Pimephales promelas (fathead minnow): 120475503
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Entry
120475503 CDS
T08155
Symbol
dmxl1
Name
(RefSeq) dmX-like protein 1 isoform X1
KO
K24155
rabconnectin-3a
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
120475503 (dmxl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprm04131
]
120475503 (dmxl1)
Membrane trafficking [BR:
pprm04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
120475503 (dmxl1)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
120475503 (dmxl1)
RAVE complex
120475503 (dmxl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rav1p_C
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
WD40
Beta-prop_WDR5
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_DCAF4
WD40_Gbeta
Beta-prop_VPS8
PEP5_VPS11_N
Beta-prop_HPS5
Beta-prop_CAF1B_HIR1
Beta-prop_SPT8
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
120475503
NCBI-ProteinID:
XP_039522136
LinkDB
All DBs
Position
Unknown
AA seq
2896 aa
AA seq
DB search
MNLHQVLTGAVNPGENCYSVGNVNNQPFTAYASGCDIVILGSDFERVQIIPGAQHGNIQV
GCVDCSLQGGQIAASYGNMICVFEPVEVSPQGKAQKQKLNYHWQKSGQFALQSVAQILAW
HPNGSCLLTGSASLQLWCDVCVSADPEDEAVGPQRCWRCIWQSKSAASTHFIKFSPDGEF
FATAGQDDCLVKVWYSTSKWQADATKLFTPLDLRSEINFSFIYLAHPRSVTGFSWRKTSK
HMPRGVVCNVLLTCCKDSVCRLWAETLLPSDCLLSGLRHNQCNNNKTNNMKKSSSSTLSQ
SPMELNLKPSWREEVRSLSQLSYTGPLPQQQNKHYSHRANITHANALCHFHIAASINPAT
DIPLLPSISAMSGADEEEPGGSFTVHWLNNKELHLTLSMEVFLQQLRSRDEQSGPADTHD
VDEEASGAYAVAVDHQVDVLLGDWTRGADMLFSIHPMDGSLLVWHVDWLDEYQPGMFRQA
QVSFVSRIPVAFPTGDANSLSRSVVMYACNKNVDLAIQHGRQRPAGLTHSSSALIGQSKP
SSNSLRLSIFTPSVLMISKHADGSLNQWAVSFAEDSGFSTVLSVSHKSRYCGHRFHLNDL
ACHSLLPLLLTTSHHNALRTPDADLTRPPDPARRSRASSGGVSQDPNAVYSELILWRVDP
VGPLSFSGGVSELARINSLHASAFANVAWLPALIPSNCLGVYGNSPSACFIASDGHSLRL
YQAIIEAKKLLSELSNPDISKCVSEVFNIISQQSTAKPGCIIELDAITDFQGKETQLLHV
FEEELILGNEKIDDCLQDSVPSRTLFSARFFLVVVEISENARSLLHMWHLQLDAVPVIME
QTQPAERESVSPSPTNCSQFNFETVGSPHVQRARLGASNLQSACRLALTRRKVFSQELAV
PPGVEVMRATPAAGHLSSSSLQPAGRAPYLLATSCSDGSVRFWRCSAVSDPDSSGEAAYV
WEEWPLLVEDGVASTSALSVSGRIMGLSCCHTSRVAVAHQNNGSGSAEPLMNVSIFQCDS
TGGSQWMLEQVLKVSGSYSPSSNECDKSLMGLSSSDWLVVAGKRQVHLDWVSREDGSHVL
TVALGSKLYMYGLLSGKPPDLGLSDSGREHHCARLVLLRVVDLVSSVEGSLPIPVSLSWV
RDGILVVGMDCEMHVYSQWQPALTAGGSSVGTGSVTSLKLEGLSPNPAKKTLSRSMTSLA
QKLSGKRTVYDLPAEMEDSGLFEAAHHLSPTLPQYHPVQLLELMDLGKMRRAKAILSHLV
KCIAGEIVTLKDPAVSQERRLRSLTISASGSTTRDPKMFSKGESSDYTEIDSIPPLPLYA
LLAADDETAPGAKERADSVSAHGASASSQSGAYDELFSSPGVSADDLDPFDADEEDASAK
VIDLSKYSPTFFGSEHAQVLSGHLLHSSLPGLTRMEQMSLMALADTIASTSTDIGESQGK
GKGGETLDECGLKFLLAVRLHTFLLTSLPPAHRAQLSCQGLSTCHYAWAFHSEAEEELLH
MLPALQKADPCWPELRAMGVGWWLRSTNKLRRCIEKVAKAAFQRNNDPLDAALFYLAMKK
KAVVWGLYRSHQNSKMTSFFSNNFSEDRWRRAALKNAFSLLGKQRFQHSAAFFLLAGSLK
DAVEVCIEKMQDLQLALVICRLYESEFEMSCTYKRILQRHVLGYDHQMAPHQDPFLRSMA
FWVLDDYSRALDTLLEQPNEGAAGSSPCNPEVFNFYTFLRSHPLLLRRHFGSSEKPGVCL
PVEGREVDSISLTERRLFFSAAHTHLQAGCPMLALEVLSKMPKVVKRSKARENRPVSWSS
SDGLEKQDWSQPVLNGFQSVSSLSSPREDSHSDSVLSFDWSQPSLALQDEPLEMKWDSDE
SDVEESGLAMKTVRPETSGDAPVLASTPTDRGDPPALTEDILAARLKFSSCLKILSSELR
TLSTGYELDGGKLRHQLCHWLEREVSALQGVCGYNPFLQTPPEGISSDPSRREDPGREDQ
RRRRLWLKRNQPLLRIFLSYCSLHGSHGGGLASVRMELILLLQESQQDDGLQISVPAPQN
VSVPLLLAWTANSKTVVANPIVHLTNLTHDLLHTINALDAPPHPDVVNNEIFVMHTLAAS
LSACIYQCLCDGHSYSHVNPFTGITYQSVLITHQPPVRSVSMEEPVLPNTAPAQWPGVSV
LMRLLESSCDESQPGLSVLLCEILSAVFLSLFVHGLATHSTHELLRIVAHPLNAKLWVAV
FGGGARVPVPEKPTSPTAADPGDPVEDAERKQRRFRIPSSRSNSRDAPASPRPAAQPLAP
VFRERFIPPELSIWDYFIAKPYLPPSASRVEYDSEESQGSEDEDEDEDEGDCFDVSSPLA
EHSNSNSYSWCLMRLAMVQMVQFNLKTFYPTTGHDLLDLPVCSPLCHAALKTLQRWETLL
LKRLEIFGGPPPKFISSQLLDESVSSGPALLRHKALFEPSNTPFRSRRRSALPVKRLWQY
LVKQEEVQETFIRNIFTKKRDLNEETDSALLDSTHNQIEADLGYPGGKARIIHKESDIIT
AFAINKANRNCLVIASTHDIQELDVSSILATQVLTWIDDEAEAEVKGTDDFLVVHARDDI
STHSSTPYTHSSPGTPINMPWLGGLQTGRGAAVLIKRNINNVRRMTSHPTLPYYLTGAQD
GSVRMFEWGHSQQITCFRSPGNTRVTRIRFNYQGNKFGIVDADGALSLWQTSTSGQPHKP
YLTLQCHNKTANDFVFVGSSSLIATAGLSTDNRNVCLWDTLVTPALSLVHAFSVHETGST
VLALASKQQVLLSGGRKGWISVLDLSLKVQRQSFQAHDSPVKALAVDNTERSFISGSAEG
NIKVWSMSTQTLLHSFASEHARQSLFRNLGTGVMQIETAPANQVFSCGADGTMKMRVLPD
ATSAYGTARNDVKFIM
NT seq
8691 nt
NT seq
+upstream
nt +downstream
nt
atgaacctccaccaggtgctcacaggcgccgtcaaccccggagaaaactgctactctgtg
ggcaacgtcaacaaccagccgttcacggcgtacgcctccggatgtgacatcgtgattctg
ggcagcgactttgaacgagtccagatcatcccaggagcccaacatgggaacattcaggtg
gggtgtgtggactgctctctgcaggggggacagatcgcggcttcgtacggaaacatgatc
tgcgtgtttgagccggtggaggtcagtccgcaagggaaagcacagaaacagaagctgaat
tatcattggcagaagagcgggcagttcgccctgcagtccgtcgcacagatcctggcgtgg
cacccgaacggttcgtgtctcctgacgggctcggcgagtcttcagctgtggtgtgacgtg
tgtgtcagtgcagatcctgaagatgaggccgtgggtcctcagcgctgctggagatgcata
tggcaaagcaagtccgccgcctcgactcacttcatcaagttttcccctgacggagagttt
tttgccaccgcaggacaggacgactgcttggtgaaagtgtggtacagcaccagcaaatgg
caggcggacgccaccaagctcttcaccccgctcgacctgcgctccgagatcaacttctcc
ttcatttacctggctcaccctcgctccgtcaccggcttctcctggaggaagaccagcaaa
cacatgcccagaggagtggtgtgtaacgtgctgctgacctgctgcaaggacagtgtgtgt
cgactgtgggccgaaacgcttctgcccagcgactgcctgctgtccggactcagacacaac
cagtgcaacaacaacaagaccaacaacatgaagaagtcgtccagcagcaccctgagccag
agcccgatggagctgaacctgaagccgtcgtggagagaggaggtgaggagtttatctcag
ctctcgtacaccggccctcttccacagcagcagaacaaacactactcacaccgtgccaac
atcacgcacgccaacgccctgtgccacttccacatcgctgccagcatcaacccagccaca
gacatccctctgctgccctccatctcggccatgagcggcgcggatgaggaggaaccgggc
ggctccttcaccgtccactggctcaacaacaaggagctgcacctgacgctgagcatggag
gtgttcctgcagcagctgcggagccgagacgagcagagcggccccgctgacacacacgat
gtggacgaggaggcgagcggcgcgtatgctgtggctgtggatcatcaggtggatgttctg
ctgggagactggacccgaggagcggatatgctgttcagcatacacccgatggacggctcg
ctgctggtgtggcacgtcgactggctggacgagtaccagccgggcatgttccgacaggca
caggtgtccttcgtgtccagaattcccgtggccttccccaccggtgacgccaactcgctc
agccgcagcgtggtcatgtacgcctgcaacaaaaacgtggacctggcgatccagcacggg
cgtcagcggcccgcgggtctcacgcactcgtcctcggcgctgatcggtcagagcaaaccc
tcgtccaacagcctgcgcctcagcatcttcacccccagcgtcctgatgatctccaaacac
gccgacggatccctcaaccagtgggccgtcagcttcgccgaggactctgggttctccacg
gtgctcagcgtgtcccataagtcccgatactgtggccaccgcttccacctgaacgacctg
gcctgccactcgctgctgccgctactgctgaccacctcgcaccacaacgccctgaggaca
cccgacgccgatctgacccggccgccggacccggcccgcaggagccgagcctcatccgga
ggcgtctcgcaggacccgaacgccgtctacagcgagctgatcctgtggcgcgtggatccg
gtgggaccgctgtcgttctcgggaggcgtgtcggagctagcgaggataaactcgctgcac
gcgtcggccttcgctaacgtggcctggctgcccgcgctcatccccagcaactgcctcggt
gtgtatggaaactcacccagcgcctgcttcatcgccagcgacggacactcgctgagactg
tatcaggccatcatagaggccaagaaactgctgagtgaactctccaaccccgacatctcc
aaatgcgtcagcgaggtgtttaacatcatcagccagcagtcgacggccaaacccggctgc
atcattgagctcgacgccatcacggactttcaggggaaagagacgcagctgttgcacgtg
tttgaggaggagctgatcttgggaaatgagaagatagacgactgcctgcaggattctgtc
cccagccggacgctgttctccgctcgcttcttcctggtggtggtggagatctcggagaac
gccagatctctcctgcacatgtggcatcttcagttagacgccgttcccgtcattatggag
caaactcaacctgcagagagagagagtgtgtctccatcacccacaaactgctctcagttt
aacttcgagacggtcggctcgccgcatgtccagagagcgagactcggcgcgtccaacctc
cagagcgcctgccgcctcgcgctgacccgcaggaaggtgttcagccaggagctggccgtg
cccccgggcgtggaggtcatgcgagcgacgcctgctgcaggacacttgagttcttcgtct
ctgcagccggctggacgggctccgtatctgctggccacatcgtgctccgacggatcggtc
cggttctggaggtgtagcgccgtctccgaccccgatagctctggagaagcggcgtacgtc
tgggaggagtggcctttgctggtggaggacggcgtggctagcactagcgctctgagcgtg
agcggtcggataatgggtctcagttgctgccacaccagcagagtcgccgtagcgcaccag
aacaacggatccggttctgccgagccactcatgaacgtgagcatattccagtgcgactcc
accggcggctcccagtggatgctggaacaggtcctgaaggtcagcggctcgtacagcccc
agtagtaatgagtgcgataagagcctgatgggcttgtcgagcagtgattggctggttgtc
gctgggaagaggcaggtccacttagactgggtttccagagaagacggttctcatgtatta
accgtcgctctgggatccaagctttacatgtacgggttgctttcgggaaaacctccggat
ctgggtctgtccgacagcggcagggagcaccactgcgcccgcctggttctgctcagagtg
gtggatctagtgtcgtccgtcgaggggtcgctacccattccggtctcgctgtcttgggtg
cgggatgggatcttagtggtcgggatggactgtgagatgcacgtctactcccaatggcag
ccggcgctgaccgccggagggagcagcgtgggcaccggcagcgtgacgtctctgaaactg
gaagggctcagtccgaatcctgctaaaaagactctgagcaggtccatgaccagtttggct
cagaagctcagtggaaagagaaccgtgtacgacctcccggctgagatggaggactctggg
ctgttcgaggccgcgcaccacctgtcgcccactctgccccagtatcacccggtgcagctg
ttggagctcatggacctcgggaagatgcggcgggccaaagccatcctttcccatctggtg
aagtgcatcgccggagagatcgtgaccctgaaggaccccgctgtcagccaggagcgccgt
ctgcgctcgctcaccattagcgccagcgggagcaccaccagagacccaaagatgttcagc
aagggcgagagctcggactacaccgagatcgactccatcccgccgctgccgctgtatgcg
ctgttagccgccgatgacgaaacggcccccggtgccaaagaaagagcggacagcgtgagc
gctcacggcgccagtgcgtccagtcagagcggcgcttacgatgagctcttctccagcccc
ggcgtcagcgcggatgacctggacccgtttgatgcggacgaggaagatgctagcgctaaa
gtcatcgatctgtccaagtacagccccacgtttttcggctcggagcacgctcaggtgctg
tccggacacctgctgcactccagcctgccgggcctgacccgcatggagcagatgtctctg
atggccttggcggacaccatcgcctccaccagcaccgacatcggagagagccaaggaaaa
ggcaaaggcggagagactctggatgaatgcggactgaagttcctgctggccgttcgcctg
cacaccttcctcctgacgtctctgcccccggctcatcgagctcagctgtcctgtcaaggc
ctgtccacctgccactacgcctgggcgttccactccgaggccgaggaggagctgctccac
atgctccccgcgctgcagaaggctgacccctgctggccggagctgcgggccatgggtgtg
ggctggtggctgcgcagcaccaataagcttcgcagatgcatcgagaaggtggcaaaagct
gcttttcagagaaacaacgacccgttagacgcagccttgttttatctggccatgaagaag
aaagctgtggtttggggactgtacaggtctcaccagaactcgaagatgacctcgttcttc
agcaataacttcagtgaagatcgctggaggagagcggctctgaagaacgccttctctctg
ctggggaaacagcgcttccagcattctgcggctttctttctgctggctggatccctgaaa
gatgctgtcgaggtctgtatagagaagatgcaggacctccagctggctctggtcatctgt
cgactgtacgagtcggagttcgagatgtcctgcacctacaaacggatcctgcagaggcac
gtgttgggttatgaccaccagatggcgccgcaccaggacccgttcttgcgcagcatggca
ttctgggtattagacgactacagcagggcactggacactctgctggagcagcccaatgaa
ggcgccgccggctcgtctccctgtaaccctgaggtgtttaacttctacacgttcctgcgc
tcgcacccgctgctcctgcgccgccacttcggctcctccgagaagcctggcgtgtgtctg
ccggtcgaggggcgcgaggtcgactccatcagcctcaccgagagacggctgttcttcagc
gccgcgcacacacacctgcaggccggctgccccatgctggcgctcgaggtgctctccaaa
atgcccaaagtggtgaagcgctcgaaggcgcgagagaaccggcccgtgtcgtggagctcg
tccgacggcctggagaagcaggactggtctcagccggtcctcaacggcttccagtcggtg
tcctcgctctcgtctcccagagaggacagtcattcggactcggttctgagctttgactgg
agccagccctccctcgccctgcaggacgagcctctggagatgaagtgggactcggacgag
tcggacgtggaagagtcgggcctggccatgaagaccgttcgcccggagaccagcggagac
gctccggtcttggcctccaccccgacggaccgtggcgatcctcccgccctgaccgaggac
atcctcgcggcccggctgaagttcagctcctgcctgaagatcctgagctcggagttacgg
actctctccacgggctacgagctggacggagggaagctgaggcatcagctgtgccactgg
ctggagcgtgaggtgtcggccctgcagggcgtctgcgggtacaacccgttcctccagacc
ccgcccgagggcatctcctcggacccgagccggcgggaggatccgggtcgggaggaccag
cgccggcggaggctgtggctgaagaggaaccagcccttgctccgcatcttcctcagttac
tgcagtctccacggctctcacggaggaggactggcctccgtcaggatggagctcattctg
ctcctgcaggagtcccagcaggacgatggtctgcagatctctgttcccgctccgcagaac
gtctctgttcctcttcttcttgcatggaccgccaactccaaaactgtggtggccaatccc
atagtgcacctcaccaatctgacccatgacctcctgcatacgatcaacgccctcgacgcg
cctccgcacccggacgtcgtcaacaacgagatcttcgtgatgcacacgctggcagcttct
ctgtcggcctgcatctaccagtgtctctgcgacggacacagttacagccatgtaaacccg
ttcacgggcatcacgtaccagagcgtcctgattacccatcagcccccggtgcggagtgtc
agcatggaggagcccgtcctgcccaacactgctcctgcccagtggcccggagtgagcgtg
ctgatgcgtctgctggaatcgtcctgtgacgagagtcagcccggtctctcggtgctcctg
tgtgagatcctgagcgccgtgttcctcagcctgttcgtccacggcttggccacacactcc
acacacgagctgctccgcatcgtcgcacacccgctcaacgctaagctctgggtcgccgtg
ttcggcggcggcgctcgagttcccgtgccggagaaacccacatcacccacagctgctgac
cctggtgaccccgtggaggatgcggagcgcaagcagaggcgcttcaggattccctcgtcc
cgcagtaactccagagacgctcccgcgagtccccgacccgccgcgcagccgctagcaccc
gtcttcagggagcgcttcatcccgccggagctcagcatctgggactacttcatcgctaag
ccgtacctgccgccgtccgccagccgagtggaatacgactctgaggaaagccaaggcagt
gaggatgaggatgaggatgaggatgaaggagattgtttcgatgtcagctctccactggca
gaacactccaacagtaactcgtacagctggtgtctgatgcgattggctatggtgcagatg
gtgcagttcaacctcaagaccttctacccaacgacaggtcacgacctcttggatctgccc
gtgtgctctccgctgtgtcacgcggctctgaagacgctccagcgatgggagacgctgctc
ctcaagaggctggagatcttcggaggtcctccgccaaagttcatctcctcgcagctgctg
gacgagagtgtgtcgtcgggtccggcgctcctgcggcacaaggccctgttcgagccctca
aacacacccttcaggtcccgccggcgctcggctctgcccgtgaagcgactctggcagtat
ctggtcaaacaggaagaggttcaggaaaccttcatacgaaacatcttcacgaagaaacga
gatctgaatgaggagactgacagtgcgctgctggattccacacacaaccagatcgaggcg
gatctgggatatcctggaggaaaagctcgcatcatccacaaggagtctgacatcatcacg
gcgttcgccatcaataaggccaatcgcaactgtttagtgatcgcctccacacacgacatc
caggagctggacgtgtcgtccatcctcgccacacaggtgctcacgtggatcgacgacgag
gcggaggccgaggtcaaagggacggatgacttcctggtggttcacgcgcgggacgacatc
agcacgcacagcagcacgccgtacacacacagcagccccgggacgcccatcaacatgccc
tggctgggcggcctgcagacgggcagaggagccgccgtgctcatcaagcgaaacattaac
aacgtgagacggatgacatcacaccccacactcccctactacctgacgggggctcaggac
gggagcgtgcgcatgttcgagtggggtcactcgcagcagatcacctgcttcaggagtccc
gggaacaccagggtcaccagaatacgcttcaattaccagggcaataagtttgggatcgtg
gatgcggatggagcgctcagcctatggcagaccagcacttcaggacaaccacacaaaccc
tatctgacacttcagtgtcacaataagacggcgaacgactttgtgtttgtgggctcgtcg
tctctcatcgccaccgcaggcctgtcgacagacaacaggaacgtgtgtctgtgggatacg
ctggtcacgccggcgctcagtctggttcacgccttcagcgtgcacgagacgggctccacg
gttctggctctggcctctaaacagcaggttctgctcagcggagggaggaagggctggatc
agtgttctggatctgagtctgaaggtccagcgccagagtttccaggcccacgactcgccg
gtcaaagcgctagctgtggacaacaccgagagaagcttcatcagcggatccgccgagggc
aacatcaaggtgtggagcatgtcgacccagacgctcctgcacagcttcgccagcgaacac
gccagacagtcgctcttccgcaacctcggcacgggcgttatgcagatcgagacggcgccg
gccaatcaggtgttctcctgcggcgccgacggcaccatgaagatgcgcgttctccccgac
gccacgagcgcgtatggcaccgccaggaacgacgtcaagtttatcatgtag
DBGET
integrated database retrieval system
