Pimephales promelas (fathead minnow): 120474629
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Entry
120474629 CDS
T08155
Symbol
grin2cb
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04020
Calcium signaling pathway
pprm04080
Neuroactive ligand-receptor interaction
pprm04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
120474629 (grin2cb)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120474629 (grin2cb)
04082 Neuroactive ligand signaling
120474629 (grin2cb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pprm04040
]
120474629 (grin2cb)
Ion channels [BR:
pprm04040
]
Ligand-gated channels
Glutamate (ionotropic)
120474629 (grin2cb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
NMDAR2_C
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
120474629
NCBI-ProteinID:
XP_039521030
LinkDB
All DBs
Position
Unknown
AA seq
1328 aa
AA seq
DB search
MATPQWCWGPSLQLLFFFHLLLNVVPPCRGRPFFGPPSVNVAVVFSGMAHHSEIKGRLSP
ENFLDMPLEVNPITVLVNDTNPRALLTRLCQTMAAESLHGVVFEDDVDSEAVAQILDFIS
SQTSIPIVGISGGSAVVIPHKAEGSTFLQMGSSIEQQINAMFKVMEEYNWGNFVVITSLY
PGYETFVDYIRSFTDTSYFLWELQDVLSFEMSVGANDIRTRRLLQQVDSQVYLVYCSHEE
AQYLFRMASDVGLMGPGYIWVIPSLAVGNPEISPPDSFPVGVISIITDRWRKTLRQRVRE
GVAVIVKGVYSFHKHRGFIPEGHSDCNSPAKLNANNSLFRHMRNVSWEHKDLSFNADGYL
TNPSMVIIALDRERHWDKVGNYEGGILQMRYPVWPRYGSFLEPVSDNRHLTVATLEERPF
VVVESVDPATGTCVRNTVPCRRQSNRTESITGHTEPYTKLCCKGFCIDILKKLSRTIKFS
YDLYLVTNGKHGKMVRGVWNGMIGEVFYKRADMAIGSLTINEERSEIVDFSVPFVETGIS
VMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVTVFVFEYFSPVGYNRSLVSAKAP
GGPTFTIGKSVWLLWGIVFNNSVPIENPKGTTSKIMVLVWAFFAVIFLASYTANLAAFMI
QEQYIDTVSGLSDKKFQKPQEHYPPFRFGTVPNGSTERNIRSNYPDMHTHMVKYNQKGVE
EALNSLKTGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALQKDSRWKRP
IDLALLQFLGDGDTQRLETVWLSGICQNEKNEVMSSKLDIDNMAGVFYMLLVAMGLSLLV
FAWEHLLYWKLRHSVHKSDHLDFLLAISRGIYSCFNGVEDFGRSISIQNPDLTANYAQAN
MLKMLQTAKDIVSSAKVENSLDNATKTIENWSRHGGSLPARIPLVTTTEKVPGHFSYISN
VTENHIPHMQHSITPPFMQHTKTTSPPPMVNHRVLTRPTPLRYTLPARTRGLYDGMLPVS
SLSTPHLAMHDPPSDLAHPGSSFVPYRDMYTEHHKSCHNDFSDAVRRKKRPQNLIVESMD
LRGLHDYKDQSTCHSEANSFAENHLSSSFGENPFVAADTACNSCVKTYFEPAFDDIPLIG
KRKLHRRPSFLKATWGPDRVRFQNDRSTAAASSRGAIPDLFPCVDVHGRVRNTMCYAQPM
DHTYLHAFRRNTRKSQKLRHSQSTRLPTYKEAIFHNVAAVRRASSLVHRPYSYPELPVYQ
SPLSYGPAELCNIFPCMGHPSDSVYGGYRVPTHLQDDHLVPVPGSRVVHSSPIVPMTWGR
ISSLESEV
NT seq
3987 nt
NT seq
+upstream
nt +downstream
nt
atggccactcctcaatggtgctggggtccctctcttcaactcctcttcttctttcatctg
ttactcaatgtagtgcctccctgtcggggacgtccattctttggccctccttcggtcaac
gtggctgtggttttcagtggtatggcccaccacagtgagatcaagggccgtctgagtcca
gaaaacttcctagacatgcccctggaagtgaaccccatcaccgtgcttgtgaacgacact
aaccccagggcattactcacacgtctctgtcagactatggcagcggagagcctccacgga
gtggtgtttgaagatgacgtggactcagaagccgtggcacaaatcttagactttatctcc
tctcagacgtccattcccatagttggcatcagtggaggttctgcagttgtcatcccacat
aaagctgaaggctctacctttctccagatgggatcttctatagagcagcaaataaatgca
atgttcaaagtgatggaggagtacaactggggtaactttgtggtgatcaccagtttatat
cctggctacgagaccttcgtggactacattcgctccttcacggacaccagctacttcctg
tgggagttgcaagatgtgctgagcttcgagatgtccgtgggggccaatgacatccgcaca
cgtagactactacagcaggtggactcgcaggtatatctagtgtactgttcccacgaggag
gcacagtacttgtttaggatggcctctgatgtggggcttatggggcctggatacatctgg
gtcatccccagtctggctgtggggaaccctgaaatatccccccctgacagtttcccagtg
ggcgtcatcagtattatcacagaccgctggaggaaaacactgcgccagagggttcgggaa
ggagtggcagtcattgtaaaaggggtgtacagtttccacaagcacagaggatttattcct
gagggtcatagtgactgcaatagtcctgccaaattgaatgccaacaattctctgttcagg
catatgcgaaatgtgtcatgggagcacaaggacctctccttcaatgctgatggctatctc
actaatccttccatggtgatcattgctttggatcgagagagacactgggacaaggtagga
aactatgagggagggattctgcagatgcgttaccctgtatggccccgttatgggagcttc
ctggagcccgtatctgacaaccgccacctgaccgtggccaccctggaggagaggcctttc
gtcgtcgtggagagtgttgatcctgccacaggcacttgtgtgcgcaatactgtgccgtgt
cgtcggcagtccaaccggactgaaagtataaccggtcacactgagccttacaccaaactc
tgctgcaaaggcttctgcatagacatcctaaagaagctctcacgaacaatcaagttttca
tatgacctttatctggtcaccaatgggaaacatggcaagatggtccgtggcgtctggaat
gggatgattggagaggtcttctacaagcgtgcagatatggcaattggctctcttaccatc
aatgaggagcggtcagagattgttgacttttcagtgccatttgtggagaccgggattagt
gttatggtggccagaagcaatggaacagtctcaccttctgccttcctggagccttacagt
ccagccgtgtgggttatgatgttcgtaatgtgcctgactgttgtggcagtcaccgtgttc
gtctttgagtacttcagccctgttgggtataaccggagccttgtcagtgccaaagcccct
gggggtccaaccttcaccattggaaagtctgtctggctcctatggggaatcgtcttcaac
aactctgttcctattgaaaaccccaaaggcacaaccagcaaaattatggtcctggtttgg
gctttctttgctgtcatcttcctcgccagctacacagccaatttagctgccttcatgatc
caagagcagtacattgacacagtgtctggacttagtgacaaaaagtttcaaaaaccccag
gaacattatcctccttttcggttcgggacagtcccaaatggcagcacagagaggaacatt
cgaagcaattaccctgacatgcacacccacatggtaaaatacaaccagaagggtgtggaa
gaagctctcaacagccttaagacagggaagttggatgccttcatatatgatgcagcagtt
cttaattatatggctggcaaggacgagggctgcaagctggtcaccattggtagtgggaag
gtgtttgctaccacaggctacggcattgctctgcagaaggactcccgctggaagcgcccc
atagacctggctctcctccagttcctgggagatggggacacacagagactggaaacagta
tggctgtctggaatatgtcagaatgagaaaaacgaggtcatgagctctaaactagacata
gacaacatggcaggtgttttctacatgttgctcgtggccatgggcctcagcctgctggtc
tttgcttgggaacatctactttactggaaactgaggcactctgtccacaagtctgatcac
ttagactttctactggctatcagcaggggcatatacagctgctttaatggcgttgaagac
tttggcagatctatcagcattcagaatccagatctcacagccaattacgcccaggccaac
atgctgaaaatgctgcagacagccaaggacattgtctcctcagccaaagtggagaactca
ttggataacgccaccaagaccattgagaactggagcagacacggcggcagcctcccagca
cgtatcccactggtgacaacaactgaaaaagtcccaggtcacttctcgtatatctctaat
gtcacagagaaccacatacctcacatgcagcattccataactccacctttcatgcaacac
accaaaaccactagcccaccaccgatggtaaaccatagagttctaacccggcccactcct
cttcgctacacacttcccgccaggaccaggggtctctacgacggtatgcttcctgtatcc
agtctaagcacacctcatctagcgatgcatgatcctccctccgacctggcccatcctggt
tcttcctttgttccatacagagacatgtacaccgaacaccacaagtcttgtcacaatgat
ttttcagatgccgtcaggaggaaaaagagaccccaaaatctcattgtggagtccatggat
ctgagggggcttcacgattataaagaccaatcaacatgtcatagcgaagcaaacagtttt
gctgaaaaccacctgtcctcttccttcggcgaaaatccttttgtagcagcggacacagct
tgtaattcctgtgtcaaaacgtactttgagcctgcgttcgatgacataccgttgataggg
aaaaggaagcttcatcgcagaccgtcgttcctgaaagccacttggggccccgacagagtc
cggttccagaatgacagatccactgcagcagcctcctcacgaggagctatacccgacctg
ttcccttgtgtggacgtacacggacgggtgaggaacaccatgtgttacgcccaacctatg
gatcacacctatcttcacgccttccggcgaaacaccaggaaaagtcagaagcttagacac
agccagtccacaaggcttcccacctacaaggaggcgattttccacaatgtggcagctgtc
aggagagcgtcaagtttggtgcatagaccctactcatatccggagctgccagtctatcag
agccccctgtcatatggaccagctgaattatgcaacatcttcccctgtatgggacatccc
agtgacagtgtatatggagggtatagggtacccacacacctacaggatgaccatctagtg
cctgttccaggcagcagggtggttcatagcagccctattgtgcccatgacatggggcaga
atttccagtttggaatcagaggtgtga
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