Pimephales promelas (fathead minnow): 120475036
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Entry
120475036 CDS
T08155
Symbol
abcd1
Name
(RefSeq) ATP-binding cassette sub-family D member 1 isoform X1
KO
K05675
ATP-binding cassette, subfamily D (ALD), member 1 [EC:
7.6.2.4
]
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm02010
ABC transporters
pprm04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
120475036 (abcd1)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
120475036 (abcd1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pprm02000
]
120475036 (abcd1)
Enzymes [BR:
pprm01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.4 ABC-type fatty-acyl-CoA transporter
120475036 (abcd1)
Transporters [BR:
pprm02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD1 subgroup
120475036 (abcd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_21
Adeno_IVa2
AAA_23
Rad17
AAA_29
SMC_N
ORC-CDC6-like
Mg_chelatase
Motif
Other DBs
NCBI-GeneID:
120475036
NCBI-ProteinID:
XP_039521686
LinkDB
All DBs
Position
Unknown
AA seq
766 aa
AA seq
DB search
MSVYSKLPSQLKNPLVKKTILVLVALYGAKKLSPYVYGRLKGRTSKQVKGADLVTSNGES
QKVEASRKKKTSPGVNREFFERLIRLLKILFPRLFCKELGLLGFHSLALISRTFLSIYVA
NLDGQIVKTIVKKDPRAFVVELTKWLLIAIPATFVNSAIRYLEGQLTLAFRTRLVTHAYM
LYFNDQTYYRVSNMDGRLANPDQSLTEDVVMFAASVAHLYSNLTKPILDVVLTFYTLIKI
GESKGANTTWPSVIAGIVVALTAKVLRMFSPRFGKLVAEEARRKGDLRYMHSRIIANSEE
IAFYGGHKIEMFQLQRSYTALSEQINLILFKRLWYVMLEQFLMKYLWSASGLVMVAVPII
TATGYSKYDSEDVKQAALVMKEEDLVSERTQAFTTARNLLNAAADAVERIMVSYKEVTEL
AGYTARVYEMFEVFEEVRAGVYRRSATEVKPEETGAAQMVTHGTRVEGPLQIRGQVIDVE
QGIKCENLPIITPTGDVVVSSLNIKVEEGMHLLITGPNGCGKSSLFRILSGLWPVYSGVL
YKPSPEHMFYIPQRPYMSVGTLRDQVIYPHSVQDMQEKGVSDLQLEEILKTVNLCYILER
EGGWDALSDWKDVLSGGEKQRMGMARMFYHKPQYALLDECTSAVSIDVEGKIFEAAKDAG
IALLSITHRPSLWKYHSHLLQFDGEGGWRFEKLDASTRISLQDEKLRLETQLSGIPKMQQ
RLVELCRILGEDSSLPNPGDVEEDDKMEEEEDRDVVAGGKEKDLME
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgtactcaaagcttccctcccagctgaaaaacccccttgtgaaaaagaccatt
ctcgttcttgttgcgctgtatggggcgaagaaactttccccttacgtttatggcaggctc
aaaggaagaactagtaaacaggttaagggtgccgacctggtgacctccaatggagaatct
caaaaagtggaagcctcaaggaaaaagaaaacctccccgggcgtgaaccgtgaattcttc
gagaggttgattcgtctcttgaaaatcctctttcctcggcttttctgcaaagaacttgga
ctgctcggtttccactctctagccctcatttcacgcacctttctctccatctatgtagcc
aatttggatgggcaaatagtgaaaaccattgtgaagaaagaccccagggcttttgtggtg
gagttaaccaagtggctgctcatcgccattccggccacgtttgtgaacagtgccatccgt
tacctggagggtcagctcaccctcgccttccgcacccggctggtcacccatgcctacatg
ctctatttcaacgatcagacgtactaccgtgtcagcaacatggacggcaggttggcaaac
cccgatcagtccttgactgaagatgtggtgatgtttgctgcctctgtggctcatctgtac
tctaacctgaccaaaccaatcctcgacgtagtgttgaccttttacacgcttattaaaata
ggtgagtcgaaaggtgccaacaccacttggccctccgtcatagctggcatcgtggtggca
cttactgccaaggtcctgagaatgttctccccacgctttggtaaacttgtggccgaggaa
gccaggaggaaaggcgaccttagatacatgcattctcgcatcatcgccaattcagaggag
attgccttctatggaggacataagatcgagatgtttcagctgcagcggagctacacggcg
ctgtccgagcagattaacctgatcctgttcaagaggctgtggtatgtcatgctggaacag
ttcctgatgaagtatctctggagcgcatcaggcctggtcatggtcgctgtgcccatcatc
actgccaccggatactcgaaatatgattcagaggatgtgaaacaggctgccctggtgatg
aaggaggaggacttggtgagcgagcgcacacaggctttcacaacggcccgaaaccttcta
aacgctgcagctgatgctgtggagaggatcatggtctcctacaaagaggtcacagaactg
gctggatataccgctcgtgtgtatgagatgttcgaggtgtttgaggaagtgcgtgccggg
gtgtaccgccgttcggccacagaggtgaagccagaagagacaggagcagctcagatggtg
acacatggcacgagagtggagggaccgctgcagataagaggtcaggtgattgatgtggaa
cagggtattaaatgtgaaaacctgccaataataactcctacaggggatgtggtggtttcc
agcctgaacatcaaggttgaagaaggcatgcatctgctgatcacggggcccaacggttgt
ggaaaaagctctctgttcaggatcctgagtggcctctggcccgtctacagtggagtgctc
tataagccgtcacccgagcacatgttttacatacctcaaaggccttatatgtcggtggga
acgctgagagatcaggtcatctatcctcactctgttcaggatatgcaagagaagggcgtt
tctgaccttcagctggaggaaatcctcaaaactgtgaacctctgctacatcctggagaga
gagggaggttgggacgcactgagcgactggaaggatgtgttgtctggaggagagaagcag
cggatgggcatggccaggatgttttaccataagcctcaatatgccctcctagacgagtgt
acgagtgctgtgagtattgatgtggagggcaaaatctttgaagctgcaaaggatgctggg
attgcgcttctctctattacacaccgtccttctctctggaagtaccactcccacctgctg
cagttcgacggtgagggcggctggcgctttgagaagttggacgcctccacgcgtatttcc
ctgcaggacgagaagctccgactcgagacccagctctcgggaattcccaagatgcaacag
cggctggtagagctgtgccgcattctgggggaggacagcagcctgccgaacccaggggac
gtggaggaggacgacaagatggaggaggaggaggacagagatgtagtggctggtggaaaa
gagaaagaccttatggagtga
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integrated database retrieval system
