Pimephales promelas (fathead minnow): 120474696
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Entry
120474696 CDS
T08155
Symbol
sec24c
Name
(RefSeq) protein transport protein Sec24C isoform X1
KO
K14007
protein transport protein SEC24
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120474696 (sec24c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprm04131
]
120474696 (sec24c)
Membrane trafficking [BR:
pprm04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
120474696 (sec24c)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
120474696
NCBI-ProteinID:
XP_039521135
LinkDB
All DBs
Position
Unknown
AA seq
1263 aa
AA seq
DB search
MRVRDELRMNVNQQPHMASPYGQPQPGYQGYPQPGYGGGHVPSGYPAQYAPYNGPGSAYQ
QGPPQGYSPYASFPTKTLATNLVSDLSSSSPLDLGMRGPPTSGAPPVSGAQNYSQFGQGE
TQNGPPPMGAPPQRLPVSQPYTPAVVNLSGPQPPYDQQFGAPPVSMQQMTNQMASMQVGS
TAPSPAGPGYAPPSVSQAPISSAYTPAAPPTFSLASTAPTQPPPTEAMAQAPPRSYYGAP
PPAQQPFPNAAQPFSSTGPTQPQAPPPVSQQSFSQVPPVSQPPFSTALPPGPTQSYGGPL
PPTQPSFPRPPLPTSQLSNFPGGPPPTSTPSQLPGGMQPQPPVSQPSPYHSGPPPNTTGF
PPQVGAPPRPPLAGMQGPPPMASQGPPMAQANHVPPSQPGMPPSPINAALSGPPPQPGMQ
GYPPQQNGAFGQVRGPQPGYAGPYSGQPNYGAPPAAPAPAPAAPKRLDPDSIPSPQASDM
PPVQKTRHRIDPDAIPSPIQVIEDDKANKGSEPFTTGVRGQAPPLVTTKFQARDQGNASP
RYIRCTAYNMPCNADMAKQSQVPLAAVIKPLATLPPDESPPYLVDHGETGPIRCNRCKAY
MCPYMQFIEGGRRFQCGFCSCVTEVPPHYFQHLDHTGKRVDCYDRPELSMGSYEFVATVD
YCKNNKIPQPPAFIFLIDVSYNAVKNGMVGIVCQELKTLLDYLPRQNPDVESNIRVGFVT
YNKVLHFYNVKASLAQPQMMVVSDVADMFVPLLDGFLVNVSESRMVIESLLDQIPEMFAD
TRETETVFGPVIQAGLEALKAADCAGKLFVFHSSLPIAEAPGKLKNREDKKLVGTDKEKS
LFQPQVSFYNTLAKDCVVQGCCVDLFIFPNQYVDVATLGVVPTSTGGSIYKYTYFQASTD
QERFLNDLRRDVQKQVGFDAVMRVRTSTGIRATDFFGSFYMSNTTDVELAGLDCDKTVTV
EFRHDDKLSEETGALMQCAVLYTSCNGQRRLRIHNMAVNCCSQLADLYRNCETDTIINFF
VKYAYRSILSSPTKNVRDSLVNQCAQILACYRKNCASPSSAGQLILPECMKLLPVYLNCV
LKSDVLQPGADVSLDDRAYLRQLVSAMDVAESHVFFYPRLLPLQQLDVESMSLPVAVRDS
EERLSRGGVYLLENGLNIFLWVGVNAQQELLQNIFGTTAFSQIDPGMTSLPALDNPFSKR
LREIIESVRAQRSRYMKLMVVKQEDKLELIFKHFLVEDKSNNGGASYVDFLCHMHKEIRQ
LLS
NT seq
3792 nt
NT seq
+upstream
nt +downstream
nt
atgagagttagggatgaactgagaatgaatgtcaaccagcaacctcacatggcctctcct
tatgggcagcctcagcctgggtatcagggctaccctcagcctggctatgggggtggccac
gtgccatcgggatatccagctcagtacgcaccttataacgggccgggttctgcttaccaa
caaggtccaccgcaaggatattctccttatgcaagctttcccactaagactcttgcaaca
aacttagtctctgacctgtcctcctcctctcctcttgacctaggtatgagaggacccccc
acttcaggggcaccacctgtctcaggtgcccagaactattctcagtttgggcaaggagaa
actcaaaatggaccacctccaatgggtgctccgccacagaggcttccagtgtctcaacct
tacactccagctgtggtgaatctctctggtcctcagcccccgtacgaccagcagtttgga
gctccacctgtcagcatgcagcagatgaccaatcagatggccagcatgcaggttggctcc
actgcaccatcccctgcaggcccaggctatgcccctccctctgtatcccaggctcctatc
tcctctgcctacacacctgctgctcctcccactttctcactcgcctccactgctcccaca
cagcctccgcctactgaagctatggctcaggctccccctaggtcctactacggagctcca
cctcctgcccagcagcctttcccaaatgctgcccagcctttctcctccactggcccaact
caaccccaagccccaccacctgtttctcaacaatccttctctcaagttccacctgtctct
cagcctccgttttccacagccctgcctccaggtccaacccagtcatatggaggcccactt
cctccaacacagccctctttcccaagacctccgcttcccacctcccaactctccaatttc
cctggagggccaccacccacctcaactccatctcagctcccaggaggcatgcaaccccaa
ccaccagtttcccaaccctcaccttaccactcaggcccacctccaaacactactgggttt
ccaccacaagttggtgctccaccaaggcctccccttgctggaatgcaaggtcctcctcca
atggcatcacagggccctccaatggcacaggctaatcatgtacccccttcacaacctggc
atgccacctagtcctatcaatgctgccctgtcagggccaccaccacagcctggaatgcag
ggatatccccctcagcaaaatggtgctttcgggcaggtcagaggtcctcagcctggctat
gcaggaccgtattctgggcagccaaattatggagcgccacccgctgcacctgccccagca
ccagccgccccaaagaggcttgatcctgattctattccaagcccgcaagcctctgacatg
ccgcctgtgcagaaaacaagacatagaatagacccagatgcaatccccagtccaattcag
gttatcgaagatgataaagcaaacaagggaagtgaaccttttactacaggggtcagaggt
caagccccacctcttgtcaccactaaattccaagctagagatcaagggaatgcgagtcca
cgttacatccgttgtacagcctacaacatgccctgcaatgccgacatggcaaaacagtcc
caggtgcccctcgctgctgtcattaaacccctggctactctgcctccagatgagtcacca
ccatatctcgtggatcatggggaaacaggtcccattcgctgtaatcgctgtaaggcctac
atgtgcccgtacatgcagtttattgaaggtggtcgtcgtttccagtgtggcttctgcagc
tgtgtcaccgaggtgcctccccattacttccagcatctggatcacacagggaagagggtg
gactgctacgaccgaccggagctctcaatgggcagttatgagtttgtggctactgtggac
tactgtaagaacaacaagattcctcaaccgccagccttcatcttcctgattgacgtgtcc
tataatgctgtgaagaatggcatggtaggaatcgtatgccaggagctgaagacactgttg
gattacttgcctagacagaatcctgatgtggaatcaaacattcgagttggctttgtcacc
tacaataaagtgcttcatttctataacgtgaaggcctcccttgcccagccacagatgatg
gttgtgtcagatgtggctgacatgtttgtgcccctactggacggatttctggtcaatgtc
tcggagtcccggatggttattgagagtttgttggatcagattcctgagatgtttgctgac
acacgggaaactgagactgtgtttgggcctgttattcaggccggactggaagcgctcaag
gctgcagactgtgctggaaagctctttgttttccactcgtctcttccgattgctgaggct
ccaggcaaactgaagaacagggaggataagaaactagtgggcactgataaagagaagtca
ttattccagccacaagttagtttttacaacaccttagccaaggattgtgtggtgcagggt
tgctgtgtggaccttttcatctttcccaaccagtatgttgatgtagcaacgttaggggtg
gtccccacttcaacaggcggatccatctacaaatacacctacttccaggcttcgactgac
caggagcgtttcctcaatgacctgcggagagatgtgcagaagcaggtgggatttgatgca
gtgatgagggtccgcaccagcacaggtatccgggcaaccgacttctttggttccttctac
atgagcaacaccacagatgtagaactggcaggactagactgtgacaagacggttaccgtg
gagttcagacatgacgacaagctcagcgaggaaactggagctttaatgcagtgtgctgtt
ttgtacaccagctgcaatggtcagcgacggctccggatccataacatggcagtgaactgc
tgctctcagctggcagacctgtacaggaactgcgagactgacaccatcatcaactttttc
gtcaaatatgcatatcggagtatactcagcagtcctaccaagaatgtacgtgatagcctg
gtgaatcagtgtgcacagatcttagcctgttaccgcaagaattgtgccagtccatcttca
gcaggacagttgattttaccagaatgcatgaagctgctgcccgtgtatctgaactgtgtg
ttgaagagtgacgttctgcagcccggggcggacgtctctctggatgaccgggcctacctg
agacagctggtcagcgctatggatgtggccgaaagccatgtgttcttctatcctcggctc
cttccgctgcaacagctggatgttgagagcatgtctctgcctgtggcagtgagagactcg
gaggagagactgtctaggggaggagtgtacctcttagaaaacggattgaatattttcctt
tgggtgggggtcaatgcccagcaggagctgcttcagaacatctttggcacaactgccttc
agccagatagaccccggcatgacatctcttccggctttggataatcctttttcaaagaga
ctgagggagattattgagtctgtcagggcacagcgctcacgatacatgaagctcatggtg
gtgaaacaggaagacaagctggagctgattttcaagcacttcctggtggaggataagagc
aacaatggtggggcctcttatgtggacttcctgtgtcacatgcacaaggagattcgtcag
ctcctgagctag
DBGET
integrated database retrieval system
