Pimephales promelas (fathead minnow): 120475540
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Entry
120475540 CDS
T08155
Symbol
atg2b
Name
(RefSeq) autophagy-related protein 2 homolog B isoform X1
KO
K17906
autophagy-related protein 2
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04136
Autophagy - other
pprm04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120475540 (atg2b)
04136 Autophagy - other
120475540 (atg2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprm04131
]
120475540 (atg2b)
03029 Mitochondrial biogenesis [BR:
pprm03029
]
120475540 (atg2b)
Membrane trafficking [BR:
pprm04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
120475540 (atg2b)
Mitochondrial biogenesis [BR:
pprm03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
120475540 (atg2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG2_CAD
VPS13_N
Motif
Other DBs
NCBI-GeneID:
120475540
NCBI-ProteinID:
XP_039522202
LinkDB
All DBs
Position
Unknown
AA seq
2077 aa
AA seq
DB search
MPWPFSESIKKRACRYLLHRYLGNFLQEKLSLDQLSLDLYQGTGSLAQVPLDKWSLNEIL
ESVDAPFEVSEGFIQAICLTVPWASLLQDNCALEVRGLEMVFRPRPRMASGMEPMCWSSF
MTSSMQLAKECLSQRLTDDQGESFQPLEGLEKFAETIETVLRRVKVTFVDTVLRMEHIPE
NSKIGIALELRINKMVYCDESVEEGSSVNIHQPTTFAHKNLTLDGASVFWDEFSESARAG
PKSSPTQTDTEPKLSPSWNPKIICEPHPQFPEPVSSSTPFEPVQVCSLSGKLELSVVLKQ
NQAMPGAKLDIDGQFDSLIMLLSPQQVHLLLDMFGVFSSSAGQEWSAIGKDRKSRPMQQE
DEYRLHMELNRCLKKDTITGATDQDLFESQTTRTVSSREDVFFSMADMDMSHSLSSLPPL
GDPPTVDLDLSVNSNYSTSLGDSPSGNVTMVWDEYMAVPRQKEKQTNETPQLSRDSQLTH
KLLRQTSHPSKGHCDESRPELVLRLTVGNLCLSVLHIDPLPPPNSSRSHLAPMASEFFHI
LTVNQLPGGGFLQSRTVFDRACPHDHLRFIGQGLKVTYEHCQGSSVRTLNTDLSLSQVEV
LECLYSTDGHTTKSGAHYTELLTFDVPASSESPPPTCLHLHYKLTERRGPQGGQVRLSTI
PRKAELQVELGKVRSECDVSIVDRLNSLLQPQKLVTTEMMASHMYTSYNKHVSLHKAFAE
VFLDDSRTPAHCHMSVSINAPLLVLVVRFPIPDLRSDQERGAWFKKSLQKELLQLELEDL
ELKTEFTGGNSSEQNKMELTFKELSGSFQKDKGHPAARFLRVANTMEEDMTSSDCGKFDW
PRMVLKVNPKAVRSILERVTAEEEEEEADGHSQEEEEEEEGAAHSLKDVCDFGKPEPSPF
SSRRVMYENEEMVIPGDVVEMTEFQDKTMSNSRYILELFFPNVQLSLPNNDFYEKLHNRI
NNDLLLWEPTAPSPVETVENIPYGVGLSVASQLYNTYSKDSFSQFRSTGPEEEESGSEEE
ILQYYTPAELGYRNRRKKRSKIQPKNSQSLFSIVLSVNHGLLALQTHLKQDDSVLQKKHG
EFWMEVKNGTLFGVTQHEGYKDQHYVCFHTSQACLYHHGTVDGDAPEWSVNLPCRTRPHW
LEPVIYATESASERASPSEGLSLEPHSMLSVAVKISSHNTERNVKEFLIAIGMRGVTLEH
RVLPSSLGWYDQIVDFLNVSDEPVLGYTPPSSVSTLHLHLWSCSLDYRPLYLPVRSLLTV
ETFSISSSVSLDHSSSSLRIILDEAVLFLSDKVNAVSVNLARDYVQVVDMGTLELRITAV
KPGADGKMTEPRFELRCSSDVIHIRTCSDSCAALMNLIQYIASYGDLLPPSGMEAKRRST
KQRVKTEAVSRPPAPAPLLPEAEQQILQDLMSDAMEETDSLQSHILQQNGINEDHSHDHE
PPRSDLFLFPDESGNLGQDPSPTYPTLHSPLISPPAPPVLHDSDDFCILDTPGSRIEERD
EEPVVKKLTSEPILVKEEHFGVPLEGSTLNRGPLHFPVPEIRYLVKEISVVWHLYGGKDF
GGGALSSSPARSQGSTPHSSPSQTPVRQVRRGSRAGGGWGRNQDVLMEIQLSKVRFQHEV
YPQMAPEAGLSTEQPVSRQVFSVQDLEIRDRLASSMMNKFLYLYSSKEMPRKAHSNMLTI
RALHVCPEAGQGPQECCLRVSLMPLRLNIDQDALFFLKNFFTSLAADVEMFSPPETEAFC
VSMKKPPGPEVSCSFSKYNGAAAQDPAPIISVPTQSRASPSLVRSGSQDSTAETDTARSF
TDQPIFFREFRFTSEVPIRLDYHGKHMAMEQGTFAGIVIGLTQLNCSELKLRRLCYRQGL
LGVDKLFSYAINEWLNDIKKNQLPGLLGGVGPIHSLVQLVQGFRDLVWLPIEQYRKDGRI
VRGFQRGTASFGTSTAMAALELTNRMVRTIQAAAETAYDMVSPVPDEKECKKIKRYSHYC
LAHQPVDLREGVAKAYSVVKEGITDTALTIYDTATREHEQRGMTGAVGGVLRQLPPAVVK
PLIVATEATSNVLGGMRNQIHPDARQEESQKWRLGEE
NT seq
6234 nt
NT seq
+upstream
nt +downstream
nt
atgccgtggccattttctgagtccattaagaagcgggcctgcaggtacctgctgcatcga
tatctgggaaatttcctccaggagaagctcagtttggaccagcttagtctggatctctat
caaggcacgggctcactcgctcaagtgccgctggacaaatggtccctgaacgagatcctg
gagtctgtggatgcaccgtttgaggtgagtgagggcttcatccaggccatatgtctcact
gtgccatgggcctcgctgctccaggacaactgtgctctggaagtgaggggcttggagatg
gtgttcaggccaagacctcgaatggcgtccggcatggagcccatgtgctggtccagcttc
atgaccagcagtatgcagctggccaaagagtgtctaagccaaagactcactgatgaccag
ggagagagcttccaacctctggagggtctggaaaagtttgccgagactatcgagacggtg
ttgagaagagttaaggtcacttttgtggatactgtcctgcggatggagcacattcctgaa
aattcgaaaattggcattgccctcgaactccgaatcaataaaatggtttactgtgatgag
agcgtggaggagggctccagtgtcaacatccaccagcctactacatttgcacataaaaac
ctcactctggacggagcctctgtgttctgggacgagttttcagagtcggcacgtgccggc
cccaaatcatcgcccactcaaacagatactgaacccaagctttcaccaagttggaatcca
aaaatcatctgtgagcctcaccctcagttcccagagccggtgtcttccagtacaccattc
gagccagtacaggtgtgcagccttagtgggaaactggagctgtctgtggttctgaagcaa
aaccaggctatgccaggagctaagttggatattgacggacagtttgattctctaatcatg
ctgctctcaccacaacaagtccacctcttactggacatgtttggggtcttctccagctca
gccgggcaggagtggtctgcaataggaaaggacaggaaaagtcggcccatgcagcaggag
gatgagtatcgcctccacatggagctcaaccgctgcctgaagaaagacaccataacaggt
gccactgaccaggacctgtttgaaagccagaccaccagaacggtgtccagcagagaagac
gtctttttctccatggctgatatggacatgtcacacagcctatcatctctgcctcctctt
ggagatccacccacggtggatctagatttgtctgtaaatagcaactactccacctccctg
ggggattcgccatcgggaaatgtaacgatggtgtgggatgagtacatggcagttcctaga
cagaaggagaaacagacaaatgagacaccacaactttccagagattctcagcttacccac
aagttgctacggcagacgtctcatccatctaaaggccattgtgatgagtccaggcctgag
ctggttctcaggctgacagtgggcaatctctgcctgtctgtcctccatatcgaccccctc
ccacctccaaactcctcccgcagccatcttgcaccaatggcttctgagtttttccatatt
ctgactgtaaatcaactccctggtggtggtttcctccaatcacgaaccgtttttgatcga
gcctgtccacatgatcacctcaggttcattggccagggattaaaggtgacatacgagcac
tgccaaggctccagtgtacgtacgctgaacacggatctctctctgagtcaggtggaggtt
ttggaatgcctgtactcgactgatggccacactacaaagagtggagcccattacacagag
cttctaacgtttgacgtcccagccagtagtgaatctccccctcctacatgcctacattta
cactacaaactaacagaacgcagaggcccgcagggcgggcaggtacgcctgagcactata
cctcgtaaggcagaattgcaggtggagctgggtaaagtgcgctcagagtgtgacgtcagc
attgtggaccggctcaactccctactccagcctcagaaactggttacaacagagatgatg
gcatctcacatgtacacctcctacaataaacatgtcagtctgcacaaagccttcgcagag
gtcttcctggatgatagtcgcaccccagcgcactgccacatgtctgtgtcaataaatgca
cctctactggtactagtggtacggtttcctatcccagacctgcgctcggatcaggaaagg
ggcgcctggtttaagaagtccctgcagaaagagctgcttcagctggagctggaggatctg
gagcttaagacggagttcaccggaggaaactcatcagagcagaacaagatggagctcact
ttcaaagagctcagtgggtcatttcaaaaagacaaaggtcaccctgctgccaggttctta
cgagtagctaacaccatggaggaggacatgacatcgtccgactgtggtaaattcgactgg
cccagaatggttttgaaggtgaaccccaaggctgtgcgctccatcttagagcgtgtaaca
gcggaggaagaggaggaagaagcagatggccactcacaggaggaagaggaggaagaagaa
ggagctgcccactccttgaaggatgtgtgtgattttggcaaacctgagccgtcccctttc
tcctcccgacgtgtcatgtatgagaatgaggagatggtcattccaggagacgtggtggag
atgacagaattccaagataaaaccatgagcaactcccgctacatccttgagctgtttttc
cctaacgtgcagctctctttgcccaataatgacttttatgagaaactacacaacaggatt
aataacgacctgttgctatgggaacccaccgctccatctccagtcgagacagtggagaac
atcccgtatggggtgggtctgtctgtagccagtcaactctacaacacgtacagtaaagac
agcttcagccagtttagatctactggccctgaggaggaagagagtggctctgaggaagag
atcctgcagtattacacccccgctgaactgggctataggaacagaaggaagaagaggagt
aagatccagcctaagaactctcagagcctcttttccatcgtcctgtctgttaaccacggc
ctgctggctctacaaacacacctaaagcaggatgatagtgtactacaaaaaaaacacggt
gagttctggatggaggtgaaaaacgggacgctgtttggcgtgacgcagcacgaaggctac
aaagaccagcattatgtctgcttccacacgtctcaggcctgcctctatcaccacggcacg
gtggacggggatgccccagagtggagtgttaatctgccctgcaggacgcgtcctcattgg
ctggagcctgttatatatgcgactgaatcggcctcagagagggcgtctccctcagaaggg
ctcagtctggagccccacagcatgctgtctgtcgctgttaaaatatcctcccacaacact
gagcgcaatgtcaaggagtttctcatagccattggcatgaggggagtcacgctggagcac
agagtgttgccttcaagtctgggctggtatgaccagatagtcgactttttaaatgtgtca
gatgagccggtgcttggctacactcccccttcatctgtgtccaccctccacctgcatcta
tggagctgctccctggattatagacctttgtatttacccgtgaggtctctgctgacggtg
gagacctttagcatctccagcagtgtgtctttagatcactcttcctccagtttaagaata
attttagatgaagctgtattgtttctttctgacaaagtcaacgctgtgtctgttaatctg
gcacgagattatgtgcaggtggttgatatggggaccctggaactgaggatcactgcagtc
aaaccaggagcagatggcaaaatgacggagccaaggtttgagttgcgttgctcaagtgat
gttattcacattcgcacctgttcagactcctgtgccgctctcatgaaccttattcagtac
atagccagctacggagatctgctgcccccttctggaatggaggccaaacgtagaagcacg
aaacaaagggtgaagactgaagcagtgagccgtccaccagctccggcacctctacttcct
gaagcggagcagcagattcttcaggatctgatgagtgatgctatggaagagacggacagc
ctgcagagccatattctgcaacagaacggtatcaacgaagaccattcacatgatcacgag
ccaccccgttctgatctcttccttttccctgatgagagtggaaacctggggcaggacccg
agtcccacgtacccaaccctgcactcgcccctcatctctcctcctgccccccctgtgctc
cacgactctgatgacttctgcatcctggacacgccgggctccagaatagaggaacgggat
gaggagcctgtggtaaagaagctaacctctgaacctatcctggtgaaggaagaacatttc
ggtgtccccttggagggcagcactttaaatagggggccgcttcatttccctgtgccggag
atcagatacctggtcaaagagatctctgttgtgtggcatctctacggaggaaaggacttc
ggtggtggcgcgctgtcctcctcaccagctcgcagtcaagggagcactcctcacagttct
ccgtcacagactcctgtaagacaggtgaggagaggctctcgtgctggaggaggatggggc
agaaaccaagatgttctgatggagattcaactcagtaaggtgcggttccagcatgaggtg
tatcctcagatggctccagaggcaggcctttcgacggagcagccggtgtccagacaggtg
ttctcagtgcaggatctggagatacgagacaggctggcctcttccatgatgaacaagttc
ctctacctgtactccagtaaagagatgcccaggaaagctcactctaacatgttgaccatc
agagccctacacgtgtgtccggaagctggacagggacctcaggagtgctgtctacgtgtg
tcattaatgcccctccgtctgaacattgatcaggatgcgttgttcttcctgaagaacttc
ttcaccagtctggcagcagatgttgaaatgttttcccctccagagacagaagcattctgt
gtgtcaatgaagaagccgcctggccccgaagtttcctgcagtttttccaagtacaacggt
gcagcggctcaagaccctgcgcccatcatctcagtgccaacacaaagccgtgccagtcca
agcctcgtccgctccggcagccaagacagcactgctgagacggacactgccagatctttc
actgaccagcccatattcttcagagagttccggttcacttcagaggtgccaattcgatta
gactaccatggaaaacacatggccatggagcagggcacatttgctggtattgtgattggg
ctgacacaactgaactgctcagagcttaaactacgacgcctgtgttacagacaaggatta
ttgggtgttgacaaactcttttcatatgccattaatgagtggctgaatgacataaagaag
aaccagttgccggggcttctgggaggcgtgggacccattcattccttagtgcagctagtt
cagggttttagggatctagtttggctgcccattgagcagtaccgtaaggatggaagaata
gtgcgtggcttccagcggggcaccgcttccttcgggacatccaccgcaatggccgctctg
gagctcaccaatcggatggtgcgaacaatacaggcggcagctgaaacggcttatgacatg
gtgtctccagtcccagatgagaaagaatgcaaaaagattaaacggtactcgcattactgt
ctggcccatcagccagtggacctcagagagggggtggccaaggcatatagcgtagtgaaa
gagggcattaccgacacagccctgaccatttatgacactgcgacccgtgagcatgagcag
aggggcatgacgggcgctgtgggcggagtcctgcgccagcttcctccagctgttgttaaa
cctcttatcgttgccacagaagcgacgtccaatgtgctgggaggcatgaggaaccagatc
cacccagatgcacgtcaggaagagtcccagaagtggcgcttgggtgaagagtga
DBGET
integrated database retrieval system
