLSLDGRLVSLLWIPDTFI
PDSKRSFLHDVTVENRLIRIFSNGTVLYALRITATIACNMDLTKYPMDRQECTLQLESWG
YNLQDVVFYWTRGNDSVKGLDTLRLAQYSVESYYTTVSEAVYETGFYPKLVLHFALRRNV
LFFILETYVPSTLLVVLSWVSFWISQSSVPARTCIGVTTVLTMTTLMMGARTSLPNANCF
IKAIDVYLGICFTFIFGALLEYACAHFCTMQHQTIVDVQRELLREFDESNGAAHLVNSMS
PKKMQKVDSTQQETPEQSVACEGDEAVDKTQEKGCGLSSVKQMSHRAASMMSVENPHNID
RHSRTLFPMAFLLVNIFYWLYYLLF
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgctgctctatcttctgttctgggcgagtctatttctgttgattacaaacggtgaaaga
ggattctatgggaatcagtatggtgaatggaatgattcgcaactgcagcccaccatacag
aagctgatgaaaggctacaatcgatacctaaggccaaactttaaccaggggcctgttaaa
attggaatgagtttggatattgccagcattgatgccatctctgagattaacatggactac
acggccactattttcctaagacaacgatggcaagattcccgactgatatttcctggaaat
gaaagtctgagtctggatggacggctggtttctttgctgtggatccccgatacgttcatc
cctgattctaagcgttccttcctccacgatgtcactgtggaaaaccgcctgatccgcatc
ttcagcaatggcaccgtgctctacgctctccgcattacagcaaccatcgcctgcaacatg
gacctcaccaagtatcctatggatagacaagagtgtactttgcaattagaaagctgggga
tataatttacaggatgtggtgttttactggacccgagggaatgactcagtgaaggggtta
gacacactgcgtctggcccagtacagcgtagagagctactacacaaccgtatctgaagct
gtgtatgaaacaggtttttacccgaagctagtgctccacttcgctttgcgcagaaacgtg
ctgttcttcattctggagacgtatgtgccctcaacattgctggtggttctgtcatgggtg
tctttctggatcagtcagtcctccgtaccagctcgcacctgcatcggggtgaccacagtt
cttaccatgaccacactaatgatgggtgcgaggacctcacttcctaatgccaactgcttc
attaaggctattgacgtctatctcggcatctgtttcaccttcatctttggtgctctgctg
gaatatgcctgcgctcatttctgcaccatgcagcaccagaccattgtagatgtgcaaagg
gaactactcagagaattcgatgagtcaaatggtgcggctcacttggtcaattcaatgtca
ccaaaaaagatgcagaaggtagactccactcagcaggagacgccagagcaatctgtggca
tgtgaaggggatgaggcagtggacaagacacaagagaaggggtgcggtttatcctctgta
aagcaaatgtctcatcgagcagcatccatgatgagtgtcgagaatcctcacaacatcgac
agacactcaaggacactgttccctatggcatttctcctcgtcaatatcttctactggctc
tattaccttttgttctaa
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