Pimephales promelas (fathead minnow): 120474523
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Entry
120474523 CDS
T08155
Symbol
zeb1b
Name
(RefSeq) zinc finger E-box-binding homeobox 1b isoform X1
KO
K09299
zinc finger homeobox protein 1
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120474523 (zeb1b)
Transcription factors [BR:
pprm03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
120474523 (zeb1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
Homeodomain
zf-met
zf-C2H2_15
zf-C2H2_6
Zf-C2H2_ZNF451_C
DUF6801
Zn_SUZ12
Motif
Other DBs
NCBI-GeneID:
120474523
NCBI-ProteinID:
XP_039520771
LinkDB
All DBs
Position
Unknown
AA seq
1076 aa
AA seq
DB search
MADGPRCKRRKQANPRRTNVSNYSHVLEGQSDSDDEDKLHIVEEEGSLLDGADCDSVAPD
DDPNGAADPDGRWDDVKEECVSDEDERSRDALVEEMLQQGDTAVIYPEAPDDEPRQGTPE
TSGHDENGTPDSFSQLLTCPYCSRGYKRYTSLKEHIKYRHEKSEDNFSCSLCSYTFAYRT
QLDRHMTAHKAGREQRHVTQSGGGGNRKFKCTECGKAFKYKHHLKEHLRIHSGEKPYECS
NCKKRFSHSGSYSSHISSKKCIGLISVNGRPRPSPATGAAKTPQCSSPSLPTSSPTARVQ
VRDKLDNSKPLQEQLPLTQIKSEPLDYEYKPVVVAPSARGVNGMFQGGASAPLQGAVQAV
VLPTLVSPISINLGDLQNVLKVAVDGNVIRQVLESTQTKGQQAGTGIVGAGGLGIAQASQ
QVIQAISLPILDQDGNAKIIINYSLDPSQAQALLQSPKKEPLGLNTEVCKAQKLPEDLTV
KTNRDKTTITVDEKSMLHNDTTLKHCGKDGHRVNGKNLDGKMDLEEGLCPGQPPLKNLLS
LLKAYFALNNEPTKEELAKISESVSLPAEVVKKWFEKMQLGQISIDPTSPLAEDEQTTPG
DLDGTRGGSPRTEPDDQMNSEEQGERECSSPVEDIAAGVNGIESVPTSPSPLNLSADGPV
PARTLEEGEGPLDLSLPKSAATAPVASGHVNTVYSAQEEPLNLTCTKKELLSNASTNAAI
FASQPSANPINIVTTQLPTLVAITDQGQAQCLRALATTKQTILIPQLTYSYTTTSSSPAG
ADTPQKNVIHVNGIKEEKQEMGSEVTSTLEEQTDSDSGPTRKKMKRTESGLYACDLCDKI
FQKSSSLLRHKYEHTGKRPHECGICSKAFKHKHHLIEHLRLHSGEKPYQCDKCGKRFSHS
GSYSQHMNHRYSYCKKEAQGQGLGQGVEEEDNHGEEQPRTGSAAASPPSHLDSDERGSST
REDESEEEDEIGSGSLVDEDEIQVVKIGEEGDEDDQGADEDQEGEGERMEEAEQEENDGR
MLKVVVMQDECEEEENGEEERTAEEAMDTGAPEHMKDTNPADNEKNSENEANTAVK
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaagcaggcgaacccgaggaggacaaatgtg
agtaactacagtcatgtgctggagggccagtcagactcagatgatgaagataagcttcac
attgtggaggaggaagggagtcttctggacggggctgactgtgacagcgtggcccctgac
gatgaccccaatggggccgccgacccggacggcagatgggatgatgtgaaagaggagtgt
gtgtcagacgaggatgaaaggagcagagatgctttggttgaggagatgctacagcaagga
gacacggcagtcatctacccagaggctccagacgacgaaccgcgtcagggcacaccagaa
accagtggacatgatgaaaatggcacaccagactcattttctcagcttctcacctgcccg
tattgttcccgtggctacaagcgttacacctcactgaaggagcacattaaatacagacac
gagaagagtgaggacaacttcagctgctctctctgtagttacacctttgcctaccgaaca
cagctggacagacacatgaccgcacacaaagctggcagagaacagcggcatgttactcag
tcaggtggaggagggaatcgaaagtttaaatgcactgaatgtggcaaagccttcaagtac
aaacaccacctgaaagaacacctgcgcatccacagtggagaaaagccttatgaatgctcc
aactgcaaaaagcgtttctctcattccggctcctacagttcccacataagcagtaagaag
tgtatcggcctcatctcagtaaacgggcggccacgaccttctcccgccaccggggctgcc
aagaccccgcagtgctcttccccatccctgccaacctcttcccctacagcacgtgtccaa
gtcagagacaaactggacaacagcaaaccccttcaggagcagcttccattgacgcagatc
aagtctgagccgctggactatgagtacaagcctgtggtggtggccccatctgctagaggc
gtaaatggcatgttccaaggtggggcgtcagcccctctccagggtgccgttcaggctgtt
gtgctcccaacactggtatccccaatcagcatcaacctgggggacttacagaatgtgctg
aaggtagcagtggatggcaacgtcatcaggcaagtgttggaaagcacgcaaactaaaggg
cagcaagcggggacaggaatcgttggtgcaggagggttgggaattgctcaagcatcccag
caagtcatccaggccattagtctccccatcttggatcaggatggcaatgctaagatcatc
atcaactacagtctggacccgtcacaggcccaagcactccttcaaagtccgaagaaggaa
cctttggggttgaacacggaggtctgcaaggctcaaaagctgccagaggacctgactgtg
aagacaaatagggacaaaaccaccatcactgtggatgaaaagagtatgttacacaatgac
acaacacttaagcactgtggtaaagatggacatagggtaaacgggaaaaatcttgacggg
aagatggacttggaggaaggactgtgtcctggtcagcctcctctgaagaaccttctctcc
ttgcttaaggcttactttgccttaaacaatgagcccaccaaggaggagctggcaaagatt
tccgagtctgtcagtcttccagcagaggtggtaaagaagtggtttgagaagatgcagctg
ggacagatctccatagaccccacctcacccctggctgaagacgagcagaccacccctggg
gatttggatgggactagaggtggatcgcccagaacagagccagatgatcaaatgaactca
gaggagcaaggggagagggaatgcagtagtccagtagaggacatagcagctggtgtgaat
gggatcgagagtgtccctacatccccttcaccactaaacctatcggccgatggtcctgtc
ccggccaggactcttgaagaaggcgaaggacctctcgatctgtcgctaccaaaatccgct
gctacagctcctgtggctagcggtcacgttaacactgtttactcggctcaagaggagcca
ctgaatttgacttgcacaaagaaggaactgctcagcaatgcaagcaccaatgctgccata
tttgccagccaaccaagtgccaatcccataaacattgtgaccactcaactgcccacccta
gtggctatcactgaccagggacaagcacaatgtctacgtgcacttgccaccactaaacag
accatcttgatcccacagctgacatacagttacaccactacatcctccagcccagcaggg
gccgacacaccacagaagaacgttatacacgtcaatggcattaaggaggagaaacaggag
atggggtcagaggtcacctcaacattggaagaacagacagactcagactcagggccgacg
aggaagaagatgaaaaggacagagagtgggctgtatgcctgtgacctgtgtgacaaaatc
ttccagaagagcagctcattgctccgccataaatacgaacacacaggaaagaggcctcat
gaatgtgggatctgcagcaaggccttcaaacacaagcaccacctaatagagcacctgcgc
ttgcactccggagaaaagccgtaccagtgtgacaagtgcggcaagcgcttctcccactcc
ggctcgtactcgcaacacatgaaccacagatactcctactgtaagaaagaggctcaaggt
caagggctaggccaaggagtcgaggaagaggacaaccacggcgaggagcagcctcggacg
ggaagcgcggcggcctcacccccttcccacctggattcggacgagcgggggagtagtacc
agagaggatgagagtgaggaggaggatgagataggctctgggagcttagtggatgaggat
gagattcaggtggtcaagattggagaagagggagacgaagacgaccagggagcagatgaa
gaccaggaaggggagggagagaggatggaggaggcggaacaagaggaaaatgacggacgg
atgctgaaagttgtagtgatgcaggatgaatgtgaagaggaagaaaatggggaagaggag
cgaacggcggaggaagccatggacacaggagcccctgaacacatgaaggacacgaacccg
gcggacaatgagaaaaacagtgaaaatgaagcaaacacagccgtgaaatga
DBGET
integrated database retrieval system
