KEGG   Pimephales promelas (fathead minnow): 120474513
Entry
120474513         CDS       T08155                                 
Symbol
chad
Name
(RefSeq) chondroadherin
  KO
K06248  chondroadherin
Organism
pprm  Pimephales promelas (fathead minnow)
Pathway
pprm04510  Focal adhesion
pprm04512  ECM-receptor interaction
pprm04518  Integrin signaling
Brite
KEGG Orthology (KO) [BR:pprm00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    120474513 (chad)
   04518 Integrin signaling
    120474513 (chad)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    120474513 (chad)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:pprm00535]
    120474513 (chad)
Proteoglycans [BR:pprm00535]
 Extracellular matrix (ECM) proteoglycans
  Small leucine-rich proteoglycan (SLRP) family
   class IV
    120474513 (chad)
SSDB
Motif
Pfam: LRR_8 LRR_4 LRR_1 LRR_5 LRRNT LRR_14 LRR_9 LRR_NXF1-5 LRR_EndoS A-2_8-polyST LRR_R13L1-DRL21
Other DBs
NCBI-GeneID: 120474513
NCBI-ProteinID: XP_039520758
LinkDB
Position
Unknown
AA seq 361 aa
MYSFSFLLVLVCLQVCVPFVFAAPTQCPSQCHCHGDLQHVICDNVGLKKIPRISEATRLL
NLQRNNLGSLPTGGFSEMKGLISLHLQHCQIREISSQAFKGVKKLIYLYLSNNEISTIKP
GAFEDLTELTYLYLDGNHITILPKGIFSPMVNLFTLQLDNNKLRELQPGTFTGANDLRWL
YLSRNELSSIQPGSLDEVENLAILTLDRNQLSTYPLLAMSKLRVVEELNLSKNPLSLIPD
HAFRSFGRYMEKLHLNDMSLEKFSNAAFEGVTALKSLHLENNKLKSLPNSLEFSTLQNLT
LFNNPWSCTCQLANLKKWMDTSPNRPDAVCASPGNQKGKQIRESTAFTRCKAKRTRKGPR
I
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgtacagtttcagcttcttactggtgctagtgtgtctacaggtttgtgtcccttttgtg
tttgccgcaccaactcagtgcccaagccagtgccactgccatggggacctgcaacacgtt
atctgtgacaacgtcggactgaagaagatcccccgcatatccgaggccactcgtctccta
aatctgcaaaggaacaacttaggaagtctcccaactgggggtttcagcgagatgaagggg
ctaatttctctgcatctgcagcactgtcagatccgcgagatctccagccaggctttcaaa
ggggtaaagaagctcatctacctttacttgtctaataatgagatcagcaccatcaaacca
ggtgcttttgaggacctaaccgaactgacctatctctatttggacggtaaccacatcaca
atccttccgaagggcatcttttctcccatggtcaacttatttacccttcagctcgacaac
aacaagcttcgagagctgcagcctggtactttcacgggtgctaatgatctccgatggctt
tatttgagcagaaacgagttgagctccatacagccaggttctcttgatgaagtggagaac
ctggccattctaaccttggaccgtaaccagctgtccacataccctcttctggctatgagc
aaactgcgtgtcgtggaggaactcaacttgtccaaaaaccctctcagcctcatccctgac
cacgcattccggagcttcggccgctacatggagaagctacatctaaatgacatgagcctg
gagaagttctccaatgctgcctttgagggagtgacggctctcaagtctctgcatcttgag
aacaacaagctgaaatcgctgccgaacagccttgagtttagcactctccagaacctcact
ctgtttaacaacccctggagctgcacctgccaattagcaaatctcaaaaaatggatggac
actagccccaatcgccctgatgcagtttgtgcttctcctggaaaccagaaaggaaagcaa
ataagagagagcactgctttcacccgctgcaaagcaaagaggaccaggaagggaccacga
atctga

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