Pimephales promelas (fathead minnow): 120474625
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Entry
120474625 CDS
T08155
Name
(RefSeq) 5-hydroxytryptamine receptor 3A-like
KO
K04819
5-hydroxytryptamine receptor 3
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
120474625
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pprm04040
]
120474625
Ion channels [BR:
pprm04040
]
Ligand-gated channels
Serotonin (5-HT3)
120474625
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF3700
Motif
Other DBs
NCBI-GeneID:
120474625
NCBI-ProteinID:
XP_039521025
LinkDB
All DBs
Position
Unknown
AA seq
447 aa
AA seq
DB search
MSSFLVCVTCLLFLIDGVYLKQVCSKQDVLEYLNLTRGNEKFTTCRPALDWTHPTVVYVD
IYLYGILSMIEKSQIFVPLLWMSVSWNNERIYWDPKEFCGIKNVTLPKEMLWKPDLYVLE
TAEKEDGPLNPFLVITHDGNVIMEEDHKIVSTCTMNVHKFPFDTQTCHITVTSINHSDKE
IKLVPASNSSKATQVARESILTQGEWVFLNISVSMDKDNYEGQTFDRIKYTISVKRMPLM
HFINFQLPILFFLILDLASFFIPDRGEKLCFKVTVLLGISVLLLILNDILPSKSHRCPLI
ATYVIVIFSFMLLSLLETILVIYLINMSSEQDTKLVQRPEDLNCETDKCKGDSSDHICYS
LVEAPLETLMLKEIYSKDKMNDLHLLQMILEELQTIKQTLPPHTLKGHTGQKYWLGMVKY
INRLFYVVYLISISLFLGFIFREWKVE
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgagttctttccttgtctgtgttacctgtctactttttctaatagatggagtgtacctt
aaacaagtatgcagtaagcaagatgtgctggaatacttaaatctcaccagaggcaatgag
aaattcacaacttgccgtcctgcactggactggacacaccccactgtagtgtatgttgat
atttacctatacggcatcctttctatgattgaaaaatctcaaatctttgtacctctttta
tggatgtctgtgagctggaacaatgaacgaatctattgggatcctaaggagttctgtggc
attaaaaatgtgactttaccaaaagagatgctttggaaaccagacctgtatgttcttgag
actgcagagaaggaggatggaccactaaacccatttttggttatcactcatgatggaaat
gtgataatggaggaggaccataaaattgtcagcacctgcacaatgaatgtgcacaaattt
ccttttgatactcaaacctgccacattacagtgacttcaattaatcactcagataaagaa
ataaagctggttcctgcctccaattcatcaaaagcaacacaggtagctcgggaaagcata
ttaacccaaggagaatgggtattcttgaacatatccgtctcaatggacaaagataattat
gagggccaaacttttgacaggataaagtacacgatttcagtcaaaaggatgcccctgatg
catttcatcaattttcagctaccaatattgtttttcctcattttggacctagcttctttt
ttcataccagatagaggggagaaactgtgcttcaaagtgacggtactactggggatctct
gtacttttgctcatcctaaatgacatcctgccatccaaatctcacagatgtcctctgatt
gctacgtatgtcattgtcatcttttccttcatgttgttgagtcttctggagacaattttg
gtgatatacttaatcaatatgagctctgaacaagacactaagctggttcagagacctgaa
gatctcaactgtgaaacagataaatgcaaaggagacagcagtgatcacatctgttattct
ctagtggaggctcctctagagactctgatgttgaaggaaatatacagcaaagacaaaatg
aatgacttgcacttattgcagatgatcctggaagagcttcagactattaaacagactctt
cctccccatactttaaaaggccatactggtcagaagtactggttaggaatggtcaaatac
attaacaggcttttctatgtggtttatctcatctcaatttctctctttcttggtttcata
tttcgagagtggaaagttgagtaa
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