Pimephales promelas (fathead minnow): 120474550
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Entry
120474550 CDS
T08155
Symbol
psmd11b
Name
(RefSeq) 26S proteasome non-ATPase regulatory subunit 11B
KO
K03036
26S proteasome regulatory subunit N6
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
120474550 (psmd11b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pprm03051
]
120474550 (psmd11b)
Proteasome [BR:
pprm03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
120474550 (psmd11b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RPN6_N
PCI
RPN6_C_helix
TPR_ESP1
Csm6_6H
DDRGK
TPR_12
Motif
Other DBs
NCBI-GeneID:
120474550
NCBI-ProteinID:
XP_039520827
LinkDB
All DBs
Position
Unknown
AA seq
422 aa
AA seq
DB search
MAAAAVVEFQRAQSLISTDRNASIDIFHSIVRRDVQEDDEEAVRVKEQSILELGTLLAKT
GQAAELGGLLKFVRPFLISISKAKAARLVRSLLDLFLDMEAATGQEVELCLECIEWAKVE
KRTFLRQALEARLISLYFDTKRYQEALHLGTQLLQELKKMDDKALLVEVQLLESKTYHAL
SNLPKARAALTSARTTANAIYCPPKLQAALDMQSGIIHAAEEKDCKTAYSYFFEAFEGYD
SIDSPKAVTALKYMLLCKIMLSLPEEVQALISGKLALRYAGRQTDALKCIAQASKNRSLA
DFEKALTEYTKELRDDPIISTHLTKLYDNLLEQNLIRVIEPFSRVQITHIAGLIKLSKDD
VERKLSQMILDKKFHGILDQGEGVLIIFEEPPVDKTYEAALETIQNMSKVVDSLYNKAKK
LT
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atggcagccgcggcagtagtggagtttcagagagctcagtctctcattagcacagacaga
aacgcttctattgacatttttcattcaatagtgagacgagatgtccaggaggatgatgaa
gaggcggttcgtgtcaaggagcaaagcatcctggagctgggcactctcctggccaagacg
ggacaagctgcagaacttggaggcctgctgaagtttgtgagacctttcctgatctccata
agcaaggcaaaggcagcacgtttggtgcgctcgctactggatctatttctggacatggag
gcagccacgggccaggaggttgagctgtgtctcgaatgcattgaatgggctaaagttgag
aagagaaccttcctcagacaggccctagaggctcgactcatttcactctattttgacacc
aagagataccaggaagcccttcatctaggcacacagttgctgcaggagctgaagaagatg
gatgataaagctctgctggtggaagtccagctgctagagagtaaaacctaccacgctctc
agcaaccttcccaaagccagggctgccctcacctcagccaggaccaccgccaatgccatt
tactgtcccccaaagctccaggcagctcttgatatgcagtcaggtatcatccatgcagct
gaggaaaaagattgtaaaactgcctattcttacttcttcgaggctttcgagggctacgat
tccattgacagccccaaggcagtcactgcactgaaatacatgcttctctgcaagatcatg
ctcagcttgccagaggaggtacaggccttgatcagtggcaaactggctctgcgatatgcg
gggcgacagaccgatgcactgaagtgtatagcacaagccagcaagaacagatcattagca
gattttgaaaaggccctgacagagtacactaaagagctgagggacgaccccatcatcagc
acgcatttgaccaagctttacgacaatttgctggaacagaacctcattcgggtcattgag
cctttttccagagtacagattacacatatagctggtctcatcaaactctcaaaggatgat
gttgagaggaaactgtcacaaatgatcctggacaaaaagttccatggaatccttgaccaa
ggtgaaggagtgctcatcatatttgaggagccgcccgtggacaagacttatgaggcagct
ctagaaaccatacagaacatgagcaaagttgtggattcactgtacaacaaggctaagaag
ttaacatag
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