Pimephales promelas (fathead minnow): 120475231
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Entry
120475231 CDS
T08155
Symbol
syngap1a
Name
(RefSeq) ras/Rap GTPase-activating protein SynGAP
KO
K17631
Ras/Rap GTPase-activating protein SynGAP
Organism
pprm
Pimephales promelas (fathead minnow)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DAB2P_C
RasGAP
C2
PH
PH_2
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
120475231
NCBI-ProteinID:
XP_039521836
LinkDB
All DBs
Position
Unknown
AA seq
1150 aa
AA seq
DB search
MQSFKESHSHESLLSPSSAAEALDLTLDEDAVIKPVHSSILGQEYCFEVTTASGTKCFAC
RSAAERDKWIENLQRAIKPNKDNSRRVDNVLKLWIIEARDLPAKKRYYCELCLDDMLYAR
TTSKPRTDTVFWGEHFEFNNLPAIRSLRLHLYKETDKKRRKEKSTYLGLVSIPIPSLTGR
QFVEQWYPVLQPSALAKGSGGGKIINASLRLKSRYQSMNILPMELYKEFAEYVTNNYRTL
CGVLEPLLSAKSKEEVACALVHILQSTGKAKDFLSDMAMTEVDRFMDREHLIFRENTLAT
KAIEEFLKLIAHRYLKDTIGEFIRALYESEENCEVDPMRTPPSVLSDHQANLRMCCELAL
CKIINSHCVFPRELKEVFASWRVRCAERGREDIADRLISSSLFLRFLCPAIMSPSLFNMT
QEYPSERTSRTLTLIAKVVQSLASFSKFSGKEDYLGFMNEFLEMEWGSMQQFLYEISNLE
CVSNAGAFEGYIDLGRELSILHSLLWEVMAQLSKDAILKLGPLPRLLNDISMALRNPQLH
RQASHQPPDRHQSRPAFSRLNTNDFQSLMMRDLNSSIDISRLPSPTGTGVLSHPGMAAFS
DRDPRGNKEMFYVTRPPLARSSPAYCTSSSDITEPDPKVLSVNKSVSMMDLQDSRINSVS
NLHSVNDLLNSSQGSLAGLGFGPLGGAPLRAGGRVSAGSGGSSMSGGLRLSHSGLTTDSL
SQQQQQQAAAMNVPLSFQNPLFHLASDGPQYHTPPHGPAAPPPLLLAPEPENGHVGYGVP
SFGHSGFSRSEDLSALRNQNSLVQPNIVHSHSYSDDFTRHNQADYARRQLSLQVQENLQQ
QVLMGIAAQTATGTGTPASLATPPTTIHPARQASMGPPPPQRMKPQPPHQLSVSSAANST
PPKTRPQSGNLLQSPESSYGGRQLPRQQLSVKDSPAPGLPHQSSTAAESPAPQGGANDSA
ENTPSGQSAKASQQTNQQHLLKPGANKQGSKSPSTLNPPTAASERTVAWVSNMPHLSADI
ESLRVDREEFKLKEHSKSMDESRLDRVREYEEEIHSLKERLLMSHRKLEEYERRLQSQEH
QTSKILLQYQSRLDDSERRLRQQQAQKDSQIKGIINRLMAVEDELRGSGMPDLKTRLFTE
QPIYGAHSGT
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgcagagctttaaggagtcgcactcgcacgagtctctgctgtctcccagcagcgcggcc
gaggcgctggacctcacgctggacgaggacgccgtcatcaagcccgtgcactccagcatc
ctcggccaggagtactgcttcgaggtgacgacggcgtccggcaccaagtgtttcgcgtgt
cgctccgccgccgagagggacaagtggatcgagaacctgcagcgggccatcaaacccaac
aaggataacagccgccgtgtggataacgtgctgaagctatggatcatcgaggcgcgcgac
ctgccggctaagaagcgctactactgcgagctgtgtctggacgacatgctgtacgcgcgc
accactagcaaaccgcgcaccgacaccgtgttctggggcgaacacttcgagttcaacaac
ctgccggccatccggagcctgagactgcacctgtacaaggagaccgacaagaagaggcgg
aaggagaagagtacatatctgggtctggtcagcatcccgatccccagcctcacgggccgc
cagttcgtggagcagtggtacccggtgctccagcccagcgctctggctaaaggctccggc
ggcggcaagatcatcaacgcttcgctgcgactcaagtctcgataccagagcatgaacatc
ctgcccatggagctctacaaggagtttgcagagtacgtgaccaacaactacaggacgctg
tgtggagttctggagccgctgctgagcgccaagagcaaagaggaggtggcgtgtgcgctg
gtgcacatcctgcagagcactggcaaggccaaggacttcctgtcagatatggccatgact
gaggttgatcgcttcatggaccgagagcatctgatcttcagagaaaacacactggcaacc
aaagccatcgaggagttcctgaagctcatagcgcatcgatacctgaaggacaccattgga
gagtttatccgagcgctgtacgagtctgaggagaactgtgaggtggaccccatgcgaacg
cctccctcggtcctgtcggatcatcaggcaaacctgcgcatgtgttgtgaactggcgctc
tgcaagatcatcaactcccattgtgtgtttccccgcgagctgaaggaggtgttcgcctcg
tggcgtgtgcgctgtgctgaacgcgggcgtgaggacatcgctgaccgcctcataagctcc
tccctcttcctgcggttcctgtgtcccgccatcatgtcgccgtcgctgttcaacatgacg
caggagtatccgtccgaacgcacctcgcgaacactcacgctcatcgccaaggtggtgcag
agcctggccagcttttcaaagttcagtgggaaggaggactacctgggcttcatgaacgag
ttcctggagatggagtggggctctatgcaacagttcctgtatgagatctccaacctggag
tgtgtgagtaacgccggggcgttcgagggctacatcgacctgggccgagagctgtccatc
ctgcacagtctcctgtgggaggtcatggcgcagctgagcaaggacgccatattgaagctg
ggcccgttgccgcggttactgaatgacatcagcatggcgctgaggaacccacagctgcac
cgacaggcgagtcaccagccgccggaccgacaccagagccgacccgcattcagcagactc
aacaccaacgacttccagagcctcatgatgagagacctcaacagttctatagacatctct
cgtctgccgtctcccactggcactggtgttctctctcaccctggaatggctgctttctcc
gaccgggatccccgcggcaacaaggaaatgttctacgtgacccgcccacctctcgctcgc
tcaagccccgcctactgcactagcagctctgacatcactgaacctgacccgaaggttctc
agtgtgaataagagtgtttctatgatggacctgcaggattcgcgcatcaacagcgtgtcg
aacctgcactcggtgaacgacctgctgaactcgtctcagggctccctggcgggcctgggg
ttcggtccgctgggtggcgcccccctcagggcgggaggacgcgtgtcggcgggctcgggc
ggctccagcatgtcgggggggctgcgtctcagccactcgggcctgacgacggactcgctg
tctcagcagcagcagcagcaagcggccgccatgaacgtgcctctgtccttccagaacccg
ctgttccacctggcgtcggacgggccgcagtaccacacgccgccacacgggcccgccgcc
ccgccgccgctgctgctagcgcccgagccggagaacgggcacgtgggctacggcgtgccg
tcgttcgggcacagcgggttctctcgcagcgaggatctgtcggccctgaggaaccagaac
agtctggtgcagcccaacatcgtgcactcgcacagctacagcgacgacttcacgcggcac
aatcaggccgactacgcgcgcagacagctgtcgctgcaggtgcaggagaatctccagcag
caggttctgatgggcatcgccgcacagacagcaacgggcaccggcacgcccgcctctctg
gccacgcccccaaccaccattcaccccgcccgccaggcctccatgggcccgccccctcct
cagcgcatgaagcctcagcccccccaccagctgtccgtcagctcggccgctaactccacc
cccccgaagacacgcccccagagcgggaacctgctgcagtcgcccgagtccagctacggt
gggaggcagttgcccaggcaacagctgtccgtcaaagatagccccgcccccgggctgccg
catcagtccagcacggctgcggagagccccgcccctcagggcggagccaatgacagcgca
gagaacacaccgagcggccaatcagcaaaagcctcgcagcaaaccaaccagcagcatctg
ctcaagccaggcgcgaacaaacagggctcgaagtctccgtctacgctcaacccccccact
gctgcgtcggagcgtacggtggcctgggtgtccaacatgcctcacctctccgcggacatc
gagagcctgcgtgtggaccgagaggagttcaagctgaaggagcactccaagagcatggac
gagtcccgcctggaccgggtgcgcgagtacgaggaggagatccactcgctgaaggagcgg
ctgctgatgtcacacaggaagctggaggagtacgagcgtcggctgcagtcgcaggagcat
cagaccagtaagatcctgctgcagtaccagagccggctggacgacagcgagaggaggctc
cggcagcagcaggcgcagaaggactcgcagatcaagggcatcatcaacaggctgatggcg
gtagaggatgagctgagagggagtggaatgcctgacctcaaaaccagattgttcacagaa
cagccgatatatggggcccactctggaacatga
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integrated database retrieval system
