Pimephales promelas (fathead minnow): 120474800 Help Entry 120474800         CDS       T08155                                  Name (RefSeq) collagen alpha-1(VII) chain-like   KO K16628   collagen type VII alpha Organism pprm  Pimephales promelas (fathead minnow) Pathway pprm04382   Cornified envelope formation Brite KEGG Orthology (KO) [BR:pprm00001]  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     120474800 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen fn3 VWA Kunitz_BPTI Interfer-bind DUF4992 Motif Other DBs NCBI-GeneID:  120474800 NCBI-ProteinID:  XP_039521353 LinkDB All DBs Position Unknown AA seq 2614 aa AA seqDB search MERSEQQVLRATTTGPTSIRLSWNLIQAARGYRLEWKAGERGRVQKQDFPQSTTNYELRN LQPSTEYIITLFTLYDGREEATFFSTKSTVEQSVGRVTNLRVVDSIGNIIRIGWTGVAGA TQYNIIILNTESNTEVNRRLPGNQSTFDLRDLIDGVRYAVSVTALVGSNEGEPATVYIKT EPPLRVTNLRVVGSNSRRVRIAWSGVTGATGFRVTWRQSNTPEEFRVLGGDITTYTIDGL QPDDSVVVGVAPVIDGKTGEVVSVSTRTSGSTGIVTGLRVVEATSTRILITWTLVNRATG YKITWRRSDGVEDSENVRADVASYAIDRLQEAASYQVLVSALFNSREGPAATVTARTDQT IVGRVTNLQVLEAQGEVVRVSWVGVQNATSYRILWKRTDGEEEQSQLVGGNVTSVDLRQL DEGAQYEVKVLALVRNREGPPVSVRVTTGGQRVTRVEGLRVLDSTPGGLRITWRAVSGAS SYQIYWRSSQGEPESSRLISGDATSYTLDGLRPGLSYTIRLSAVVNSEETEATSIRATTD ALPPVTGLSVTDSTENSVLLGWSPVIGATGYILRWTEEEDTGTGQSETLPGTATSYRVIG LRLGRLYRFTVQPTFQNQVGPETTVEERTVCVGGRLDVVFLVPASRDRSGLGARVLPLLA SSARSFTSIGPRDSQMGVVMYSEDSKVRFLLNRHSNSETLLRDILSIPFNDRPGNNIGRA MTYARQFLLSTPAGRRSGIPGVVVIIADEKSTDDLSKPAATVRADGVTVLAVGIGRADPT ELRLAVTDGSTQNLIFAQDTNQLYGLHPDLADLLCGLARGTGVTTGPCTVECPRGAKGEQ GQKGERGRDGVDGRKGEPGRDGLPGREGPRGPEGPPGQPGSGLGVRGEKGERGFPGLDGS PGVPGRSGAVGLPGSQGLPGVRGDPGEPGLVGPLGLKGEKGERGESGSAVGGGLPGRKGE PGIPGISGTPGRPGVDGAKGEAGPRGLPGQDGRPGLSGSPGLSIKGDKGSPGDRGPPGVG SGVAAKGDAGEPGSTGPPGPQGPRGLTGQKGAKGETGESTEGKPGPQGNTGDPGDRGPRG PPGEIGSKGDRGQTGAPGLDGAKGDRGLSGPAGEKGDKGLPGPAGPQGLRGLPGSNGLPG EKGTEGAKGEPGSSQGPGSFGRKGERGERGFAGPDGVKGDKGDAGLKGERGAPGAGEPGQ PGPKGDQGDRGLAGLSGKPGAKGSQGDSGERGEAGNPGSQGPMGPRGKDGLKGDKGEDGI SGESGLPGKPGERGLRGITGQPGQPGPKGDTGDPGEDGRNGTPGPSGLRGQKGEQGIQGP PGPSGDVTTGEKQLKGDRGEKGEAGDPGEHGAKGQKGEGGAPGPAGPSGPEGQRGLPGAR GDPGDRGSPGEKGERGVAGLDGRPGQDGKPSLPGAPGLRGDPGKQGDPGRDGLPGLRGPQ GPSGPPGPPGTDGTPGKAGEDGKPGLPGKAGEDGVPGEDGRKGDKGEQGAAGRDGRDGIK GDQGIGGLIGPQGPIGPPGVPGNVGPPGPVVYVKGEPAVPIPGPQGPPGTPGVPGVPGVA GARGERGLTGLKGDVGDPGEDGKPGTVADVKRAFSEFGIEIRELKLLVDDRSNLISKMPL AEGKKGDKGEVGPRGPAGADGARGVPGERGMKGEHGENGPPGPQGPPGRAIGERGPEGPP GQAGEPGKPGIPGVPGRAGELGEAGRHGDKGEKGDKGDRGQSGPAGLPGLVGPPGPKGDS ATTQSGLPGPRGLPGPQGIRGEPGAVGPPGSMGERGYTGARGEKGDKGVSGERGQDGSPG NQGDPGKQGQDGKPGLPGFPGVLGRPGNPGEPGIRGPTGPMGGNGPPGAPGVKGDQGEPG IGVQGPPGPQGNRGLPGPAGTPGAIGPQGPPGLPGQVGEGGKPGVPGRDGVPGKEGLPGL PGKQGIAGPIGPPGLKGEQGDSGPPGKSVTGPPGMKGEMGPPGQTLPGTIGERGLPGLSG PKGDKGPAGIKGERGAAGDPGEPGENGMRGPQGPKGFKGEAGVGMPGPPGQLGPIGLKGD PGLPGPPGPPGPRGLDGTPGLAGQRGEAGQPGPPGPQGERGLQGFIGKTGNPGTSGADGQ PGPTGTAGLPGLKGDKGEIGVGVPGLRGERGDLGPRGEEGRPGTDGERGPTGPSGSKGNR GDKGEQGPSGIKGEKGDTLLVGGPPGDKGVKGETGERGPKGGQGEKGAKGQEGPPGEQGL RGEPGERGSTGFQGARGPGGQKGEAGQPGVPGEAGTPGKDGLPGMRGEKGEVGHLGLRGL KGERGSKGLCGPSGQKGDKGDAGINGRPGLPGRKGEQGEVGSQGPTGSPGKEGLIGAKGD RGFDGVLGPKGTQGDKGERGASGIPGPPGPRGVDGPSGLTGPQGPAGGKGPEGLQGQKGE RGPAGPAMVGPRGIPGIPGERGEQGEMGSDGPKGDRGEPGMTEDEIRGYVRTEMNLHCAC GGVQDVQIPVGVQTYRSSSSTSPGRSLTRGDEEGPKLRVVMNTNDPDYEHIYSIETYDDD APVVEISDYDTTVNKSQSQTVSVDSLKAERTKREVKSEDSCILPMEEGDCSRFTLRWYFN SQVGACRPFIYSGCGGNANRYLQKEECEKLCLQQ NT seq 7845 nt NT seq  +upstreamnt  +downstreamnt atggagcgctccgagcaacaagtcctgagagcaacgacaaccggacccaccagcatcaga ttaagctggaacctcatacaggccgccagaggctaccgactggaatggaaagccggagag agaggcagagttcagaagcaagatttcccacaaagcaccaccaactatgagctcagaaat ctgcagccgagcaccgagtacatcataactctgtttacactctacgatgggcgagaggaa gccactttcttttcaaccaaatcaacagtagagcagtcagtcggtcgtgtcacaaacctg agggtggtggattccattggaaacattatacgaataggatggacaggagtcgctggggca acgcagtacaacatcatcatacttaatacggaatcaaacacagaggtgaacagaagactt cctgggaatcagtccacttttgacctacgggacctcattgacggtgtgcgctacgctgtc agtgtgacggcactagttggatccaatgaaggggaaccagcaacagtgtacattaaaaca gaaccaccactgagggtgaccaacttgcgggtagttggcagcaacagtcgacgagtcagg attgcatggagtggtgttactggggcgacaggtttccgggttacctggagacaaagcaat actccagaggaattccgtgtcttaggtggcgatatcactacctacactatagatgggctg cagccagatgattctgttgttgtgggtgttgctccagtgattgatgggaaaactggagaa gtggtttctgtgtctactagaaccagtggttctactggaatagtcacagggctacgagtc gttgaagcaacatccacaaggatactaataacctggactctggtgaatagagcaacaggc tataaaatcacctggcggcgtagtgatggagtggaagactctgagaatgtgcgcgctgat gtggcttcctatgccattgatagactccaggaagctgcatcctaccaagtattagtctcc gccctttttaactcacgagaaggacctgctgccactgtgactgcaaggacagatcagacc atagtgggtcgcgtcaccaatttacaggtgctggaggcccaaggggaggttgttcgagtc agctgggttggagttcaaaatgcgacatcatacagaattctctggaagaggacagatggt gaagaggagcagagtcagctggttggtgggaacgtaacatcagtggacctgaggcaattg gatgaaggagcacagtacgaggttaaggttttggcactagtccggaacagagagggccca cctgtctctgtcagagtcaccacggggggacagagggtgacaagagtagagggtttgcgt gttttggattcgaccccaggggggctccgtataacctggagagcagtgagtggagccagc tcatatcaaatctattggaggtcttcacaaggtgagcctgaatcaagtcgtctgattagt ggtgatgcaacttcgtatacccttgatggactgcgtcctggtctaagctacactataagg ttgtctgctgtggtgaacagtgaagagactgaagctacctctatcagagcaaccactgat gccctaccacccgtgactggtttgagtgtgacagacagtactgagaattcagtcctttta ggctggtcaccagtaattggagctacaggctatattttacgctggacagaggaagaggac acaggaacgggtcagtctgaaacgctgcccggaacagccacctcgtaccgtgtgatcggt ctacgactgggccgtctttaccgtttcactgtgcaacccaccttccaaaaccaggttgga cctgagaccaccgtggaggaacgaacagtgtgtgttggaggccgtttggatgtggtcttc cttgttcctgcgtctcgtgatcgctctggcctgggagcacgtgtgttgcctctgttagct agttctgctagatccttcacctccatcggtcccagagactctcagatgggggtggtgatg tacagtgaagattcaaaagtgcgcttcctcctcaatcgtcatagcaacagtgagaccctt ctgcgggatattttgtccatcccattcaatgacagaccaggaaataatataggccgggca atgacatacgcgcgtcagtttttgctaagcactccagcaggtcgaaggtctggcattcct ggggtggttgttattatcgctgacgagaagtcaaccgatgatcttagcaaacctgctgcc actgttagagctgatggtgtgacggtgttggcggtaggaattggacgtgcagaccctaca gagctgcgtttggcagtgactgatggcagcactcagaatctgatctttgctcaagacaca aatcaactctatggtctccaccccgacctggcagacctcctctgtggccttgcacggggg accggtgtcacgacagggccttgtactgtagagtgccccagaggtgctaaaggggaacag ggtcagaagggtgaaagaggcagagatggggtagatggaaggaaaggcgagcctggtcgt gatggtttaccgggtcgtgagggccccagaggaccagaggggccaccaggtcaaccaggc agtggtctgggagtgagaggagagaaaggcgagagaggttttccaggattggacggcagt ccaggtgttccaggtcgttctggtgcagttggactaccaggcagtcagggattaccaggt gttagaggagaccctggagaaccaggtcttgtggggcctctgggattgaagggagagaaa ggtgaaaggggggaatctggatctgctgttggaggaggtttaccaggccgtaaaggagag ccaggaatcccagggatctctggcactcctggtcgcccaggtgtggatggggcaaaagga gaggcaggtccacgaggtctgcctggacaggatggtcgccctgggttgtcaggctctcca gggctttctattaagggtgacaaaggcagccctggtgacaggggtcctcccggagtgggc agtggggttgctgctaaaggagatgccggtgaacccggaagtactggaccgcctggtcca cagggcccacgaggactgactggacaaaaaggagctaaaggagaaactggagagagtact gagggtaaaccaggaccccaaggaaacaccggagaccctggcgatcggggtccccgggga cctccgggtgaaatcggaagtaagggtgaccgaggacagactggagctcctggtttagat ggagccaagggtgaccgaggactttcaggtccagcaggagaaaagggagataaaggttta ccaggccccgctggacctcaaggactgaggggtttgccagggagcaatggccttcctgga gagaagggcacagagggtgcaaaaggggaacccggaagcagtcagggtccaggttcattt gggagaaaaggagagcggggtgaaaggggctttgcaggtcctgatggtgttaaaggtgat aaaggagatgcaggactaaaaggggaaaggggtgcccctggagcaggagagcccggccaa cccggacctaaaggggaccagggcgatcggggtctcgctggattgtctggaaaacccggt gcgaagggcagtcaaggtgactcaggggagagaggggaggcgggcaatcctggttcgcag ggccccatgggccccagagggaaagatggactaaaaggagacaaaggagaagatggtatt tcaggagaatcagggttgccaggtaaaccaggggagagaggtctaagaggaataacaggt caaccaggtcaacctgggccaaaaggagacacgggtgatccgggggaagatggacgaaat ggtaccccaggccccagcggactaagaggccaaaagggcgagcagggaatacaaggtccc cctgggccgtctggagatgtgacaactggagagaaacagctaaaaggtgacagaggagaa aagggagaggcaggtgacccaggggagcatggggctaaaggtcaaaagggtgaaggagga gctccaggccctgcaggaccaagcggacctgaggggcagcgtggtctaccaggagccaga ggtgacccaggtgataggggcagtccaggagagaagggagaaagaggagtggctggattg gatggacgacccgggcaggatgggaaacctagtcttcctggagctcccggattacggggt gacccaggaaaacaaggagatcctgggcgagatggattgccaggactaagagggcctcag gggccttcaggaccacctggtcccccaggaactgatggcacacctggtaaagcaggggag gatgggaaaccaggactgcctggaaaagctggtgaggacggcgtgccaggagaggatggt cgaaagggagacaaaggagagcagggggccgcgggaagagacggtcgggatgggataaaa ggtgatcagggtattggaggacttattggcccgcaaggtcccattggaccccccggagtt cctggaaacgtcggaccaccaggacctgtggtctatgttaaaggggagccggcagtgcct attccagggccgcagggtcctccaggaacccctggtgtacctggagttccaggagttgct ggagcaagaggggaaagaggtctaacaggcttgaaaggagacgtgggtgatccaggagag gatggcaaaccaggaactgtagcagatgtgaagagagcgttctcagaatttggcattgag atccgagaactgaaactattagttgatgaccgaagcaatctgatatcaaagatgccactg gcggagggaaagaagggcgataaaggagaggtcggacctagaggccctgcgggtgcagat ggtgcacgaggtgttccaggtgagcgaggtatgaaaggagagcatggcgagaatgggcca cctggcccacagggtcctccaggcagggcaattggagagagaggcccagagggtccgcca ggacaggcaggtgaacccggaaagccaggaataccaggagtaccaggacgagccggtgag cttggagaagccggcagacatggggacaagggagagaaaggggataaaggagacaggggg caaagtggtccggctggattgcctggcctagtagggcctccaggaccaaagggcgattct gccaccactcagagtggtttgcctggtccaaggggtctaccaggcccccaaggtatcaga ggtgagcctggtgcggtagggcctccaggatctatgggagagcggggctacacaggtgct cgtggtgagaaaggagacaaaggagtcagtggagagcgtggacaagatggctccccggga aatcaaggagatccaggaaaacaaggacaggatgggaaaccgggcttgcctgggttccca ggagtgctgggcagaccggggaatccaggagaaccaggaataagaggaccaactggtccg atgggtggaaatggacccccaggggctcctggtgtgaagggtgaccaaggagaaccaggc attggagttcaaggccctcctggacctcagggcaacagagggttacctggacctgcaggc actcctggagccatagggccacaaggacccccagggcttccaggacaagtgggagagggg ggcaagcctggtgtcccagggagagatggtgttccagggaaagagggcctgccaggatta cctgggaaacagggtattgctggacccattggccccccaggacttaaaggagagcaaggt gacagcggtccaccaggaaagtctgtcaccggaccccctggaatgaagggtgagatggga cctcctggtcagacattgccaggcactattggagaaagaggccttcctggattatcaggc ccaaagggagacaaggggccagcggggataaaaggagaaagaggggctgcgggtgatcct ggagaacctggggaaaatggaatgagaggcccacaagggcccaaaggattcaaaggtgag gcaggcgtggggatgcctgggcctcctggacaacttggacccatcggcttaaagggtgac cctggcttgccaggtcctccaggccctcctggaccacgtggattggatgggacaccagga ctggcaggacagagaggtgaagcaggtcagccaggaccccctggaccacaaggagagagg ggtctacaaggatttataggcaaaacaggaaacccaggaacatctggagctgatggacaa ccaggacccactggtactgcgggccttccaggactcaagggcgataagggtgaaattgga gttggagtgccaggtctaagaggagagcgaggagacctcgggcctcggggagaagaaggt cggcctggaacagatggagagagaggccctactggtccttctggcagcaaagggaacaga ggagataagggcgagcaaggtccttctggaattaaaggcgaaaagggagatactctgctg gtgggagggcctccaggagacaaaggagtaaaaggagaaactggggagcgaggacctaaa ggtggacagggtgaaaagggtgcaaaaggacaggaaggaccaccaggagaacagggtctg agaggtgagccaggagagagaggttccactggtttccaaggagcccgtggtcctggcggt cagaagggagaagcagggcagccaggtgtcccaggtgaagcgggaacacctggtaaagat ggtctgcctggcatgagaggagagaagggagaggttgggcacctaggtctcagaggcctc aagggagaacgaggctccaaggggctatgtggaccaagcggacaaaagggagacaaggga gatgctgggattaatggtagaccaggattgccagggaggaaaggagagcagggtgaagtc gggtctcaaggtcccacaggaagtccagggaaggaggggctcattggcgccaagggtgac agaggctttgatggagttttggggccaaagggaacacaaggagacaaaggcgaacggggc gcatctggtatcccaggccctcctggtccgagaggtgtggatggaccctccggtctaaca ggccctcaaggacctgctggaggtaaaggtccagagggtctgcaaggacaaaagggagaa agaggtcctgcaggcccggctatggttggtccacgtggcataccagggatcccaggagag agaggagaacagggtgagatgggctctgatggacctaaaggagacagaggagaaccaggc atgacggaggatgaaattcggggttatgttcgaactgagatgaacctgcattgtgcttgt ggaggtgttcaggacgttcagatacctgtaggagtgcagacttaccgaagtagctcctcc acgtcccctgggcgctcactaacccgaggggacgaggagggtccaaagctgcgtgtggtg atgaacacaaatgatccagactatgagcacatttactctatagagacctatgatgatgac gctccagtggtggagatttctgactatgacaccactgttaataaaagccagagtcaaaca gtctctgttgattcattaaaagctgaaaggacaaaaagagaggtgaaaagtgaagactct tgcatcttgcccatggaagagggtgactgttcccggtttactctgcgctggtactttaat tctcaggtgggcgcctgtagaccttttatctacagcggctgtggagggaacgctaatcgc tatttacagaaggaagagtgtgagaaactctgtctgcaacagtaa

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