Pimephales promelas (fathead minnow): 120475819
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Entry
120475819 CDS
T08155
Symbol
jmjd1ca
Name
(RefSeq) probable JmjC domain-containing histone demethylation protein 2C
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pprm03036
]
120475819 (jmjd1ca)
Chromosome and associated proteins [BR:
pprm03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
120475819 (jmjd1ca)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tudor_KDM3B
PWWP_KDM3B
DUF7030
JmjC
FYVE
C1_2
Motif
Other DBs
NCBI-GeneID:
120475819
NCBI-ProteinID:
XP_039522507
LinkDB
All DBs
Position
Unknown
AA seq
2552 aa
AA seq
DB search
MALELVGKRCLCASGGGSLELASISRWDWRSGVICATSDTPALLTVCVHWDGEQSAERKW
RRLREECEVVLLEQELVWAARRTGSSGSGSAQEKRRLQPALRFQPLIGQSCVGGLSVVEF
ISDRQLEFYTEKEELQPFEDEVGDGNPAVRDDPSLQEQVQAWLKQNQFQNILQKGACSLK
GLRVKVFRQESKTQWLSGVITHHDQNNRTVAVMADQVREIVNVDPSLVQMVLLDDITHSS
LMEDHSKRKSHITKINRIFLGTESISNNTTTNDQVCSSRPVQQQSAPSAQNCSMEEDEKE
GMRDEKRSDDGRDSSKSKNGNGERKRRKEDEGKDDKQRKRLKRLKAGSLSEQSENSDSEN
SSCRVQDSSSDSGSKKQLKQRYTSKRTLDCEVHPSHKGGEPSPSQVGDSETQKLRKTPPS
DASASCNGAFSNTEAQECAAGVSVGKSDEKGDGGMTEIVDRSEGASLEDSEAVSALLASQ
ESEQLVSIETTCVLLHASPQECEGADGEHEMSTNDPEVKRPEFTDAEARGSDFNQSEVRS
SEFPQSVAITTSNNTAVTVEEEPRVAPSRSPVKPCSKKEDVDSKQRCSPEYGPVISLEAT
HKHSVQASPCSSPEIISKAQTVWEMSRQKQGASLEMGLLKEDTPRPKSMDRTLSCLKMAP
NPKVTCSTTPSPSPNQSRTPTLSPPGTPNCTPTPDKSTKSPLIVDRKDPFTIYRDPAMVR
AELEAHPTYIQPPHTPPNPKHHLKTPSPSSSSPSLTPASSHSKLLSPSPHLSPIPLHSQP
PLCSLSTPHSTIPHPHLLPSLLHALPPSAAILAGHPRIGSLGLPHHPLALPGNSSLLGQT
TGAASLAHLGLYPLLWPPFPNGAHSYPGLDVRRNPPSPWLSQPNPVTNADGQGMQPPLPI
RPSSADPQRASRSTQHCMPSSKTTEELDRRAATESTVIHTHFKSEQERVRAAMGKNGLTY
SPGAPESPPSRNKQPLVVYDLTGERPNRYQEENRRILLESSEVAPFTAKLSSDRELRYTR
SPTSTLPSKERESEMDRERDQDRERNVHAFRHTLPPRPQSAHPTPTLTPSSYYSLPASKE
LYERLSASNTAAPVLTSSSSQVSMRARPPPLIKRHHEKEEGLLGKITEQLAHKASSMMAL
EVATVERRGQGSSLISVSSSPRSVPLLHRAPIFHPPAPNLLVSKDSGHGRLSPPTLTPIQ
PMSLSGKGQKQQRPPTLLPELKHVRPVPEKATSSQTWDTQWGGVMFDREKVGGGHTTNGG
VVKPKSATASVIVHTTSHTHTTINYSVSDSSVSRMQCGHIKPLESVSNPHSKEGSVQYKR
GVLWTPMDTVHPINMTTQKGDLSTPINMTTKPINTAQPTHPLTNMSATCSRIDLIAEHCK
RRDGGAGQIKMEPSPTSCCTSREFPHLKKHRAGLATAESRLNTHTIQPQHTTHPSDALKH
TSYLSNSRNGTYTTLATHTVCSTHAQSVFNASTSECLRLASGTSSPIATTTQGLLSNEQI
PAFAVTNQSTQFSQNNCHKLKKAWLTRHSEQDRESTASQTLDGTKTAVTLTSTSSSVPIK
QEVNGLVDNWCTQEDKESSLDSRKSKIIDKKSSLEDRKSNSSATSFNSEDKKSVKATEKP
VTAGKKSSSDDVKPLLDRNGKLESKEAFVEDKKPNERRSTSLQKQGEKRPLESSGDSESG
GDSGNESESGGSGQRFKRQSKSSFKIKPNDSQKKKVDKEEEEEAKPNGTLQSAKDKPQQR
LANSNGIPRSVLKDWRKVRKLKQTGETFLQDDSCSEVGPNVQKCRECRLDRSRKSHEPAI
SPVFCRFYYFRRLSFSRNGVVRADGFSVSEQTDEEAVTVWTRSSEDAEDKKRKEMDLEMS
KTVLTFIGDKFCQLIKTEDIAFTWVKKDTQIMWKRAVRGVREMCDACEATLFNMHWACHK
CGFVVCMDCYKAREEKKPKDKEMYVWVRCVKNQPHDLKNLMPTQIIPETVLMDMLSSMHL
MKEKFGISSHCPNKSLNPSMATTNGLSLLSDRDKSDLKSRQIPDQQKNSQLRAHTERREK
AECDGMEAHSRKSMSSEQGSTLRDLLTSTAGKLRLGSAGGAFAPVFNLSEQVTQNTRMPN
ILDDIIASVVENKIPATKMTRTGLNQDLMPEEEMGQRPEGVKLDESPLADAHTAVPHDWL
GNHRLLWLKNHLHQGNQILFKENWTQEQPVLVSGLHKSLNANLWKPEHFSHEFSSLHSDL
YNCRDGSVTNSKVKEFWDGFEDVSKRPKSAKGESVVYRLKDWPSGEEFLALMPARYHDVM
KSLPVPEYTDPEAHLNLASHLPSFFIRPDLGPRLCCAHGITACPEQDFGTSNLHVEISDT
MSILVYVGVAKGNGAPSKAGVLKLLEGEFLDESVKKRLKDPNEMPGALWHIYMSKDLQKI
QEFLQKVAAEQQTEADPGTDSDSEWDGDADPLREGGWYLSPRLRQKLQEEYGVESRTLLQ
FHGDAVIIPAGALHQVMNLHSCIQVNVDFVSPEHAHNSYYLTQELRPLKDQVNYEDKLQV
KNIFYHSVKDAVATLRKHLKEKDTDEVKQEES
NT seq
7659 nt
NT seq
+upstream
nt +downstream
nt
atggcgctggagctggtgggcaagcgctgcctgtgcgcgagcggcggagggtctctggag
ctcgcgagcatctcgcgctgggactggagatccggagtcatctgcgcgacctctgacacg
cctgctctgctgacggtgtgtgtgcactgggacggcgagcagagcgcggagaggaagtgg
aggagacttcgagaggaatgtgaggtggttttgttggagcaggaactggtctgggccgcc
agaagaaccggctcaagcggcagcggcagcgcccaggagaagaggagactgcaacccgcc
ctgagattccagcctctgattggtcagtcatgcgtgggaggcttgtcggtggtggagttc
atctctgacagacagctggagttctacacagaaaaggaggagctccagccattcgaggat
gaagtgggcgatggaaatccagctgtgagggatgatccgtctctacaggaacaggttcag
gcctggctcaaacagaaccaattccagaacattcttcagaaaggtgcttgttctctaaag
ggccttagagtgaaagtgttcagacaggagtccaaaactcagtggctgtctggagtcatc
acacaccacgaccagaacaacagaactgtagctgtcatggctgaccaggttcgagagatt
gtgaatgtagatccttcgctggttcagatggtgttactagatgatatcacccactcctcg
ctaatggaagaccactcaaaacgcaaatcacatatcaccaagatcaataggatttttctt
ggcacagaaagcatatcaaacaacactacaacaaatgaccaggtgtgtagctccaggcca
gtgcagcagcagtctgcaccgagcgcacaaaactgcagcatggaagaggatgaaaaagaa
gggatgagggacgaaaagaggagtgatgatggaagagattcttctaaatctaaaaacggc
aatggtgagaggaaacggaggaaagaagacgaggggaaagatgacaagcagagaaagaga
ttgaagaggttgaaagcggggagtttgtccgaacagtctgagaacagcgattctgaaaat
tccagctgcagagtgcaggattcatcctcggattcaggatcaaagaaacagctgaaacag
cgttacacttcaaagaggacattggactgtgaggttcacccctcacataaaggtggggaa
ccttctcccagccaagtaggagatagtgagactcagaaattgagaaaaactcctccatcc
gatgctagtgcttcctgcaatggggcatttagtaacacagaggcgcaggagtgtgctgcc
ggtgttagtgttggaaaatcagatgagaaaggtgatgggggaatgacagaaatagtggac
cggagtgagggggcgtctctagaggactcagaggctgtgtctgcactgctggcatcccaa
gagagtgagcagctggtctccattgaaaccacatgtgtgttgctacatgcatcacctcag
gagtgtgaaggagcggacggtgagcatgagatgtcgacaaatgatccagaggtcaaaagg
ccagagttcaccgacgctgaggctagggggtcagactttaaccaatcagaggtcaggtcg
tcagaatttcctcaatctgtggccattaccaccagcaataacactgcagtcacagtagaa
gaggagccaagagtagcaccttctcggtctcctgtcaaaccttgcagcaaaaaggaggat
gtggactctaaacaaagatgttccccagaatatggacctgtgatttctttggaggcaacc
cacaagcatagtgtgcaggctagtccttgctcctctcccgagatcatatctaaagctcag
actgtatgggagatgtccagacagaagcagggtgcgtctctagagatgggactgttgaaa
gaggacactcctcggcctaaatcgatggacagaacgcttagctgccttaaaatggcaccc
aatccgaaagtgacctgctccacaactccttctccatccccaaaccaatccagaacccct
acactttctcctcccggtacgcctaattgcactcccactccagacaagtccaccaaaagt
cccctcattgtggacagaaaggatcccttcactatatacagagaccctgcgatggtcagg
gcggagcttgaggcccaccccacctacatccagccccctcacactcccccaaaccccaaa
caccacctaaagacgccatctccctcctccagctcacccagccttacccctgcttcctcc
cacagcaagttactgagtccctcccctcatctctcgcccattcccctccactcccagcct
cccctttgctccctgagtacaccccactcaaccatccctcacccgcacctccttccatcc
ctcctgcatgcactgcccccatctgccgcaatcttggctggacatcctcgtatcggatcc
ctgggacttcctcaccatcctttagcccttccgggtaactcatctcttctgggccagacc
actggtgcagcttctttggcacatcttggcctctatcccctcttgtggcctcctttcccc
aatggagcccatagctaccctggactggacgtgaggaggaatcccccaagcccttggctt
tctcaacccaaccctgttactaatgcagacggtcaagggatgcaacccccactccccatc
cgaccctccagtgcggaccctcagagagcatctaggagcactcaacattgcatgccttcc
tccaaaaccacagaagagctggatagaagagccgccactgagagcacagtcatccacact
cacttcaagtctgaacaggagcgtgtccgtgcagcgatgggcaaaaatgggctgacttac
tccccaggtgcccctgaatcacctccaagtcgaaacaaacagccacttgttgtttatgat
ctcacaggtgagagacctaaccgctaccaggaagagaaccggcgcattcttctggagagc
agtgaggtcgctccgttcactgctaaactgagctcggatagggaactgcgatacactaga
agtcccacttctacccttccttccaaggaaagggagagcgagatggacagagagagagac
caggacagagagagaaatgtgcatgcattcagacacactcttcctccccggccacagtcg
gcccatcccaccccaaccctcactccgagcagctactactctttgccagctagcaaagaa
ctctacgagaggctcagtgccagcaacacggctgcccctgtcttaacttcttccagctca
caggtctcaatgagagccagacccccgcctctcattaaacgccaccacgagaaagaagaa
ggtctcctgggaaagatcacagagcaacttgcacataaagcatcttccatgatggcatta
gaggtagcgactgtggagagaagggggcaaggctcttctctcatttctgtctcctctagt
ccccgcagcgtgcctttactccaccgtgccccaattttccaccctccggcaccaaacctt
ctagtttctaaagactctggacatggcagattgtccccgcctactctcacacccattcag
ccaatgagcttgtctggaaaaggtcagaagcaacagaggccacccaccctgttacccgag
ctcaaacatgtcagacccgtgccagagaaagcaacgtcatcacaaacctgggatacccaa
tggggtggagtcatgtttgacagagagaaagtaggtggtgggcacacaacaaatggaggt
gtagtcaaaccaaagtcggccactgcgtcagtcattgtacatacgacaagtcacacacat
accacaataaattactcagtgtctgacagctcagtttcccggatgcagtgcggccacata
aagccattggaaagtgtgtccaacccacactctaaggagggcagtgttcagtataaaaga
ggtgtcctgtggacccctatggatactgttcaccccatcaacatgacgacccaaaaggga
gacctcagcacacccataaacatgacaactaaacctattaacacagctcaaccgacacac
cccttaacaaatatgagtgccacatgctctaggatagacctaatcgcagaacactgcaag
aggagagacggtggagccggtcaaataaagatggagccatctcccacctcttgttgcact
tctagagaattccctcatctgaagaaacacagagctggactagccactgctgaatctaga
cttaacacgcatacaattcagcctcaacacactacacatccttcagatgctttgaaacac
acctcttacctctcaaatagtaggaatgggacttacactacactcgctacacatactgtg
tgttctacacatgcacagtctgtattcaacgctagcacttctgaatgtctccgactggca
tcagggacttctagccctatagcaacaaccacacaaggtttgctatccaatgagcagata
cccgccttcgccgtaacaaaccagtcaactcaattcagtcagaacaactgccataaactg
aaaaaagcctggctgacccgccattctgagcaagatagagaaagtacggcctcccaaaca
ctagatggcactaagacagctgtaactttgaccagcacaagctcctctgtgccaatcaaa
caggaagtgaatggactggtggataattggtgcactcaggaggacaaagagtcctcctta
gacagcagaaagtccaaaataatagacaagaagtctagtttagaggacaggaagtctaat
agtagtgctacaagtttcaattcagaggacaaaaaatcggtcaaagccactgagaaacca
gtgaccgcgggcaagaagtcttcctcggatgatgttaaacctctcttggacagaaatgga
aagctggaaagtaaggaagcctttgtggaggacaagaaacctaatgaaagacgatcaacc
tctctacagaaacaaggcgagaaacggccgttagagtccagcggcgacagcgaaagtgga
ggagactccggcaatgagagtgagagtggtgggtcaggacagaggtttaaacggcagtcc
aagtcctcttttaaaataaagccgaatgacagccagaagaagaaagtagacaaggaagaa
gaggaagaggccaaacccaatggaactctgcaaagtgcgaaggataagcctcaacagagg
ctcgcaaacagcaatggcatccctcgctctgtgctgaaggactggagaaaggtgagaaag
ctcaagcaaactggagaaactttcttgcaagacgactcctgttcagaggtcggccccaac
gtgcagaagtgccgagagtgtcgcttggatcgctctcgtaaatctcacgagcctgccatc
tcacccgtcttctgccgattttactacttccgacgtctgtcgttcagtaggaatggcgtt
gtccgtgcggatgggttttcggtgtctgagcagacagatgaggaggcggttaccgtgtgg
acgaggagctcagaagatgccgaggacaaaaagaggaaagagatggaccttgaaatgtca
aaaactgtcctcacgttcatcggagacaagttctgtcagctcataaagacagaggacatt
gctttcacctgggtcaagaaagacactcagatcatgtggaagcgagcggtgagaggtgtg
agggagatgtgtgatgcgtgtgaggccactctcttcaacatgcactgggcatgtcacaaa
tgtggcttcgtggtttgcatggactgctacaaagccagggaggagaagaaacccaaagat
aaggagatgtatgtctgggtccgatgcgtgaaaaaccagcctcatgacctgaagaaccta
atgcctacacagattatacctgaaacggtgttgatggacatgctgagctcaatgcacttg
atgaaagaaaagtttggaatctcatcccattgtcccaacaaatccctcaaccccagcatg
gccactaccaacggactctcactactttcagacagagataagagtgacttgaagagccgg
cagatcccagatcagcagaagaactcgcagctgagagcacacactgagagaagagagaag
gccgagtgtgacggtatggaagctcacagtaggaagtccatgagctccgaacaaggatca
acattgcgtgaccttttgacctccacagctgggaagctacgtcttgggtccgctggaggt
gcctttgcgccggttttcaacttgtcggaacaggtaacccagaacactcgcatgcccaac
atcctggatgacatcattgcttctgtggtagaaaataagattcccgctacaaagatgacc
agaacggggctgaatcaggatttgatgccagaggaggagatggggcagcgaccagagggg
gtgaagcttgatgaaagcccattggctgatgcccatactgctgtccctcacgattggcta
ggaaaccaccggctgctttggctcaaaaatcaccttcaccagggcaaccaaatactgttc
aaagagaactggacacaagagcagccggtgctggtgtccggattgcacaaaagtctgaat
gctaatctgtggaaacctgaacacttcagtcatgagttctccagcctccacagtgacctc
tacaattgcagagacgggagcgtcacgaactccaaggtcaaggagttctgggatggtttt
gaagatgtgtcgaagaggcctaaatctgctaaaggagagtcagtggtgtatagactgaaa
gactggccatcgggggaggagtttttggcactcatgcctgccagatatcatgacgtgatg
aagtctttgccagtaccagagtacacagacccagaggctcatctgaacctggcctctcat
ctgccctccttcttcattcgacccgaccttggtcctcgcctttgctgcgcccacggtata
acagcatgtccagaacaagatttcgggaccagtaatctacatgttgaaatctcagacacc
atgagtattctggtatatgtcggggtggccaaaggaaacggagccccatccaaagcaggt
gtattgaagctattggagggggaatttctggacgagagtgtaaagaaacgactaaaagac
cctaatgagatgccaggtgctctgtggcacatctacatgagtaaagacctacaaaagatc
caggagttcctacaaaaggttgctgctgagcagcagactgaagcagatcccgggacagac
tcggactcggagtgggacggtgatgccgaccccctgcgtgagggaggctggtatctgagc
cccaggctgagacagaagttacaggaggaatacggcgtagagagtcgcacactcctccag
ttccatggagatgctgttattatccctgctggagctctgcaccaggtgatgaatctgcac
agttgcatccaagtgaatgtagactttgtgtctcctgaacacgcacacaactcctattat
ctaactcaagagctccgccctctcaaggaccaagtgaactatgaagacaaactccaggtg
aagaacatcttttatcactctgtgaaggatgctgtggccacattgaggaagcatttaaag
gagaaggacacagacgaggtaaaacaggaggagtcctga
DBGET
integrated database retrieval system
