Pimephales promelas (fathead minnow): 120474572
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Entry
120474572 CDS
T08155
Symbol
valopb
Name
(RefSeq) vertebrate ancient long opsin b
KO
K04256
c-opsin
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pprm01009
]
120474572 (valopb)
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
pprm04030
]
120474572 (valopb)
Protein phosphatases and associated proteins [BR:
pprm01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120474572 (valopb)
G protein-coupled receptors [BR:
pprm04030
]
Rhodopsin family
Vision
Opsin
120474572 (valopb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srw
7tm_4
7TM_GPCR_Srsx
Motif
Other DBs
NCBI-GeneID:
120474572
NCBI-ProteinID:
XP_039520873
LinkDB
All DBs
Position
Unknown
AA seq
399 aa
AA seq
DB search
MSALNAVMESFVSLVTESTDITPPDDPFTGPIKSIAPWNYTFLACLMFIVSSLSITENFT
VMFVTFRYKQLRKPLNYIIVNLSVADFLVSLTGGTISFLTNARGYFFLGVWACVLEGFAV
TFFGIVALWSLAILAFERFFVICRPLKNVRLGGKHAAMGLVFVWTFSFICTIPPVLGWNS
YTVSKIGTTCEPNWYSTDYYDHTYIITFFITCFILPLGVIIISYGKLMQKLRKVSNTHGR
LGNARKPDREVARMVIVMIVAFMVGWTPYAAFSIIVTACPTIYIDPRLGSIPAFFSKTAA
VYNPIIYVFMNKQFRKCLIQMFRGNVSNLDSTNLNQTSDRGPITATGDSHLGEMSTIAVR
VPMSTCSLKKCKDEEEEPEQSGNGGSNQLPLSDSQGCPL
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccctaaacgctgtcatggaatcgtttgtgtctttagtcaccgagtccaccgac
atcaccccaccggacgatccgttcacgggtcccatcaagtctattgcgccctggaattac
actttcctcgcctgtctgatgttcatagtgtcttcactgtcgataacagagaacttcacc
gttatgttcgtgacgtttagatacaaacagttaaggaaaccgttgaattacatcattgta
aatttatctgttgccgattttctagtttcactgacaggaggcactataagttttttaact
aacgcacgaggctacttcttcctgggtgtctgggcgtgtgtgctggagggattcgctgtc
acttttttcgggattgtggctttgtggtctttagcaatcttggcattcgagcgttttttt
gtgatctgtcgtcctctgaaaaatgtccgtctgggaggcaagcatgcagctatgggtctt
gtttttgtttggaccttctctttcatctgtacaatcccgccggttctgggttggaacagt
tatacagtcagcaaaattggcactacctgtgaacccaactggtactcaactgattactat
gaccacacctacatcatcacctttttcattacatgttttatccttcctcttggtgtgatc
attatctcctatggtaaacttatgcagaagctcagaaaggtatcgaacactcatggaaga
ctgggtaatgcgcgtaagcctgaccgagaggtggcgaggatggtcattgtaatgatagtt
gcgttcatggttggatggacgccttatgcagcattttcaatcattgtcacagcctgtccc
acaatttatattgatcctcgcctgggctcaataccggccttcttctcaaagactgcagct
gtatacaatcccatcatctatgtcttcatgaataagcagttcaggaagtgtctgatccag
atgtttagaggaaatgtcagcaatctggattccaccaatctgaaccagacatcagacaga
gggcccatcactgccacaggtgacagtcaccttggagagatgtccaccattgcggttcgt
gtgcccatgtccacgtgcagcttgaagaagtgtaaggatgaagaggaagagccggagcag
agtgggaatggaggttcaaaccagctccctttatcagatagtcaaggatgtcctttgtag
DBGET
integrated database retrieval system
