Pimephales promelas (fathead minnow): 120475389
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Entry
120475389 CDS
T08155
Symbol
tubgcp6
Name
(RefSeq) gamma-tubulin complex component 6 isoform X1
KO
K16573
gamma-tubulin complex component 6
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pprm03036
]
120475389 (tubgcp6)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pprm04812
]
120475389 (tubgcp6)
Chromosome and associated proteins [BR:
pprm03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
gamma-tubulin ring complex
120475389 (tubgcp6)
Cytoskeleton proteins [BR:
pprm04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
120475389 (tubgcp6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GCP6_N
GCP_C_terminal
GCP_N_terminal
GCP5-Mod21_C
DUF4573
IMS
Motif
Other DBs
NCBI-GeneID:
120475389
NCBI-ProteinID:
XP_039522006
LinkDB
All DBs
Position
Unknown
AA seq
2122 aa
AA seq
DB search
MSGCQGNSASITGLLTSLCDCCISGLSWKRCAPGTVSRESARRILRKRAYGALLAGLFQD
GLSKPAPQALVKTPSHNKILMISFDLRVSGHDEEAERLEELLGQLRDGAGLSELNSVLEL
LVQLAGSVATPLLSFSRDYMRRERPVQRRPPLGGYLSKDTQRLEERAWSLICGEEWGVFG
GVCRTLSIMDAPPGTGLLGLGRRLDFEEKFDRETRLSLFGALQHSKTTDMDIRLDMPPVP
SNADITGLSIRVPLSLDQSDDEGFQSSSNLTPDSQSEASPSPEIDVWEALRTFVPGRRRC
WENIGCPPGQKDPPYLTEAGREAFDQLYRLWEGEMRNVLATQTPSPLLPLPLDCQSQLVK
DVLNVLIGVSSATFPLNEASVQFDVRPDICVSGTSPESVSRLLGELAQYGTHYLRLSRFS
LSSGSQKGLVFQAFTGGLRRYLHYYRACVLSTPASLSLLTIACHFRKLGRQLRYLSELCC
VDGIAGVGRATFPMGVKLLSCLYNEAQSNCSNENHPVLLSLLKSSCEPYTRFVSDWVYGG
VFRDVYKEFMIEVNEDYLTHRDKNFWTQGYTLISRDAEDCVPVFLKHIANDVYVCGKTIN
LLKICCPQHYIFWSDIPVPRIAVTFSLQEVEEIERDCAVYRGRMETIARHSAISREEKAM
RTEQARQELINQVRETAAKTLERIRGRQVSQRLAEEAQKRERFEEMKQQLELDQEWRSAA
KQKEQEDDFGYARELRDREQRLQALEEQLERRARMDLIAQYGQLSEAAARRELRAMWKVQ
RMKLDERRMNFLQQEQQNVQALLEKFPLGLEGPPPKTAYKHQSAQLHTEQNLGEQLTADP
LIPESQNDEMHALISDGIDIADFLPKPPRLPDSGAVTQALQDIGSDLLQFPQKPHLLGQN
VSEVLESVPVPCPYGQASKSSFQLGQFNPEVSVGKPKASVHGHPSQSSVQLGDSTASGWN
KGPIRSLSNTSTQTTQGRTCEAEKQLTEEETGTEPSAASTGSEPKQATQEPTEKAKSCES
VSQPSHCSQPEEEQSVSPLISFHESESDTHTRNNSRDPAPALILSLSSSDIRGLISSDAH
IRVGEHVSEVTNLIPTANIHGHASDAHIRVGEHVSEVINLIPTANIHGHASDANIRVGEH
VSEVTTSIPTPNIHGHASDAHIRVGEHVSEVTNIIPTANIHGHASDAHIRVGEHVSEVTT
SIPTPNIHGHASDAHIRVGVHVSEVTPSIPTPNIHGHASDAHIRIGEHVSELTPSLPTPN
IHGHASDAYISVAAHVSEVTPSLPTPNIHGHASDAHIRIGERVSEVTPSLPTPNIHGHAS
DTHISVAAHVSEVTTSLPTPNIHDQAHIRVDKHVSEVTNLIPTANIHGHASDAHIRVDKH
VSEVTNLIPTANIHGHASDAHIRVCENVSEATTPLPTPNIRGHASDAHIRVGEHISEVNT
HIPIANIHGHASDAHIRIGEHISEVNTHIPIANIHGHASDAHIRIGEHISEVNTHIPIAN
IHGHASDAHIRIGEHISEVNTHIPTANIHGHASDAHIKVGEFVSDVAASCPLLGKFGHSS
DSTLKVGCVMPDAALSSTPLPGSAFGHASDSMLTLGCVVSGADPQRSALPGSEFGHSSQS
TLGSGCVVSGIETVRPSSLYSEARAHTSDSALGMGCVVGGVVPGSLYADRLLNKFDRASG
DTETPADTDTQAPPSELFSLDEGLSAWALGLGLSPKKSPEDRYLLSLASQYQVEQYQDSY
GLLTSAPESELLLQVTRGPNGLPVDPSLYRATDATAVQLSEMMPLPVLMKHSVTTPLITH
VSMVNKAVVDYFFVELGVEKHFKTLRHFLLMEDGEFALSLSDQLFEKLGSGQTPGELLTP
LVLNSILNKALQYSIHGDGELAAHFTFALRYLPEIFHPHAPDSLNCLELRYKVDWPVNIV
ITDSCLNKYNRLFSFLLQLKHMVWSLRDVWFHLKRTALVKGAGRSVQFHQLQLYRHEMQH
FVKVIQGYIANQILQVSWSEFTHKLSSASDLDAIHRTHAEYLNRAIFRGLLTEKAAPVMN
IIHSIFSLILKFRGQLIVQPWELQQGVPVHPSFIAMQQSYNTFKYYSRFLFKVVTKLVDK
GYQPHLEDFLLRINLNNYYKDS
NT seq
6369 nt
NT seq
+upstream
nt +downstream
nt
atgtccggttgccaaggcaacagcgccagcatcaccggactgctgacctcactctgcgac
tgctgcatctccgggttgtcatggaaacgttgcgctccaggcacagtgtcgcgggagtcg
gcgcggcggatcctccgcaagcgtgcgtacggggcattgctcgcgggactcttccaagat
gggttgtccaaaccggcaccgcaggccctggtgaaaacaccgtcccacaataaaatacta
atgatctcctttgacctgcgcgtttccggccacgatgaggaggccgagaggttggaggag
ctcctgggtcagctacgggacggggcggggctgtccgaactcaattccgtcctggagctt
ctagtgcagctggccgggtccgtggcaacaccccttctgtctttcagtcgcgactacatg
cggcgggagcgtcccgtgcagcgcagacccccattgggcgggtacctgagcaaggacaca
cagcgcttggaggagagggcgtggtctttgatctgtggggaggagtggggcgtgttcggg
ggcgtctgcaggaccctgagcatcatggacgccccaccgggcaccgggctgctcggactg
gggcgcagactggattttgaggagaagtttgacagagagacccgactgtcattgtttggt
gccctgcaacactccaaaaccacagatatggacatccgactggacatgccgcccgttccc
agtaacgcagatatcactggactgagcatacgggttcctctgtctctggatcagtctgat
gacgaaggcttccagtcttcctctaatctgactcctgattcccagtccgaggcgagtccc
agccctgagatcgacgtgtgggaggcccttcggacgttcgtgcccgggagacgacgctgt
tgggagaacattggctgcccgccgggtcagaaggaccccccgtacctgacagaagctggc
agagaggcgtttgatcagctgtaccggctgtgggaaggagaaatgaggaacgttctggcc
acacagacaccgtcaccactcctgccactgccactggactgccagagtcagctggtcaaa
gatgtgctcaacgtgctgatcggggtctcctcggccacgtttcctctcaacgaggctagt
gtacagtttgatgtccgtccggatatatgtgtgtccgggacgtcccctgagagtgtgtct
cgtctgctgggtgagctggcacagtacggcacacactatctgcgcctcagccgcttctcc
ctgagcagcgggagtcagaagggactcgtcttccaggccttcacaggtgggctgcggcgt
tacctgcattactacagggcgtgtgtgctgagcacaccggcctctcttagtctactaact
atcgcttgtcatttccgcaaactggggcgtcagctcaggtatctgtcagaactgtgctgt
gtggatggaatcgccggtgtgggacgagcaacgttccccatgggtgtaaaactgctgtcg
tgtctgtataatgaagctcagagtaactgcagtaatgagaatcatccggtgctgctgtcg
ctgctgaagagcagctgtgagccgtacacacggtttgtttcggactgggtgtacggtggc
gtcttccgtgacgtttataaagagtttatgattgaggtcaatgaggattatctgacccac
agagataagaacttttggacgcagggctacactctcatttcgcgggatgcagaggactgt
gtgccggtgtttctcaaacacattgcaaacgatgtttacgtctgcgggaaaacaatcaat
cttctgaaaatctgctgcccacagcactacatcttctggtcggatataccagtgcccagg
atcgctgtgacgttttccctgcaggaagttgaggagattgagagagactgtgccgtgtac
cgagggcgaatggagacgattgcaaggcacagcgccatcagcagggaggagaaggccatg
cggactgaacaggctcgacaggagctcattaaccaggtcagagagacagcggccaagacc
ctggagagaatcagaggccgccaggtgtcgcagcgtctggcggaggaggcccagaagaga
gagcggtttgaagagatgaaacagcagctggaacttgaccaggagtggcgtagtgctgcg
aaacagaaggagcaggaagatgatttcggctacgctcgggagctcagagaccgagagcag
aggctgcaggccctcgaggagcagctggagcgccgggcacggatggatctgatcgctcag
tatggtcagttatcagaagccgctgctagacgagagctcagagccatgtggaaggtgcag
aggatgaaactcgacgagcgcagaatgaacttcctgcagcaagagcaacagaacgtacag
gctcttctggagaagtttcctttaggtctggagggcccccctccgaaaacagcctacaaa
catcagtctgcacaactacacactgagcagaatcttggtgaacagctaacggcagatcct
cttatcccagaatcccagaatgatgaaatgcatgctctcatatcagatggaattgacatt
gctgacttcctccccaagcctccacgcctccctgacagtggtgccgtgacccaggccctc
caggacattggttctgacctgctacagtttcctcagaaaccccacctacttggacaaaat
gtttctgaagtcctagagtcagtccctgtgccttgtccatatggacaagcatccaagtcc
agcttccaattgggtcagttcaatccagaggtgtccgtaggtaagccgaaggctagtgtt
catggacacccctcacagagctcagtgcagctgggagactccactgcctcggggtggaac
aagggtccaatccgttcgttgtcaaacacctctacacaaaccactcaagggcgaacatgt
gaggcagaaaaacaactaactgaagaagagacaggaacagagccctcggcggccagcaca
ggttcagagccaaagcaagccacacaggagccaacagagaaagccaagtcctgtgagagt
gtcagccagccctctcactgttctcagccagaggaagaacaatctgtgtctcctctcata
agcttccatgagtcagagtctgatactcatacgagaaataacagtcgtgatcctgctcca
gcactgatcttatccctgtcctcctctgatatccgtggcctgatatcctctgacgctcat
ataagggttggcgaacatgtttctgaagtgaccaatctcatccctaccgctaatattcat
ggccacgcctctgatgcccatataagggttggtgaacatgtttctgaagtgatcaatctc
atccctaccgctaatatccatggccacgcctctgatgccaacataagagttggcgaacat
gtttctgaggtaaccacttctattccaacccctaacatccatggccacgcctctgatgcc
catataagggttggcgaacatgtttctgaagtgaccaatattatccctaccgctaatatt
catggccacgcctctgatgcccacataagggttggtgaacatgtttctgaggtaaccact
tctattccaacccccaacatccatggccacgcctctgatgcccatataagggttggcgta
catgtttctgaggtaaccccttctattccaacccctaacatccatggccacgcctctgac
gcccatattaggattggcgaacatgtttctgagttaaccccttctcttccaacccctaat
atccatggccacgcctccgatgcctatataagtgttgccgcacatgtttctgaggtaacc
ccttctcttccaacccctaacatccatggccacgcctctgacgcccatataaggattggt
gaacgtgtttctgaggtaaccccttctcttccaacccctaatatccatggccacgcctct
gacacccatataagtgttgccgcacatgtttctgaggtaaccacttcccttccaacccct
aacatccatgaccaggcccatataagggttgacaaacatgtttctgaagtgaccaatctc
atccctactgctaatattcatggacacgcctctgatgcccatataagggttgacaaacat
gtttctgaagtgaccaatctcatccctactgctaatattcatggacacgcctctgatgcc
catataagggtttgcgaaaatgtttctgaggcaaccactcctcttccaacccctaacatc
cgtggccacgcctctgacgcccatataagggttggcgaacacatttctgaagtaaatact
catatccctatcgctaatatccatggccatgcctctgacgcccatataaggattggcgaa
cacatttctgaagtaaatactcatatccctatcgctaatattcatggccatgcctctgat
gcccatataaggattggcgagcacatttctgaagtaaatactcatattcctattgctaat
attcatggccacgcctctgatgcccatataaggattggcgaacacatttctgaagtaaat
actcatatccctaccgctaatattcatggccacgcctctgacgcccatataaaggtgggt
gagtttgtgtcagatgtcgccgcctcttgcccacttttgggcaaatttggtcactcttct
gacagcactcttaaagtgggttgtgtgatgccagacgctgccctttcatccacccctctg
cctggcagcgctttcggacatgcgtcggactccatgctaacattggggtgtgttgtatct
ggcgcagaccctcagcgctctgcattgcctggaagtgagtttggacattcctcacagtct
accttgggtagtgggtgtgtggtcagtgggattgagactgttcgacccagttctctatac
agcgaagcccgcgcgcacacatcagactctgctctgggcatgggctgtgtggttggcggg
gtggtgccaggcagtttgtatgctgacagactactgaacaaatttgaccgagcatcagga
gacacagagacaccagctgacacagacacccaggcgccccctagtgagctgttctccctg
gatgagggactgtctgcctgggctctgggactaggattgtcccctaaaaagagtccagag
gatcgctatcttctcagcctggcctcacagtaccaagttgagcagtaccaggactcatac
ggcctgttgacttcggctccagaatctgagctgctgcttcaggtcacacgaggcccgaac
ggcctacctgtcgacccctccctgtaccgggccactgatgccactgctgttcaactaagc
gagatgatgccacttcctgtgctcatgaaacactctgttacaacaccactgattacacat
gtgtccatggtaaataaggccgtggtggattattttttcgtggagttgggcgtggagaag
cattttaaaactctcaggcatttcctgttaatggaggatggagagtttgccctctctctc
agcgatcagctcttcgagaagctgggcagtggtcagacccctggcgagctgctcaccccg
ctggtgttgaactccattctgaataaggcgttacagtacagcattcatggggacggcgag
ctggcggctcacttcacgtttgctctgagataccttcctgagatcttccaccctcacgcc
ccagactcgctgaactgtctcgagctccgatacaaggtggactggccagtgaatatcgtc
atcacagacagctgtctgaataaatacaacagactcttctccttcctgctgcagctcaaa
cacatggtgtggtcgctccgagacgtctggtttcacctcaagagaaccgcgctggtgaaa
ggtgccggtcgctccgttcagttccatcagctgcagctgtacagacacgagatgcagcac
tttgtgaaggtgatccagggctacatcgctaaccagatcctccaggtgtcctggagcgag
ttcacacacaaactgagcagtgccagcgatctggacgccattcaccgcacacacgccgaa
tacctcaacagagccatcttcaggggtttgctgacggagaaagccgcccccgtcatgaac
atcatccacagcatcttcagcctgatcctgaagtttcgcggtcagctgatcgtacagccg
tgggagctccagcagggggtgccggtgcaccccagcttcatcgccatgcagcagtcctac
aacaccttcaagtattactcccgcttcctgttcaaagtggtgaccaaactggtggataaa
ggctatcagccgcatctggaggacttcctgttacggatcaacctcaataactactacaaa
gactcttga
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