Pimephales promelas (fathead minnow): 120475368
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Entry
120475368 CDS
T08155
Symbol
myo5ab
Name
(RefSeq) unconventional myosin-Va
KO
K10357
myosin V
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
120475368 (myo5ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprm03019
]
120475368 (myo5ab)
04131 Membrane trafficking [BR:
pprm04131
]
120475368 (myo5ab)
03029 Mitochondrial biogenesis [BR:
pprm03029
]
120475368 (myo5ab)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pprm04812
]
120475368 (myo5ab)
Messenger RNA biogenesis [BR:
pprm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
120475368 (myo5ab)
mRNA cycle factors
P-body specific factors
120475368 (myo5ab)
Membrane trafficking [BR:
pprm04131
]
Others
Actin-binding proteins
Myosins
120475368 (myo5ab)
Mitochondrial biogenesis [BR:
pprm03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
120475368 (myo5ab)
Cytoskeleton proteins [BR:
pprm04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
120475368 (myo5ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
nSTAND3
AAA_16
AAA_22
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
120475368
NCBI-ProteinID:
XP_039521983
LinkDB
All DBs
Position
Unknown
AA seq
1801 aa
AA seq
DB search
MAAPELYSKFARVWIPDTTEVWRSAELTRDYRPGDTELHLRLEDETECEYKLDPKSGVLP
HLRNPDILVGENDLTALSYLHEPAVLLNLRVRFTESKLIYTYCGIILVAINPYESLPIYG
SDIINAYSGQNMGDMDPHIFAVSEEAYKQMARDEKNQSIIVSGESGAGKTVSAKYAMRYF
ATVSGSSDESSVEKKVLASSPIMEAIGNAKTTRNDNSSRFGKYIEIGFDRKHNIIGANMR
TYLLEKSRVVFQASEERNYHIFYQLCACAHLPEFEPLKLGSADDFPYTNQGRSPVIEGVN
DLKEMQATRKAFSLLGITEAQQMGLFQILSAILHLGNVEVKERGSSSSGISDENGHLAVF
CDLTEVSYESMAHWLCHKKLKTATETLNKPVTRLEAVNGRDALAKHIYAKLFSWIVGQVN
KSLSTSSKPHSFIGVLDIYGFETFEVNSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKE
QIPWTLIDFYDNQPCINLIEAKMGLLDLLDEECTMPKGSDDSWAQKLYNTHLKKSSHFEK
PRMSNTAFIILHFADKVEYQCDGFLEKNKDTVNEEQINVLKASKFALLVELFQDEETPAA
QSTTATSGRAKIGRSTQSFREHKKSVGLQFRNSLHLLMDTLNATTPHYVRCIKPNDLKAP
FILDPHRAVQQLRACGVLETIRISAKGFPSRWTYQEFFNRYRVLMRKKDILSDWKLTCQN
VLERLVENKDKYQFGKTKIFFRAGQVAYLEKLRADKLRMACIHIQKTIRCWLARKKYLRI
RQATITLQRYTRGHQARCLCTNLRRTRAAVIFQKNTRMWAARRQFLRQRTAAVLIQRLLR
GYTARLEYKQLVFEHKALLIQRWVRGFLARWRFRRIKRAVVYLQCCVRRMLARRELKKLK
IEARSVEHFKKLNVGMENKIMQLQRKLDEQHKENRELSERMSGLESHSAAEIEKLHIQLK
SLQEVEEEARHRGDLVTSLQEELELVRQELERNKEMVADLNEKNTLLKSEKEEMNRVIQE
QEKQIREIPDSTQPESTEHVQAQLNEERFRYQNLLTEYLKLEERYADLKSEIEAALDPSK
LGHYRADSGYSSSQSESIHSSVLTGSEVSSLEREDAVQTAADVSLLMKLQRRVTELEKEN
MELQSEMDTKEEQLQLERTKELEDCQRVLGAERDYEALKRQELESDNKKLKKDLQDLRQS
LSKGKGSKVASPGGQAYNVVLEQLNSTNEELEVRKEEVLILRSQLVNQEAFKHKETGSEG
DSGDSSRSPTLDLHELNEDGELWMAYESLKETNRILASQLQTQGQSHEKEVDGLRAELLR
LKAELGQQQQMMSESLQLPHDARVQASLQHEISRLTQQNMDLLEQTGKQDKVVRKLKKCL
KIYMKKFGEPEGVHFEQSSPENVVRESGRTVSIVRKERDFQGMLEYRKEDENKLFKILIT
DLKPRGVAVNLIPGLPAYILFMCLRHADYANDDQRVSTLLNSSINAIKSVLKKREDFETI
SFWLANTCRFLHCLKQYSGEEGYTKHNTPRQNEHCLSNFDLSEYCQVLSDLAIQIYQQLI
RVIENIIHPMIAPAMLEQETVQGVMGVKPTGMRKRTSSFPEDSCHSLESILKQLDVFYYT
LLQHGNDTELVRQVIKQQFYLICCVTLNNLLLRKDMCSWSKGLQIRYNVCQLEEWLLDKD
LQGSGARESLEPLIQAAQLLQIKKKSQDDADAICTMCTALTTQQIVKILSLYTPVNEFEE
RVSISFIKSVQNLLKDRKESSQLLMDAKIIFSVTFPFNPSSVALETIQIPSSLNLSFLTR
V
NT seq
5406 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgccggagctttactcgaagtttgctcgagtctggatcccagacaccaccgag
gtgtggagatcagcagagctgactagagactacaggcccggagacaccgagctacatctg
cggctcgaggatgagacggagtgcgagtacaagctggacccgaagagtggcgttctgcct
catcttcgtaacccggacatcctggtgggcgagaacgacctcacggctctcagttacctc
catgaaccggccgtgctgctcaacctgcgggtccgattcacagagtccaagcttatctac
acctactgcgggatcatcctggttgccatcaatccatatgaaagtcttcccatctatgga
tcagacatcatcaatgcgtacagtgggcagaacatgggtgatatggaccctcacatcttc
gctgtatcagaagaggcctacaaacagatggccagagacgagaagaatcaatccatcatc
gtgagtggagaatctggtgcagggaagaccgtctctgccaaatacgccatgcgttacttc
gctacagtcagtggatcctctgatgagtccagcgtggagaaaaaagtgctggcgtccagt
cctatcatggaggctataggaaacgccaagacgacgagaaacgacaacagtagtcgcttt
gggaagtacattgagatcggatttgacagaaagcacaacatcataggagccaacatgagg
acgtaccttctggagaagtctcgagttgtgttccaggcgagtgaggagagaaactatcac
atcttctatcagctttgtgcctgcgcccatttacctgagtttgaacctctaaagttaggt
agcgctgatgactttccctacactaaccaaggcagaagtcccgtcatcgagggagtgaat
gacctgaaggagatgcaggccacaaggaaagccttttcactgctgggaattactgaggca
cagcaaatgggtctgttccaaatcctgtcagccattctccatctgggaaatgtggaagtg
aaggagagaggatcttctagcagcggcatctctgatgaaaacggccacctggcggtgttt
tgtgacctcactgaggtttcgtacgagtccatggctcactggttgtgccataaaaaactg
aagaccgccacagaaaccctaaacaagcctgtcacccgtttggaggccgtgaacggccgt
gacgctctcgcgaaacacatttacgccaagctcttctcctggatcgtcggccaggtcaac
aaatccctgagcacttcctccaaaccgcactcgttcatcggcgtcctagacatctatggg
tttgagacgttcgaggtgaacagcttcgagcagttctgcatcaattacgccaatgagaag
ctccagcagcagtttaacatgcacgtgttcaaactggagcaggaggagtacatgaaggag
cagataccatggacgctcatcgatttctacgacaaccagccctgcatcaacctgatcgag
gccaagatgggcttgctggaccttctagatgaagaatgcactatgccaaaaggttcagat
gattcgtgggcgcaaaagctgtacaacactcacctaaagaaaagctctcactttgagaag
ccgcgcatgtctaacaccgctttcatcatactgcactttgcagacaaggttgaataccag
tgtgatggatttttggagaaaaataaagacacagtcaatgaagaacaaattaatgtgctg
aaggctagcaagtttgccttgctggtcgagctcttccaggatgaggaaacgcctgcagct
cagagcaccacagcaacatctggtcgagcaaagattggacggtccactcagtcttttagg
gagcataagaaatcggttggactgcagttccggaactctctgcacctgctcatggacacg
ctgaacgccaccaccccacactacgtgcgctgcatcaagccaaatgaccttaaagccccc
ttcatactggaccctcatcgagccgttcagcagctcagggcgtgtggagtcctcgagacc
attcgtatctcagccaaaggcttcccttccaggtggacttatcaagagttcttcaatcgc
tatcgtgttctaatgagaaagaaagatatcctctcagactggaagctgacctgccaaaac
gtcctagaacggcttgtggagaacaaagataaataccagttcggaaaaacaaagattttc
ttccgggccggacaggtggcttacctggaaaagctgagggcggacaaactccgtatggct
tgcatccacatccagaaaacaatccgctgctggctggcccgcaagaaatacctgcgtatt
cgccaggcgaccattaccttgcagagatacaccagaggacaccaagctcgatgcctgtgc
actaacctgaggaggacgcgggccgcagtgatctttcagaaaaacacacgcatgtgggcg
gcgagacgacagtttctgcgacagagaacggcggcggttctcattcagaggctactgcgc
ggatacacagccagactggagtacaaacagctggtgtttgagcacaaggctttactgatc
cagcgctgggtgcgtggattcctggcccgctggcgtttccgtcgcatcaagcgtgccgtg
gtgtatctgcagtgttgcgtgcgcaggatgctggcccgtcgagagctcaagaaactcaag
atcgaggccagatcggtcgagcacttcaagaagctcaatgtcggcatggagaacaagatc
atgcagctgcagaggaaactggatgagcagcataaggagaaccgagagctttctgagcga
atgagtggactagagagccacagcgctgctgagatagagaagttgcacatacagctcaag
tctcttcaggaggtcgaggaggaagcccgtcaccgaggagacctggtgacatcgttacag
gaggagctggaattggtccgtcaggagctagagaggaacaaagagatggttgctgatctc
aatgagaagaacacactgctgaagagtgagaaagaagagatgaacagagtgatccaggag
caggagaagcagataagagaaattccagattcgacccaaccggagtccactgagcacgtg
caagcccagctgaacgaggagcgattccgttaccagaaccttctgaccgaatacctgaaa
ctggaggagcgctacgctgatctcaaatcagaaatagaggctgctttggatccctctaaa
ctgggtcattacagagccgactctggctacagcagcagccaatcagagagcatccacagc
tctgtgctcacagggtcagaggtcagctctctagaaagagaggacgctgtgcagacggct
gctgatgtgtctctcctgatgaagctgcagaggagagtcactgaactggagaaggagaac
atggagctgcagagtgagatggacaccaaagaagagcagctacaactggagcgaactaaa
gaactggaagattgccagagagtattaggggctgagagagactacgaggctctgaagcgt
caggagctggagtctgacaataagaagctcaagaaggatctgcaggatctccgtcagtct
ctcagtaaggggaaggggtcaaaggtggcgtcccctggaggtcaggcatataacgtggtc
ctcgagcagctcaactccaccaatgaagagctggaggtgcgaaaggaggaggtgcttatt
ctacgatctcagctggtcaatcaggaggcatttaaacataaggaaacgggaagtgaagga
gattcaggtgactcaagcagatccccgactttggaccttcatgagctgaatgaggatgga
gagctctggatggcttatgagagcctgaaggaaactaacaggattctggcatctcagttg
cagacacagggacagtcccatgagaaggaggtggatggtttgagggcggagcttctgcgg
ttaaaggcggagcttggccagcagcagcagatgatgtcagaaagcttgcagcttccgcac
gacgctcgagtacaagcaagcctgcagcacgagatcagtcgcctcacgcaacaaaacatg
gacctcttagagcagacgggaaaacaggacaaagtggtccgcaaactaaagaaatgcctg
aagatatatatgaaaaagtttggggagcctgagggtgttcatttcgagcagtcctctcca
gagaacgtggtcagagagagcggtcgcacggtcagtatcgttcgaaaagagagggatttc
caaggcatgctggagtacaggaaagaagacgagaacaaactgttcaagatactcatcaca
gatctcaaaccgagaggtgtcgctgtgaatctgatcccaggcctgcctgcttatattctc
ttcatgtgtctgcgacacgccgactacgccaacgatgaccagcgggtctccaccctcctg
aactcctccatcaacgccatcaagagcgtactgaagaaacgggaagattttgagaccatt
tcattctggttggcaaacacctgtcgcttcttacattgtctgaagcagtacagcggagaa
gagggctacacaaagcacaacacccctcgacaaaacgaacactgtctgtcaaactttgac
ctgtctgagtattgccaggttctgagcgatctagccatccagatctaccagcagctcatc
agggtcatagaaaacatcattcaccccatgattgcaccagccatgttggagcaggagacc
gttcagggagtgatgggtgtgaagcccacaggaatgaggaagcgcacgtccagtttcccc
gaggacagctgtcactcgctggagtccattttgaaacagctggatgttttctattacacg
ctgctccagcatggcaacgacaccgagctggtccgacaggtcatcaaacagcagttctac
ctcatctgctgcgtcacactgaacaacttgctgctccgcaaggacatgtgctcctggagt
aaaggcctgcagatcaggtataatgtgtgtcagctggaggagtggctgctggataaagat
cttcagggcagtggagctcgtgagtctctggagcctctgattcaggcggctcagcttctg
cagatcaagaagaagagccaggatgacgcagacgccatctgcactatgtgcacggctctc
accactcaacagattgtgaaaatcctcagcttgtacacaccagtgaatgagtttgaggag
agagtgtctatatcattcattaagtctgtacagaatttattaaaggatcgtaaggagtct
tctcagttactgatggatgctaagatcattttctcagtcactttccccttcaacccttca
tctgtggccctcgagaccatccagatccccagcagcctcaatctgagcttcctgacgcga
gtgtaa
DBGET
integrated database retrieval system
