Pimephales promelas (fathead minnow): 120475034
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Entry
120475034 CDS
T08155
Symbol
arhgef6
Name
(RefSeq) rho guanine nucleotide exchange factor 6 isoform X1
KO
K05729
Rho guanine nucleotide exchange factor 6
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04518
Integrin signaling
pprm04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04518 Integrin signaling
120475034 (arhgef6)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
120475034 (arhgef6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprm04131
]
120475034 (arhgef6)
Membrane trafficking [BR:
pprm04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
120475034 (arhgef6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF67_u2
betaPIX_CC
RhoGEF
SH3_2
SH3_1
CH
RhoGEF67_u1
SH3_9
PH
CENP-Q
DUF8293
Mis12
Motif
Other DBs
NCBI-GeneID:
120475034
NCBI-ProteinID:
XP_039521677
LinkDB
All DBs
Position
Unknown
AA seq
802 aa
AA seq
DB search
MNPEEQTVTWLITLGVLNSPKKNIADPEEFLKTSLRDGVVLCKLMERLLPGAILKYSTEP
RCEAACIANIREFLKGCQSLKVEGFDPESLYTGENFNKVLSTLSAINIATQDCTPNRSCP
QSSASPTSLSTPSQAVPSLKSSRSLRRQSKAVEMSENGGGGQLMVKARFNFKQNNEDELS
FSKGELIHVTRQEEGGWWEGNLNGKTGWFPSNYVREVKPCEKPISPKSIKGFDVPQLTKN
YYNVVVQDILEHEREFVKELQTVLGCYLRPLQASDKLSSVDCSSLNGNLEDVLTFQLGLC
LALEECSKMPEGQQRIGSCYLNLMCQIRTLYLSYCSSHPSAVCVLTDHSEELDKFMESQG
ASAPGILTLTTSLSKPFMRLDKYPTLLQELERHVEEAHPDYNDILKATVAFKNLVTQCQD
LRKRKNLELQILSEPVRGWEGDSMKSLGQVVYMSQVHMQSSTNEEKEEKYFMLFPNVLVM
LSASPRMSGFIYQGRLPLAGTTVTKHIEDADTGHFAFEITGGTIDHIMVFCSSLQEQLEW
LEHLHAYTKEGSPVGTMLKVIRTHCQCFFVFYITPNDAFLQVNRYFLVLQSVEGKPLTVT
GALSHHLHSFGTPVANRGPLEPPKVTKPWSLSCLRPAPPLKPSAALSYKEDSSKSPRPIK
KFLPKRKTERKQSDDELLIRKSTVALEEDAQILKVIEAYCTGASLHQSTTAVRKECIPQV
LLPEEEKIIVEEIKSNGQTIIEEKSLVDAVYALKDEVHELKKENKLMKQCLEEEQKSRKE
LERVVKKLAKQKNDCSWEEGGH
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccgaggagcagactgttacgtggctaataacattaggagttctcaattcaccc
aaaaagaatatcgctgatccagaggaatttctgaaaacatctctcagagatggggtcgtc
ctgtgtaagcttatggagcggctgctgcctggagccatcctaaagtattcaactgaaccc
agatgcgaagcggcctgcattgcaaacattcgggagtttctaaaaggatgccagtctcta
aaggttgagggctttgatccagagagcttatatactggggaaaacttcaacaaggttctg
tcaacactctcagcaataaacatcgccactcaagattgtacccctaatagatcatgtcca
cagtccagtgcctctcctactagcctgtcaaccccttcacaagctgttcccagcttgaag
tccagcaggtccttacggaggcagtcaaaagcagtggaaatgtcggagaatggaggcggt
gggcagctgatggtaaaggcccgcttcaattttaagcagaacaatgaggacgaactgtct
ttcagcaagggcgagctgatccatgtcactcgccaggaggaaggtggatggtgggaggga
aaccttaatggcaaaaccggctggttcccaagcaactatgtccgagaggtcaagccttgt
gagaaaccaatatctccgaaatcgataaaaggatttgacgttcctcagctgacaaaaaat
tattacaatgtggtggtgcaagacatcttggagcatgagagagagtttgtcaaagaactg
cagacggtacttggctgctacctgcggcctctacaggccagcgacaagctctctagtgtg
gactgctccagtctaaatgggaatttagaggacgtcctcactttccaacttggactgtgt
cttgccttagaggagtgctccaagatgccagagggccagcagcggattggtagttgttac
ctgaacctgatgtgtcagatcagaacactgtacttgtcctactgctccagtcatccctct
gcagtgtgtgtgctgaccgatcacagtgaggagctggacaagttcatggagagtcagggt
gccagtgctcctggtattctgaccctgaccaccagcctgagcaaacccttcatgaggctc
gacaagtatcccaccctcctgcaggaacttgagcgacatgtggaggaagcgcatccagat
tacaatgacattctcaaagcaacggttgcatttaaaaatcttgtgactcagtgtcaagat
ctgcgaaaaagaaagaacctagagttgcagatcttgtcagagccggtgcggggctgggag
ggggacagcatgaagtcactgggtcaggtggtctacatgtcacaggtccacatgcagagc
agcacaaatgaggaaaaagaagagaagtacttcatgctgtttcctaatgtgttagtcatg
ctgtctgccagcccaagaatgagtggtttcatttaccaaggacgtctgcccctagcagga
accactgtaaccaaacacatagaagatgcagacacaggccattttgccttcgagatcaca
ggagggacaatagatcacatcatggtgttctgtagtagtttacaggagcagctggagtgg
ttagaacatcttcatgcttacaccaaggaaggaagtccagttggaacaatgttgaaggta
ataagaacccattgtcaatgtttttttgtgttttacatcactcccaatgatgcgttccta
caggtgaatcgttattttcttgttttgcagagtgttgagggtaagcctctaaccgtgact
ggtgctttgtcccaccacttgcacagtttcggtactcctgtggctaaccgaggtcctctc
gaaccccccaaggtcaccaagccctggtccttaagctgcctgaggccagcgccacccctc
aagccctccgctgccctaagctataaagaggactctagtaaaagccccagaccaatcaag
aagttcctcccaaagagaaaaacggagagaaaacaatcagatgatgagttgctgattaga
aaaagcacagtagctctagaggaggatgcccagatccttaaagtgattgaggcctattgc
actggagccagcctccaccaatccaccacagctgtgcgtaaggagtgcatcccccaggtc
ctgcttccagaagaagagaagatcattgttgaggagatcaagagcaatggccagacgatc
atagaggagaaaagtcttgttgatgcggtttatgctttgaaagatgaagtccatgaatta
aaaaaggagaataaattgatgaagcagtgtctggaagaggaacagaagtcccgtaaggag
ctggagcgtgtagtcaagaagttggccaagcaaaagaatgactgttcctgggaggaagga
ggtcactaa
DBGET
integrated database retrieval system
