Pimephales promelas (fathead minnow): 120475089
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Entry
120475089 CDS
T08155
Symbol
cxxc1a
Name
(RefSeq) CXXC-type zinc finger protein 1a isoform X1
KO
K14960
COMPASS component SPP1
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120475089 (cxxc1a)
03036 Chromosome and associated proteins [BR:
pprm03036
]
120475089 (cxxc1a)
Transcription factors [BR:
pprm03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
120475089 (cxxc1a)
Chromosome and associated proteins [BR:
pprm03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
120475089 (cxxc1a)
COMPASS/SET1 complex (yeast)
120475089 (cxxc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CpG_bind_C
zf-CXXC
PHD
PHD_5
PHD_ash2p_like
Motif
Other DBs
NCBI-GeneID:
120475089
NCBI-ProteinID:
XP_039521758
LinkDB
All DBs
Position
Unknown
AA seq
585 aa
AA seq
DB search
MDSDMSDFEKPPKPGMSLSQSNTPVYCICRKPDINCFMIGCESCSEWFHGDCINISEKTA
KTIHVWYCERCRSKNNSLEIKYRPKKSREKDSEADGTDYQPDTPDFKSDGRRGSRIKRSA
RMCGECEACMRTEDCGLCDFCKDMKKFGGPNKIRQKCRLRQCEVRARVAPPVNTSSEEKM
MSLKEKMLRVKDEEYSMSKGRDYQDGPMSEDYSENELELYQQYCAGQYGEHSTGWNSDDD
DGSYADSALRKRAVKVKHVKRREKRSEKKKEENKPRKHKPKQKHRDRVRHSERPEVRDSG
GARQCLGPGCVEAARASSKYCSDDCGMKLAANRIYEILPQRIQQWQQSPCIAEEQGKKLL
ERIRREQQSARLRLTEMEKRFHELEGIIAKAKQQVVQYDEEANEGDDDTDLQIFCVSCSH
PVNPKVALRHMERCYAKYESQTSFGSMYPTRIDGATRLFCDVYNPQSKTYCKRLQVLCPE
HSRDPKVPADEVCGCPLVRDVFEPTGEYCRVSKRKCNKHYCWEKLRRAEVDLERVRVWYK
LDELFEQERNVRLAMTNRAGLMALMLHQTIQHDPITPDLRTSKDR
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggacagcgacatgtcagactttgaaaaacctcccaaacccgggatgagtctaagccag
agcaacacgcctgtttattgcatttgtcgcaaaccagacatcaactgcttcatgattggt
tgtgaaagctgcagtgagtggtttcatggagactgcattaatatttctgagaagacggcc
aaaaccatccacgtgtggtactgtgaaaggtgtcgaagtaaaaataattccttggagatc
aaataccgtcccaaaaaaagccgtgagaaagattcagaggcagacgggaccgattaccag
cccgacacaccggatttcaaatcagatggacggcgagggtcacggattaagcgctccgct
cgcatgtgtggagaatgtgaagcctgcatgcgcacagaggactgtggactgtgcgacttc
tgtaaagacatgaagaagtttggcggcccgaataagatcaggcagaaatgccgactgagg
cagtgtgaagtgcgggctagggttgccccgccagtaaacacatcatcagaggaaaagatg
atgtcgttgaaagagaaaatgttgcgagtgaaggatgaagagtactccatgtctaagggc
agagactatcaagacggcccaatgtctgaagactacagtgagaatgagctggagctttat
caacagtactgcgctgggcagtatggagaacacagcacgggttggaacagtgatgatgat
gatggttcatatgctgattcggctctgagaaagagagctgttaaggtcaagcacgttaaa
agaagagaaaagcgatctgaaaaaaagaaagaggagaataagcctcggaagcacaaaccc
aaacagaagcaccgagaccgggtgagacacagcgagcggccagaggttcgagacagtgga
ggagcaagacagtgcctcgggcccggatgtgtcgaagctgcacgcgccagctccaaatac
tgctctgatgactgcggcatgaagctcgctgccaatcgaatctatgagatccttccccag
cgtatccagcagtggcagcagagcccgtgcattgcagaagaacagggcaagaaacttctg
gagcgaatccgccgtgagcaacagtcggctcgcttgcgactcacggagatggaaaaacgg
ttccacgagctggagggtatcatcgctaaggccaaacagcaggtcgtacagtacgacgaa
gaggccaacgagggcgatgacgacactgatttgcaaatcttctgtgtgtcctgcagtcac
ccagttaaccccaaggtggcgctgcgtcacatggaaaggtgctatgccaagtatgagagt
cagacatcatttggctccatgtaccccacacgcatagatggcgctacacggctcttctgt
gatgtttacaatccacagagcaaaacctactgtaagagactgcaggttctctgtccagag
cattcaagagaccccaaggttcctgcggacgaggtctgtgggtgtccactggttcgtgat
gtgttcgaacccactggagaatactgcagggtgtccaaacgcaagtgtaacaaacactac
tgctgggagaaactccgcagggccgaagtggacctggagcgagtcagagtgtggtacaaa
ttggatgaattgtttgagcaggagcgcaatgtaagattggccatgacgaatcgtgcaggt
ctcatggccctcatgctgcaccagacaattcaacacgacccaattaccccagacctgaga
accagcaaggacagataa
DBGET
integrated database retrieval system
