Pimephales promelas (fathead minnow): 120475516
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Entry
120475516 CDS
T08155
Symbol
trim36
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM36 isoform X1
KO
K12013
tripartite motif-containing protein 36 [EC:
2.3.2.27
]
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprm04131
]
120475516 (trim36)
04121 Ubiquitin system [BR:
pprm04121
]
120475516 (trim36)
Enzymes [BR:
pprm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120475516 (trim36)
Membrane trafficking [BR:
pprm04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
120475516 (trim36)
Ubiquitin system [BR:
pprm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
120475516 (trim36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-B_box
COS
zf-RING_UBOX
SPRY
ANCHR-like_BBOX
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
zf-C3HC4_3
RING_XB3-XBAT31
zf-RING_5
zf-RING_2
RsmF-B_ferredox
U-box
Motif
Other DBs
NCBI-GeneID:
120475516
NCBI-ProteinID:
XP_039522163
LinkDB
All DBs
Position
Unknown
AA seq
745 aa
AA seq
DB search
MSDSEMSEFASIVERIERGEVPMKSIERELICPICKELFTQPLILPCQHSVCHRCVKDVL
LPNHEDSFSTDAGSESSNPGSPRSRVPSPSTERLDRLVRSASLRRAFGGRGSISSPGWRR
SSVTPRITTFPCPGCQHDIDLGERGISMLFRNFTLESIVERYRQAARAAVAIMCSVCKPP
LHEATKSCMDCRTSYCNECFKLNHPWGTPKAQHEYVGPTTNFRPKVLMCPEHEMEKVNMY
CEVCRRPVCHLCKLGGSHANHRVTSMSSAYKILKEKLSKSIHYLISKEDQVRTQISELET
MINRTEENGQLAERRANEHFERLFETLQERRTEMLRCVEQARTLRVDRLRAQVEEYQGML
ENSGLVGYAQEVLKETDQSCFVQTAKLLHVRIQKATESLKTFQASATPSFEEFVLDTSKE
EILLKELSFGGVPDPPVIDLSRCRVYNEGLIHWRLAEDSLPTDRHVLEFRRVCEEEDDEE
SRWRATECVYGSSTVVSDLALDSRYSFRVKSFRNSVCSPYSPAVTFHTPPAPVFGFLFNE
KCGFSAERLTLSKRRDSVESVAGLSFLLCAERVQTGSYICLDYIIGDTGISHGRHYWAFR
VDPNSYMVKVGVASDCKLSEWFHNSRDSSSPRYDQDSGHDSGSEDACFEASQPFTLLTVG
MGRLFVPKASLGAGDMGRVLPAPQRIGVLLDYDAGRVFFYDADSMRCLYERAVDCSGTMF
PAFGLLGGGSVHLEEFLTAKRLSYM
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgtcggactcggagatgtccgagttcgcgagtatagtggagcgcatcgagagaggcgag
gtgccgatgaagagcatcgagagggagctgatctgtccgatctgtaaagagttgttcact
cagccgctcatcttgccctgtcagcacagtgtgtgtcaccggtgtgttaaagacgtgctc
ctcccgaaccatgaggactccttcagcaccgacgcgggctcagagagctcgaacccgggc
agccctcgctccagagtcccgtccccgagcacggagagactggaccggctggtgcgatca
gcctcactgaggagggcgtttggagggagaggctccatctcctctcccgggtggaggcgc
tcctccgtcacgccgcgcatcaccacgttcccgtgtcccggctgtcagcacgacattgac
ctcggggagcgcgggatcagcatgctcttcaggaacttcacgctggagagtatcgtggag
cgctaccgtcaggcggcccgcgcggccgtggccatcatgtgcagtgtgtgtaagccgccg
ctccacgaggccaccaagagctgcatggactgccggaccagctactgcaacgagtgcttc
aagctcaaccacccctgggggacgcccaaagcccagcacgagtacgtgggacccaccacc
aacttcaggcccaaggtgctgatgtgtcccgagcacgagatggagaaggtcaacatgtac
tgtgaggtgtgccggcgtcccgtgtgtcatctctgcaaactcggaggatctcacgctaat
cacagagtcacttccatgagcagcgcctacaagatcctcaaggagaagctgtcgaagagt
atccattacttaattagcaaagaagaccaagtgaggactcagatttctgaactggaaacg
atgatcaatcgcacagaggagaacgggcagctggcggagcggcgggctaacgaacacttc
gagcggctcttcgagacgctgcaggagcgcaggactgagatgctgcggtgcgtggagcag
gccagaaccctgcgagtggaccggctccgggcccaggtggaggagtaccagggcatgctg
gagaacagtgggcttgtgggatacgctcaggaggtgctgaaggagaccgatcagtcctgc
ttcgtccagacggccaaactgctgcacgtcaggatccagaaagccaccgagtccctgaag
accttccaggcttcggcgaccccgtcgtttgaggagtttgtgttggacacgtcgaaggag
gagatcttgctgaaggagctcagcttcggtggagtcccggaccctcccgtgatcgatctc
tcccgctgccgcgtgtacaacgagggcctgatccactggcgtctggctgaggactccctg
cccacggatcgccacgtgcttgagttcaggagggtgtgtgaggaggaggatgatgaagag
tcgcgctggagggccacggagtgtgtgtacggcagtagcactgtggtgtcggatctggcc
ctcgactcgcgttactccttcagggtgaagagcttccgtaacagtgtgtgcagtccctac
agtcctgccgtgaccttccacacgcccccggctccagtgttcgggttcctgtttaacgag
aagtgtggcttcagtgcggagcggctcacgctgagcaagcggcgggactcggtggagagc
gtggcgggcctgagcttcctcttgtgtgcggagcgggtccagaccgggagttatatatgc
ctggactacatcatcggggacacgggcatctctcacggacgccattactgggccttccgt
gtggatcccaactcctacatggtgaaggtgggcgtggcgtccgactgcaagctctccgag
tggttccacaactctcgagactccagcagcccgaggtatgaccaggacagcgggcacgac
agcggcagcgaggacgcgtgcttcgaggcgtctcagcccttcacgctgctgacggtgggc
atgggtcgactcttcgtcccgaaggcctcgctcggcgccggggacatgggccgggttctg
cccgcaccgcagcggatcggggtcctcctggactacgacgccggccgcgtgttcttctac
gacgccgacagcatgcgctgcctgtacgagagggcggtggactgctccggcaccatgttc
cctgcgttcgggctcctgggcggcggctcggtccacctggaggagttcctcacggccaag
cgtctgtcctacatgtga
DBGET
integrated database retrieval system
