Pimephales promelas (fathead minnow): 120474436
Help
Entry
120474436 CDS
T08155
Symbol
sox3
Name
(RefSeq) transcription factor Sox-3
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120474436 (sox3)
Transcription factors [BR:
pprm03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
120474436 (sox3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
120474436
NCBI-ProteinID:
XP_039520631
LinkDB
All DBs
Position
Unknown
AA seq
299 aa
AA seq
DB search
MYNMMETEIKSPLPQSNTGSAAGGKNNSANDQDRVKRPMNAFMVWSRGQRRKMAQENPKM
HNSEISKRLGADWKLLTDAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKDKYS
LPGGLLAPGANAVNSAVSVGQRMDYTHMNGWTNSAYSLMQDQLAYTQHPSMNSPQIQQMH
RYDMAGLQYPMMSTAQTYMNAASTYSMSPAYTQQTSSAMGLGSMASVCKTEPSSPPPAIT
SHSQRACLGDLRDMISMYLPPGGDSAEHSSLQTSRLHSVHPHYQSAGTGVNGTLPLTHI
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgtataatatgatggaaaccgagattaaaagcccccttccgcagtccaacacgggctcg
gcggccggtggcaaaaacaacagtgccaacgaccaggaccgggtgaagcggcctatgaat
gctttcatggtgtggtcccgcggtcagcggaggaaaatggcacaggagaatcctaaaatg
cacaactctgagatcagcaagcgcctcggtgctgactggaaacttttgactgacgccgag
aagagacccttcattgacgaggccaagcggttacgagccatgcacatgaaggagcacccg
gattacaaataccgtccccgcaggaagaccaagaccctgctgaagaaagacaagtattcc
ttgcccggaggactcttggcgcccggtgccaacgctgtcaacagcgccgtctcggtgggc
cagcggatggactacacgcacatgaacggctggacgaacagcgcgtactccctcatgcag
gaccaactggcctacactcagcatcccagcatgaacagcccccagattcagcaaatgcac
cggtacgacatggctggacttcagtacccgatgatgtccacggcccagacctatatgaac
gcggcgtccacgtacagcatgtcaccagcatacacgcagcaaacttccagtgcaatgggt
ttgggctccatggcttcagtgtgcaagacggaacccagctctcctcctccggccataacc
tctcactctcagcgtgcttgtttgggagacctgagggacatgataagcatgtacctgccg
cccggaggagacagcgccgagcactccagtctacagaccagtcggttacacagcgttcat
ccacactatcaaagcgcagggactggcgtgaacggaacgctacccctaacccacatttga
DBGET
integrated database retrieval system
